FFCP PHASE1:Mm9::chr3:104591711..104591759,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11853 | |EntrezGene=11853 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q62159 | |UniProt=Q62159 | ||
|association_with_transcript=-169bp_to_ENSMUST00000002303_5end | |association_with_transcript=-169bp_to_ENSMUST00000002303_5end | ||
|cluster_id=chr3:104591711..104591759,+ | |||
|description=CAGE_peak_2_at_Rhoc_5end | |description=CAGE_peak_2_at_Rhoc_5end | ||
|id=chr3:104591711..104591759,+ | |id=chr3:104591711..104591759,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.65e-12!50;CL:0000221!4.04e-10!44;CL:0000133!4.04e-10!44;CL:0002319!1.24e-09!43;CL:0002321!8.82e-09!70;CL:0000220!8.82e-09!70;CL:0000333!1.26e-07!10;CL:0000095!1.26e-07!10;CL:0000243!1.26e-07!10;CL:0000123!1.26e-07!10;CL:0000125!1.26e-07!10;CL:0000030!1.26e-07!10;CL:0000339!1.26e-07!10;CL:0000107!3.43e-07!9 | |ontology_enrichment_celltype=CL:0000055!3.65e-12!50;CL:0000221!4.04e-10!44;CL:0000133!4.04e-10!44;CL:0002319!1.24e-09!43;CL:0002321!8.82e-09!70;CL:0000220!8.82e-09!70;CL:0000333!1.26e-07!10;CL:0000095!1.26e-07!10;CL:0000243!1.26e-07!10;CL:0000123!1.26e-07!10;CL:0000125!1.26e-07!10;CL:0000030!1.26e-07!10;CL:0000339!1.26e-07!10;CL:0000107!3.43e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.35e-10,44;CL:0000133,5.35e-10,44;CL:0002319,1.67e-09,43;CL:0002321,2.91e-09,70;CL:0000333,9.25e-08,10;CL:0000095,9.25e-08,10;CL:0000243,9.25e-08,10;CL:0000123,9.25e-08,10;CL:0000125,9.25e-08,10;CL:0000030,9.25e-08,10;CL:0000339,9.25e-08,10;CL:0000107,2.57e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.59e-08!11;UBERON:0002410!3.43e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.83e-08,11;UBERON:0002410,2.57e-07,9;UBERON:0004535,8.39e-07,23;UBERON:0001009,8.39e-07,23 | |||
|phase1_expression=5.92550734287738,8.02643437570531,15.0149748998547,4.83942738090928,5.00895729946347,5.20425742926858,4.43864017131499,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,1.61582251287033,0.0992909512008853,0,5.43974237497583,5.27641346454491,5.7423196411502,6.8921919385452,6.89507944594845,5.51067916423484,6.80481350351813,3.76941868114018,0,0,0,0,0,0.204169356262369,0,0.7813353445238,0.523523743973798,0,0,0,5.28766635497425,3.95370031756107,2.75320128242522,64.1560902365392,14.8257106338704,15.378032791413,25.4703167787311,16.0984384869167,15.8127820801469,0,0,0,7.97504251711436,10.8882707176728,14.9544906760458,2.22548106945558,1.05798195854407,2.53532561402472,16.6033820713875,21.3430751066673,6.74924787961049,6.92206453796882,7.104801149461,13.4820049733282,16.9056054341484,1.14058573539325,1.08004750665353,2.10324961351382,5.99867067247988,5.96345060569357,0.61245399607477,1.24599112323707,0.919218786610021,2.20231761998777,2.80912143787413,2.76491759861238,1.71452174049252,1.18933936683133,2.6045668527838,3.35019598801657,2.8138130501584,2.59757021220577,7.66034322231536,5.83723891276322,1.86399445825301,12.9491790599745,14.5097395405028,12.7540375028738,4.30211938490693,0,0,0,0,0.702222100658759,5.45377032249785,9.61208217030615,7.0667914902068,12.2533775205712,0,5.09610479413291,7.11066703153331,0.649473123033642,0.760079596425296,1.01104889002957,1.48439043634778,0.517875767294343,1.03909497345377,2.25530924795977,1.82679286987285,1.61430848079241,1.80867168663147,3.41007250693544,0.879666139307728,1.97755974187499,2.4581890676385,0.884610551949874,2.75003644910596,2.42925670306433,1.93950101254089,14.9113408974498,0.878342391034642,1.04723353406728,3.83185582812887,0.239630249011841,0.599902730993408,0.127070227073065,1.49790639404823,0.457500602818626,0.753926112677186,0.869121600961382,1.02286182932132,1.0389402227978,1.29793010454206,3.86989582631202,1.7416975885413,4.0435641349388,0.841767423545896,1.95180664444056,2.75882525320168,2.88099407688559,1.50704817835715,2.24520447199382,2.3060469651273,2.15513966487376,2.84573707812917,1.29340795759705,2.08016688184601,2.99116911078713,2.84954452155847,4.44875598760957,3.1342694986995,3.2925141825271,2.58744546864041,0,0,0,3.52113813310353,4.69052119962192,3.42117916775928,2.60419209143731,3.73852040320067,2.62254091908543,3.72054311600653,4.82892122519315,3.73649095574942,3.62031669809657,4.76085645829376,3.32382119138008,1.90059983652932,5.48875288227627,3.75