FFCP PHASE1:Mm9::chr3:116671846..116671856,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=114301 | |EntrezGene=114301 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3UVT7,Q9JHU2 | |UniProt=Q3UVT7,Q9JHU2 | ||
|association_with_transcript=13bp_to_NM_023245,uc008rcx.1,uc008rcy.1_5end | |association_with_transcript=13bp_to_NM_023245,uc008rcx.1,uc008rcy.1_5end | ||
|cluster_id=chr3:116671846..116671856,- | |||
|description=CAGE_peak_11_at_Palmd_5end | |description=CAGE_peak_11_at_Palmd_5end | ||
|id=chr3:116671846..116671856,- | |id=chr3:116671846..116671856,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.44e-10!47;UBERON:0007100!6.63e-10!18;UBERON:0000948!6.63e-10!18;UBERON:0005498!6.63e-10!18;UBERON:0004140!6.63e-10!18;UBERON:0009881!6.63e-10!18;UBERON:0004141!6.63e-10!18;UBERON:0003084!6.63e-10!18;UBERON:0007005!6.63e-10!18;UBERON:0004139!6.63e-10!18;UBERON:0004291!6.63e-10!18;UBERON:0004111!7.94e-10!122;UBERON:0000025!2.01e-09!114;UBERON:0004535!5.00e-09!23;UBERON:0001009!5.00e-09!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.49e-16,47;UBERON:0004535,3.00e-15,23;UBERON:0001009,3.00e-15,23;UBERON:0007100,1.32e-13,18;UBERON:0000948,1.32e-13,18;UBERON:0005498,1.32e-13,18;UBERON:0004140,1.32e-13,18;UBERON:0009881,1.32e-13,18;UBERON:0004141,1.32e-13,18;UBERON:0003084,1.32e-13,18;UBERON:0007005,1.32e-13,18;UBERON:0004139,1.32e-13,18;UBERON:0004291,1.32e-13,18;UBERON:0004872,1.25e-10,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,0,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0,0.182975287204819,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0,0.579728977403356,0,0.679971333707751,1.07940638327563,0,0.448026887097336,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0,0,0,0.301445281105245,0,0.502666365318702,0,1.73519228303894,0,0.485300549842228,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0.521472960576829,0.511430914660661,0,0,0.101839363850316,0,0.505445516867349,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0,0,0.0937017245597288,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,1.03562886267751,0.703578179943289,0.540186184383045,0.946978942340841,0.590292695242212,0.154267112887378,0.697601834251224,0.268273401399619,1.16765342367169,0.987359099480883,0.656669856316381,1.21603214318784,1.31579988682799,0.219550115291051,1.47627060636409,0,0.205809224758569,0,0,0,0,0.257734922644187,0,0,0,0.474529061544512,0,0,0,0,0.898819408654221,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.810676133875177,1.37280706594041,1.43768206527355,0.372140947668503,0.624075346229121,0.757736633841335,0.179397413521912,0.964887042726734,0.369506380333209,0.189491411770485,0,0,0,0.335012514883631,0,0.195133647857799,0.630540576424764,0.8858587585951,0.318909537314974,0.491589944147214,0.863424909329478,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0,0.329098041204242,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0,0.134864346384821,0.495920734352016,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0,0,0,0.0962118416403295,0,0.680191150845634,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0.564751842617067,0,0,0.68741272937475,0,0.755393897389701,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.887379030796687,0,0.290692833264657,0.188218760830661,0.25384382367503,0.365855945745545,0.526139422875686,0.407412341537585,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0,0.701794825336225,0.214871054048298,0,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,0,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0,0.182975287204819,0,0,0,0.30559649555362,0,0.142371680799103,0,0,0,0.579728977403356,0,0.679971333707751,1.07940638327563,0,0.448026887097336,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0,0,0,0.301445281105245,0,0.502666365318702,0,1.73519228303894,0,0.485300549842228,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0.521472960576829,0.511430914660661,0,0,0.101839363850316,0,0.505445516867349,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0,0,0.0937017245597288,0,0.215567992932842,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,1.03562886267751,0.703578179943289,0.540186184383045,0.946978942340841,0.590292695242212,0.154267112887378,0.697601834251224,0.268273401399619,1.16765342367169,0.987359099480883,0.656669856316381,1.21603214318784,1.31579988682799,0.219550115291051,1.47627060636409,0,0.205809224758569,0,0,0,0,0.257734922644187,0,0,0,0.474529061544512,0,0,0,0,0.898819408654221,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.810676133875177,1.37280706594041,1.43768206527355,0.372140947668503,0.624075346229121,0.757736633841335,0.179397413521912,0.964887042726734,0.369506380333209,0.189491411770485,0,0,0,0.335012514883631,0,0.195133647857799,0.630540576424764,0.8858587585951,0.318909537314974,0.491589944147214,0.863424909329478,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0,0.329098041204242,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0,0.134864346384821,0.495920734352016,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0,0,0,0.0962118416403295,0,0.680191150845634,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0.564751842617067,0,0,0.68741272937475,0,0.755393897389701,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0,0.551530525350042,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.887379030796687,0,0.290692833264657,0.188218760830661,0.25384382367503,0.365855945745545,0.526139422875686,0.407412341537585,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0,0.701794825336225,0.214871054048298,0,0,0.463735671240843 | ||
|short_description=p11@Palmd | |short_description=p11@Palmd | ||
}} | }} |
Latest revision as of 12:29, 1 October 2015
Short description: | p11@Palmd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Palmd_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_NM_023245, uc008rcx.1, uc008rcy.1_5end |
EntrezGene: | Palmd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.49e-16 | 47 |
cardiovascular system | 3.00e-15 | 23 |
circulatory system | 3.00e-15 | 23 |
primary circulatory organ | 1.32e-13 | 18 |
heart | 1.32e-13 | 18 |
primitive heart tube | 1.32e-13 | 18 |
primary heart field | 1.32e-13 | 18 |
anterior lateral plate mesoderm | 1.32e-13 | 18 |
heart tube | 1.32e-13 | 18 |
heart primordium | 1.32e-13 | 18 |
cardiac mesoderm | 1.32e-13 | 18 |
cardiogenic plate | 1.32e-13 | 18 |
heart rudiment | 1.32e-13 | 18 |
splanchnic layer of lateral plate mesoderm | 1.25e-10 | 33 |