FFCP PHASE1:Mm9::chr16:11254459..11254468,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14852 | |EntrezGene=14852 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8K2E1,G3UWC0,Q8CCV1,E9QK49,Q3UZ36 | |UniProt=Q8K2E1,G3UWC0,Q8CCV1,E9QK49,Q3UZ36 | ||
|association_with_transcript=-41bp_to_ENSMUST00000163429,NM_001130008,NM_146066,uc007yfe.2,uc007yff.2,uc007yfg.1_5end | |association_with_transcript=-41bp_to_ENSMUST00000163429,NM_001130008,NM_146066,uc007yfe.2,uc007yff.2,uc007yfg.1_5end | ||
|cluster_id=chr16:11254459..11254468,- | |||
|description=CAGE_peak_7_at_Gspt1_5end | |description=CAGE_peak_7_at_Gspt1_5end | ||
|id=chr16:11254459..11254468,- | |id=chr16:11254459..11254468,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,1.87e-17,2;CL:0000328,1.87e-17,2;CL:0002573,1.87e-17,2;CL:0002376,1.87e-17,2;CL:0000218,1.87e-17,2;CL:0000692,1.87e-17,2;CL:0002377,1.87e-17,2;CL:0002375,1.87e-17,2;CL:0000215,5.78e-12,3;CL:0000349,7.41e-12,3;CL:0000351,7.41e-12,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,7.41e-12,3;UBERON:0000307,7.41e-12,3;UBERON:0007010,7.41e-12,3;UBERON:0000010,3.21e-07,11 | |||
|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0.33575854382378,0.467225281191051,0.258246646883153,0.422366166455,0.468129052643987,0.34243593645101,0.478632953972018,0,0.174840804837995,0,0.404950534779652,0,0,0.274228867211478,0,0.0850432901510698,0.297872853602656,0.522399578277871,0.319984845586813,0,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.550640256485045,0,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0,0.336093799142464,0.257259436035947,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,0.207379224616955,0,0.420649922702764,0.285650984403804,0.441737081903227,0,0.287536413054709,0,0,0.127687338085188,0,0,0.274462930807229,0,0,0,0.45839474333043,0.589257170947335,0,0.186399445825301,1.81742863999642,1.43585964202892,0,0,0.679971333707751,0,0,0,0,0.340860645156116,0.519572009205738,0.35333957451034,0.281686839553361,0,0,0,0,0.253359865475099,0,0.45673551887624,0,0,0.520455980298408,0.608930956624282,0.691846491768175,0.301445281105245,0.117588707135705,0.251333182659351,0.247194967734374,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,0,0.766371165625774,0.11981512450592,0,0.254140454146129,0.299581278809645,0.457500602818626,0.753926112677186,0.347648640384553,0.767146371990992,0.83115217823824,0.324482526135515,0.203678727700633,0.248813941220186,0.252722758433675,0.210441855886474,0.390361328888111,0,0,0,0.204109497453984,0.12811372028485,0.281105173679186,0.517406741478031,0,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0.568326998791185,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0,0.465067889500816,0.536546802799238,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0.308713837137853,1.32167513193519,0,0.426576501070468,0.464473343720877,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0,0.754005626400808,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0.758671603812327,0.228497025219458,1.1270773567308,0.407302655690628,0,0.210407459670956,0.189709611372772,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0.333690211432188,0.786235980452812,0.224862112384854,0.608580364165509,0.482354319504834,0.50925170356284,0,0.162135226775035,0,2.87536413054709,0,0.312037673114561,0,0.179397413521912,0,0,0.568474235311454,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0.44292937929755,0.478364305972461,0,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0.160550589987792,0.234423373184406,0.163934945376675,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0.445597348164788,0.566153061577665,0.809621403349789,0.876767573733936,1.18586333383957,0,0.283880170416537,0.35613120733451,0.488660878060728,0.494910368917606,1.32745138339963,0,0.302323556964751,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0.258717367565509,0,0.886701168211368,0.356737635204141,0.164549020602121,0,0.704015124191131,0.847328283455281,0.220528398054962,0,0.322928853391811,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,0.18542530201051,0.341741761595705,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0.849892149969277,0.279902904647316,0.967399816630967,0,0.158167996790568,0,0.324016022465404,0,0,0,0.247960367176008,0,0,0,0.56369293868419,0.299033092087958,0.496375471371293,0.777804753376191,0.258319646955462,0.506868376472335,0.352071715937262,0.2604087696879,0.209718688851422,1.20792060413003,1.15212002503146,0,0.202725215290164,0.513554785824136,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.302478555410522,0.194915761479505,0.0962118416403295,0,0.226730383615211,0.665957860122194,1.43542170575161,1.51096154727671,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,0.501572104035363,0.564751842617067,0.460325236507177,0,0.68741272937475,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.31136204275253,0,0,0,0.628839487883947,0.183843508450014,0,0.206035057238894,0,0,0,0,0.37456602987953,0.0640251524048693,0.287177344778066,0,0.347652977834566,0.192909220463705,0.824171801606613,0.147198920134397,0,0.177475806159338,0.238436189947321,0.436039249896986,0.376437521661322,0.0846146078916765,0,0,0.543216455383447,0.561142271657738,0.355905054372522,0.492522411877817,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