777972529041,0.630869845692382,1.64647379806855,8.59088835757875,14.0158800331678,1.70630600428187,2.09013004674395,2.44848176511977,2.8235693447268,2.44615848229357,2.66315876557583,1.89811624617805,5.43506550589236,3.51869292320377,3.78017296878187,4.48417400373976,5.39291645192533,2.59365659849633,4.97853183135918,3.03468641524931,1.82797620175566,2.25415471346161,1.4255592949172,0.581857461502877,1.61312385747733,1.26473074248515,1.03327103585722,0.31399745568275,2.09775178667061,0,0.83422552858047,0.196558995113203,0.224862112384854,0.608580364165509,0.241177159752417,1.01850340712568,0.575392274901621,0.810676133875177,0,2.87536413054709,2.97712758134803,2.18426371180192,1.76805214562978,1.25578189465339,0.482443521363367,3.14080423283228,2.65287976478679,1.95557971730431,1.69745085775188,1.40814148973101,3.1826188913945,1.90434912708811,3.51240566144038,4.25614889086716,5.97954662051692,4.78364305972461,1.96635977658886,2.59027472798843,3.18227928879325,0,1.63171705145613,0.983528546038072,1.65562047782839,1.12385412991454,2.10981035865966,9.01642199571715,2.01976741763498,19.2460013843917,17.5697434933487,20.0343759891503,20.5513166239195,18.7150886229211,19.2492040936406,13.3587531552715,18.1198631905013,10.6727700045561,1.92792789853084,2.2710413633323,2.67098405500883,3.09485222771795,3.13443233647817,0,1.45668381692989,1.51161778482376,0.565815239267694,1.18120757152309,1.22974059177571,3.10113951801865,1.09060118843252,0.356497378384721,1.26414703174326,0,1.03135543248187,1.02131881726136,1.98067203434441,3.49268446213437,1.50035924522115,1.59606210278046,1.96205699362278,3.1264313914403,2.43571959291679,4.22409074514679,4.44847348814022,0.661585194164886,0.98931751764888,2.58343082713449,2.5934557719107,1.67121281604391,0.820704498725306,3.49777003955821,0.927126510052548,0.683483523191411,2.68302928352189,1.29636169158798,0.376736914009382,0.683471138605126,0.457556346413045,0.169978429993855,0.559805809294632,0.829199842826543,6.68269432610579,3.16335993581135,2.43983360552218,2.16010681643603,2.50905955217362,3.05707589244649,2.83215127408124,3.30613822901344,3.40282724579238,8.94343315713371,0,0,1.64468200648377,1.65458490457098,1.16670713006429,1.42075805825504,2.19642963138012,2.34714477291508,1.8228613878153,1.46803082195995,0.483168241652012,0.864090018773596,0.316011120628178,0.608175645870493,0.821687657318618,0.649604114888975,0.895133478337407,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331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| |phase1_expression=5.92550734287738,8.02643437570531,15.0149748998547,4.83942738090928,5.00895729946347,5.20425742926858,4.43864017131499,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,1.61582251287033,0.0992909512008853,0,5.43974237497583,5.27641346454491,5.7423196411502,6.8921919385452,6.89507944594845,5.51067916423484,6.80481350351813,3.76941868114018,0,0,0,0,0,0.204169356262369,0,0.7813353445238,0.523523743973798,0,0,0,5.28766635497425,3.95370031756107,2.75320128242522,64.1560902365392,14.8257106338704,15.378032791413,25.4703167787311,16.0984384869167,15.8127820801469,0,0,0,7.97504251711436,10.8882707176728,14.9544906760458,2.22548106945558,1.05798195854407,2.53532561402472,16.6033820713875,21.3430751066673,6.74924787961049,6.92206453796882,7.104801149461,13.4820049733282,16.9056054341484,1.14058573539325,1.08004750665353,2.10324961351382,5.99867067247988,5.96345060569357,0.61245399607477,1.24599112323707,0.919218786610021,2.20231761998777,2.80912143787413,2.76491759861238,1.71452174049252,1.18933936683133,2.6045668527838,3.35019598801657,2.8138130501584,2.59757021220577,7.66034322231536,5.83723891276322,1.86399445825301,12.9491790599745,14.5097395405028,12.7540375028738,4.30211938490693,0,0,0,0,0.702222100658759,5.45377032249785,9.61208217030615,7.0667914902068,12.2533775205712,0,5.09610479413291,7.11066703153331,0.649473123033642,0.760079596425296,1.01104889002957,1.48439043634778,0.517875767294343,1.03909497345377,2.25530924795977,1.82679286987285,1.61430848079241,1.80867168663147,3.41007250693544,0.879666139307728,1.97755974187499,2.4581890676385,0.884610551949874,2.75003644910596,2.42925670306433,1.93950101254089,14.9113408974498,0.878342391034642,1.04723353406728,3.83185582812887,0.239630249011841,0