FFCP PHASE1:Mm9::chr15:89209380..89209393,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:89209380..89209393,-
|short_description=p7@Odf3b
|description=CAGE_peak_7_at_Odf3b_5end
|association_with_transcript=-24bp_to_uc007xgm.1_5end
|EntrezGene...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=70113 | |EntrezGene=70113 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q5M8M2 | |UniProt=Q5M8M2 | ||
|association_with_transcript=-24bp_to_uc007xgm.1_5end | |||
|cluster_id=chr15:89209380..89209393,- | |||
|description=CAGE_peak_7_at_Odf3b_5end | |||
|id=chr15:89209380..89209393,- | |||
|ontology_enrichment_celltype=CL:0000066!3.28e-10!25;CL:0002563!1.08e-09!9;CL:0002251!1.08e-09!9;CL:0000239!2.33e-09!6;CL:0000677!2.33e-09!6;CL:0000212!2.33e-09!6;CL:0000584!2.33e-09!6;CL:0000223!2.45e-08!20;CL:0000075!7.50e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.36e-10,25;CL:0000682,3.93e-09,3;CL:0000239,1.16e-08,6;CL:0000677,1.16e-08,6;CL:0000584,1.16e-08,6;CL:0000075,2.04e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.29e-16!15;UBERON:0001242!3.52e-14!13;UBERON:0000060!3.52e-14!13;UBERON:0001262!3.52e-14!13;UBERON:0004786!3.52e-14!13;UBERON:0000160!2.05e-12!43;UBERON:0003350!1.08e-09!9;UBERON:0004808!1.08e-09!9;UBERON:0001277!1.08e-09!9;UBERON:0005409!1.18e-09!59;UBERON:0001007!6.25e-09!128;UBERON:0001555!6.25e-09!128;UBERON:0007026!6.25e-09!128;UBERON:0004923!7.29e-09!24;UBERON:0004119!1.28e-08!130;UBERON:0000925!1.28e-08!130;UBERON:0006595!1.28e-08!130;UBERON:0009854!4.94e-08!23;UBERON:0009856!4.94e-08!23;UBERON:0004921!8.90e-08!126;UBERON:0004185!8.90e-08!126;UBERON:0000485!1.37e-07!11;UBERON:0002107!3.85e-07!22;UBERON:0007499!3.85e-07!22;UBERON:0006925!3.85e-07!22;UBERON:0009497!3.85e-07!22;UBERON:0000015!3.85e-07!22;UBERON:0002423!3.85e-07!22;UBERON:0006235!3.85e-07!22;UBERON:0008835!3.85e-07!22;UBERON:0003894!3.85e-07!22;UBERON:0004161!3.85e-07!22;UBERON:0008836!3.85e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.39e-18,31;UBERON:0000344,2.40e-14,15;UBERON:0001007,8.00e-13,116;UBERON:0001555,8.00e-13,116;UBERON:0007026,8.00e-13,116;UBERON:0004119,1.64e-12,118;UBERON:0000925,1.64e-12,118;UBERON:0006595,1.64e-12,118;UBERON:0009854,2.47e-12,23;UBERON:0009856,2.47e-12,23;UBERON:0005409,3.94e-11,47;UBERON:0004921,8.74e-11,114;UBERON:0002107,1.09e-10,22;UBERON:0007499,1.09e-10,22;UBERON:0006925,1.09e-10,22;UBERON:0009497,1.09e-10,22;UBERON:0000015,1.09e-10,22;UBERON:0002423,1.09e-10,22;UBERON:0006235,1.09e-10,22;UBERON:0008835,1.09e-10,22;UBERON:0003894,1.09e-10,22;UBERON:0004161,1.09e-10,22;UBERON:0008836,1.09e-10,22;UBERON:0001242,2.02e-10,13;UBERON:0001262,2.02e-10,13;UBERON:0004786,2.02e-10,13;UBERON:0002365,3.43e-09,25;UBERON:0002330,3.43e-09,25;UBERON:0004923,2.31e-08,24;UBERON:0003929,2.68e-07,55;UBERON:0001155,9.20e-07,2;UBERON:0000059,9.20e-07,2 | |||