0.33575854382378,0.467225281191051,0.258246646883153,0.422366166455,0.468129052643987,0.34243593645101,0.478632953972018,0,0.174840804837995,0,0.404950534779652,0,0,0.274228867211478,0,0.0850432901510698,0.297872853602656,0.522399578277871,0.319984845586813,0,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.550640256485045,0,0,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0,0.336093799142464,0.257259436035947,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,0.207379224616955,0,0.420649922702764,0.285650984403804,0.441737081903227,0,0.287536413054709,0,0,0.127687338085188,0,0,0.274462930807229,0,0,0,0.45839474333043,0.589257170947335,0,0.186399445825301,1.81742863999642,1.43585964202892,0,0,0.679971333707751,0,0,0,0,0.340860645156116,0.519572009205738,0.35333957451034,0.281686839553361,0,0,0,0,0.253359865475099,0,0.45673551887624,0,0,0.520455980298408,0.608930956624282,0.691846491768175,0.301445281105245,0.117588707135705,0.251333182659351,0.247194967734374,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,0,0.766371165625774,0.11981512450592,0,0.254140454146129,0.299581278809645,0.457500602818626,0.753926112677186,0.347648640384553,0.767146371990992,0.83115217823824,0.324482526135515,0.203678727700633,0.248813941220186,0.252722758433675,0.210441855886474,0.390361328888111,0,0,0,0.204109497453984,0.12811372028485,0.281105173679186,0.517406741478031,0,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0.568326998791185,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0,0.465067889500816,0.536546802799238,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0.308713837137853,1.32167513193519,0,0.426576501070468,0.464473343720877,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0,0.754005626400808,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0.758671603812327,0.228497025219458,1.1270773567308,0.407302655690628,0,0.210407459670956,0.189709611372772,0.295220295959204,0.156998727841375,0.246794327843601,0.296452627087149,0.333690211432188,0.786235980452812,0.224862112384854,0.608580364165509,0.482354319504834,0.50925170356284,0,0.162135226775035,0,2.87536413054709,0,0.312037673114561,0,0.179397413521912,0,0,0.568474235311454,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,0,0.195133647857799,0.157635144106191,0.44292937929755,0.478364305972461,0,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0.160550589987792,0.234423373184406,0.163934945376675,0.504941854408746,0.315508219416257,0,0.215423397732799,0,0.445597348164788,0.566153061577665,0.809621403349789,0.876767573733936,1.18586333383957,0,0.283880170416537,0.35613120733451,0.488660878060728,0.494910368917606,1.32745138339963,0,0.302323556964751,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0.36012218806262,0.258717367565509,0,0.886701168211368,0.356737635204141,0.164549020602121,0,0.704015124191131,0.847328283455281,0.220528398054962,0,0.322928853391811,0.120625849856312,0.238744688006273,0.164140899745061,0.291480836629851,0.18542530201051,0.341741761595705,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0.849892149969277,0.279902904647316,0.967399816630967,0,0.158167996790568,0,0.324016022465404,0,0,0,0.247960367176008,0,0,0,0.56369293868419,0.299033092087958,0.496375471371293,0.777804753376191,0.258319646955462,0.506868376472335,0.352071715937262,0.2604087696879,0.209718688851422,1.20792060413003,1.15212002503146,0,0.202725215290164,0.513554785824136,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.302478555410522,0.194915761479505,0.0962118416403295,0,0.226730383615211,0.665957860122194,1.43542170575161,1.51096154727671,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,0.501572104035363,0.564751842617067,0.460325236507177,0,0.68741272937475,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.31136204275253,0,0,0,0.628839487883947,0.183843508450014,0,0.206035057238894,0,0,0,0,0.37456602987953,0.0640251524048693,0.287177344778066,0,0.347652977834566,0.192909220463705,0.824171801606613,0.147198920134397,0,0.177475806159338,0.238436189947321,0.436039249896986,0.376437521661322,0.0846146078916765,0,0,0.543216455383447,0.561142271657738,0.355905054372522,0.492522411877817,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0.220591419119515,0 | ||
|short_description=p7@Gspt1 | |short_description=p7@Gspt1 | ||
}} | }} |
Latest revision as of 15:09, 1 October 2015
Short description: | p7@Gspt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gspt1_5end |
Coexpression cluster: | NA |
Association with transcript: | -41bp_to_ENSMUST00000163429, NM_001130008, NM_146066, uc007yfe.2, uc007yff.2, uc007yfg.1_5end |
EntrezGene: | Gspt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 1.87e-17 | 2 |
myelin accumulating cell | 1.87e-17 | 2 |
Schwann cell | 1.87e-17 | 2 |
non-myelinating Schwann cell | 1.87e-17 | 2 |
myelinating Schwann cell;;Schwann cell | 1.87e-17 | 2 |
terminal Schwann cell | 1.87e-17 | 2 |
immature Schwann cell | 1.87e-17 | 2 |
Schwann cell precursor | 1.87e-17 | 2 |
barrier cell | 5.78e-12 | 3 |
extraembryonic cell | 7.41e-12 | 3 |
trophoblast cell | 7.41e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 7.41e-12 | 3 |
blastula | 7.41e-12 | 3 |
cleaving embryo | 7.41e-12 | 3 |
peripheral nervous system | 3.21e-07 | 11 |