.599902730993408,0.127070227073065,1.49790639404823,0.457500602818626,0.753926112677186,0.869121600961382,1.02286182932132,1.0389402227978,1.29793010454206,3.86989582631202,1.7416975885413,4.0435641349388,0.841767423545896,1.95180664444056,2.75882525320168,2.88099407688559,1.50704817835715,2.24520447199382,2.3060469651273,2.15513966487376,2.84573707812917,1.29340795759705,2.08016688184601,2.99116911078713,2.84954452155847,4.44875598760957,3.1342694986995,3.2925141825271,2.58744546864041,0,0,0,3.52113813310353,4.69052119962192,3.42117916775928,2.60419209143731,3.73852040320067,2.62254091908543,3.72054311600653,4.82892122519315,3.73649095574942,3.62031669809657,4.76085645829376,3.32382119138008,1.90059983652932,5.48875288227627,3.75777972529041,0.630869845692382,1.64647379806855,8.59088835757875,14.0158800331678,1.70630600428187,2.09013004674395,2.44848176511977,2.8235693447268,2.44615848229357,2.66315876557583,1.89811624617805,5.43506550589236,3.51869292320377,3.78017296878187,4.48417400373976,5.39291645192533,2.59365659849633,4.97853183135918,3.03468641524931,1.82797620175566,2.25415471346161,1.4255592949172,0.581857461502877,1.61312385747733,1.26473074248515,1.03327103585722,0.31399745568275,2.09775178667061,0,0.83422552858047,0.196558995113203,0.224862112384854,0.608580364165509,0.241177159752417,1.01850340712568,0.575392274901621,0.810676133875177,0,2.87536413054709,2.97712758134803,2.18426371180192,1.76805214562978,1.25578189465339,0.482443521363367,3.14080423283228,2.65287976478679,1.95557971730431,1.69745085775188,1.40814148973101,3.1826188913945,1.90434912708811,3.51240566144038,4.25614889086716,5.97954662051692,4.78364305972461,1.96635977658886,2.59027472798843,3.18227928879325,0,1.63171705145613,0.983528546038072,1.65562047782839,1.12385412991454,2.10981035865966,9.01642199571715,2.01976741763498,19.2460013843917,17.5697434933487,20.0343759891503,20.5513166239195,18.7150886229211,19.2492040936406,13.3587531552715,18.1198631905013,10.6727700045561,1.92792789853084,2.2710413633323,2.67098405500883,3.09485222771795,3.13443233647817,0,1.45668381692989,1.51161778482376,0.565815239267694,1.18120757152309,1.22974059177571,3.10113951801865,1.09060118843252,0.356497378384721,1.26414703174326,0,1.03135543248187,1.02131881726136,1.98067203434441,3.49268446213437,1.50035924522115,1.59606210278046,1.96205699362278,3.1264313914403,2.43571959291679,4.22409074514679,4.44847348814022,0.661585194164886,0.98931751764888,2.58343082713449,2.5934557719107,1.67121281604391,0.820704498725306,3.49777003955821,0.927126510052548,0.683483523191411,2.68302928352189,1.29636169158798,0.376736914009382,0.683471138605126,0.457556346413045,0.169978429993855,0.559805809294632,0.829199842826543,6.68269432610579,3.16335993581135,2.43983360552218,2.16010681643603,2.50905955217362,3.05707589244649,2.83215127408124,3.30613822901344,3.40282724579238,8.94343315713371,0,0,1.64468200648377,1.65458490457098,1.16670713006429,1.42075805825504,2.19642963138012,2.34714477291508,1.8228613878153,1.46803082195995,0.483168241652012,0.864090018773596,0.316011120628178,0.608175645870493,0.821687657318618,0.649604114888975,0.895133478337407,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331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| ||
|short_description=p2@Rhoc | |short_description=p2@Rhoc | ||
}} | }} |
Latest revision as of 05:51, 27 September 2015
Short description: | p2@Rhoc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rhoc_5end |
Coexpression cluster: | NA |
Association with transcript: | -169bp_to_ENSMUST00000002303_5end |
EntrezGene: | Rhoc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.35e-10 | 44 |
neurectodermal cell | 5.35e-10 | 44 |
neural cell | 1.67e-09 | 43 |
embryonic cell | 2.91e-09 | 70 |
migratory neural crest cell | 9.25e-08 | 10 |
neuron associated cell | 9.25e-08 | 10 |
glial cell (sensu Vertebrata) | 9.25e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 9.25e-08 | 10 |
glial cell | 9.25e-08 | 10 |
glioblast | 9.25e-08 | 10 |
glioblast (sensu Vertebrata) | 9.25e-08 | 10 |
autonomic neuron | 2.57e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.83e-08 | 11 |
autonomic nervous system | 2.57e-07 | 9 |
cardiovascular system | 8.39e-07 | 23 |
circulatory system | 8.39e-07 | 23 |