|phase1_expression=0,6.2815573375085,6.82498859084304,16.6355316218757,24.543890767371,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,1.83527424853736,2.29692785646008,3.87685796543167,3.44753972297422,1.14014051673824,1.51218077855958,0.221730510655305,0,0,0,0.288851619751275,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0.679971333707751,3.2382191498269,3.89865850468601,6.2723764193627,0.561777680527007,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0.585561594023094,1.25668024088073,8.17462576667492,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,18.8338706300765,6.61126416658861,0,0,0,0,0,0,9.49058123089023,0.164698954724011,0.251335208800269,0,0.974820435595601,2.69645822596266,3.8904848977445,8.36393347668342,0.189667900953082,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,0,0,1.43768206527355,1.48856379067401,1.24815069245824,4.54641980304801,1.79397413521912,2.41221760681684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.648074866458964,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,6.2815573375085,6.82498859084304,16.6355316218757,24.543890767371,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3998863419011,1.83527424853736,2.29692785646008,3.87685796543167,3.44753972297422,1.14014051673824,1.51218077855958,0.221730510655305,0,0,0,0.288851619751275,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0.679971333707751,3.2382191498269,3.89865850468601,6.2723764193627,0.561777680527007,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0.585561594023094,1.25668024088073,8.17462576667492,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,18.8338706300765,6.61126416658861,0,0,0,0,0,0,9.49058123089023,0.164698954724011,0.251335208800269,0,0.974820435595601,2.69645822596266,3.8904848977445,8.36393347668342,0.189667900953082,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,0,0,1.43768206527355,1.48856379067401,1.24815069245824,4.54641980304801,1.79397413521912,2.41221760681684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.648074866458964,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | ||
|short_description=p7@Odf3b | |||
}} | }} |
Latest revision as of 07:28, 27 September 2015
Short description: | p7@Odf3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Odf3b_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -24bp_to_uc007xgm.1_5end |
EntrezGene: | Odf3b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.36e-10 | 25 |
M cell of gut | 3.93e-09 | 3 |
brush border epithelial cell | 1.16e-08 | 6 |
gut absorptive cell | 1.16e-08 | 6 |
enterocyte | 1.16e-08 | 6 |
columnar/cuboidal epithelial cell | 2.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.39e-18 | 31 |
mucosa | 2.40e-14 | 15 |
digestive system | 8.00e-13 | 116 |
digestive tract | 8.00e-13 | 116 |
primitive gut | 8.00e-13 | 116 |
endoderm-derived structure | 1.64e-12 | 118 |
endoderm | 1.64e-12 | 118 |
presumptive endoderm | 1.64e-12 | 118 |
digestive tract diverticulum | 2.47e-12 | 23 |
sac | 2.47e-12 | 23 |
gastrointestinal system | 3.94e-11 | 47 |
subdivision of digestive tract | 8.74e-11 | 114 |
liver | 1.09e-10 | 22 |
epithelial sac | 1.09e-10 | 22 |
digestive gland | 1.09e-10 | 22 |
epithelium of foregut-midgut junction | 1.09e-10 | 22 |
anatomical boundary | 1.09e-10 | 22 |
hepatobiliary system | 1.09e-10 | 22 |
foregut-midgut junction | 1.09e-10 | 22 |
hepatic diverticulum | 1.09e-10 | 22 |
liver primordium | 1.09e-10 | 22 |
septum transversum | 1.09e-10 | 22 |
liver bud | 1.09e-10 | 22 |
intestinal mucosa | 2.02e-10 | 13 |
wall of intestine | 2.02e-10 | 13 |
gastrointestinal system mucosa | 2.02e-10 | 13 |
exocrine gland | 3.43e-09 | 25 |
exocrine system | 3.43e-09 | 25 |
organ component layer | 2.31e-08 | 24 |
gut epithelium | 2.68e-07 | 55 |
colon | 9.20e-07 | 2 |
large intestine | 9.20e-07 | 2 |