FFCP PHASE1:Mm9::chr3:142283703..142283714,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14469 | |EntrezGene=14469 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0E6 | |UniProt=Q9Z0E6 | ||
|association_with_transcript=76bp_to_NM_010260,uc008roy.1_5end | |association_with_transcript=76bp_to_NM_010260,uc008roy.1_5end | ||
|cluster_id=chr3:142283703..142283714,+ | |||
|description=CAGE_peak_4_at_Gbp2_5end | |description=CAGE_peak_4_at_Gbp2_5end | ||
|id=chr3:142283703..142283714,+ | |id=chr3:142283703..142283714,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.41e-09,7;CL:0000049,4.18e-09,19;CL:0000988,6.81e-07,32;CL:0002032,6.81e-07,32;CL:0000037,6.81e-07,32;CL:0000837,6.81e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.76e-10!70;UBERON:0005057!1.79e-08!51;UBERON:0000077!1.95e-07!97;UBERON:0000926!2.22e-07!193;UBERON:0004120!2.22e-07!193;UBERON:0006603!2.22e-07!193 | |ontology_enrichment_uberon=UBERON:0002405!1.76e-10!70;UBERON:0005057!1.79e-08!51;UBERON:0000077!1.95e-07!97;UBERON:0000926!2.22e-07!193;UBERON:0004120!2.22e-07!193;UBERON:0006603!2.22e-07!193 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.64e-08,5;UBERON:0007500,2.64e-08,5;UBERON:0001981,2.64e-08,5;UBERON:0002049,2.64e-08,5;UBERON:0007798,2.64e-08,5;UBERON:0004537,2.64e-08,5;UBERON:0006965,2.64e-08,5 | |||
|phase1_expression=0,0,0.454999239389536,0.30246421130683,0,0,0,0.645616617207881,1.12630977721333,1.17032263160997,0,0.319088635981346,0.171200729931206,0.524522414513984,0,0.809901069559304,0,0.946386496074713,0.959801035240171,1.27316895539409,0.510259740906419,0,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,1.17646297606203,0.683045484958446,0.485510353031154,4.53228544712078,3.95370031756107,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0,0,0.671130424230945,0.725362142011344,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,4.05810284182349,2.58127163094416,0,0,0,0,0.842666520790511,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0.34255163915718,2.58937883647172,1.03909497345377,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,2.02439099687876,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,1.53274233125155,1.7972268675888,2.39961092397363,3.30382590389968,0.299581278809645,0,0,0.173824320192276,0,0.41557608911912,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,2.80885274925294,4.11756651383544,5.39910648851626,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.486412857275134,0,1.3173006917463,0.805238512562231,0,0.102904612379284,0.330418782983798,0,0,0,0,0.201683524623343,0.22237804384487,0,0.949058123089023,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.648414149624083,1.39398891278057,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.442830443938806,0.31399745568275,0,0.296452627087149,0,0,0.674586337154561,0.405720242777006,0.72353147925725,0.25462585178142,1.15078454980324,0.486405680325106,0.823684239564244,4.31304619582064,5.20997326735905,0.936113019343682,1.26289438973556,0.538192240565737,1.4473305640901,2.40179147216586,0,0,0,0,0,0.238043640886014,0.390267295715598,0.315270288212382,1.10732344824387,0.478364305972461,0.81931657357869,1.20879487306127,0.723245292907558,15.0791283939272,135.976420954677,0.491764273019036,0.275936746304732,0,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0,0,0.494910368917606,0,0,0.302323556964751,0,0,0.614870295887855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,1.64270195644597,0.63549621259146,0,0.16488625294148,0.161464426695906,0,0,0,0.874442509889552,0.370850604021019,2.05045056957423,0.206386867963223,0.185194527369712,0.941842285023455,1.23024804948923,1.83022538565218,1.01987057996313,2.23922323717853,1.10559979043539,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.661227645802687,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0.2604087696879,0.104859344425711,0,0.288030006257865,0.632022241256357,0.405450430580328,0.205421914329655,0.129920822977795,0,0.198681354781265,0.240390899039938,0.295379054349154,0.504832249740738,0.457240839929999,0,0.292373642219257,0.288635524920988,0.233753804363138,0,0,0,0,2.31827512838629,2.25218970541418,3.11357761254351,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0.463735671240843 | |phase1_expression=0,0,0.454999239389536,0.30246421130683,0,0,0,0.645616617207881,1.12630977721333,1.17032263160997,0,0.319088635981346,0.171200729931206,0.524522414513984,0,0.809901069559304,0,0.946386496074713,0.959801035240171,1.27316895539409,0.510259740906419,0,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,1.17646297606203,0.683045484958446,0.485510353031154,4.53228544712078,3.95370031756107,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0,0,0.671130424230945,0.725362142011344,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,4.05810284182349,2.58127163094416,0,0,0,0,0.842666520790511,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0.34255163915718,2.58937883647172,1.03909497345377,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,2.02439099687876,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,1.53274233125155,1.7972268675888,2.39961092397363,3.30382590389968,0.299581278809645,0,0,0.173824320192276,0,0.41557608911912,0.162241263067758,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,2.80885274925294,4.11756651383544,5.39910648851626,0,0.234526059981096,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.486412857275134,0,1.3173006917463,0.805238512562231,0,0.102904612379284,0.330418782983798,0,0,0,0,0.201683524623343,0.22237804384487,0,0.949058123089023,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.648414149624083,1.39398891278057,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.442830443938806,0.31399745568275,0,0.296452627087149,0,0,0.674586337154561,0.405720242777006,0.72353147925725,0.25462585178142,1.15078454980324,0.486405680325106,0.823684239564244,4.31304619582064,5.20997326735905,0.936113019343682,1.26289438973556,0.538192240565737,1.4473305640901,2.40179147216586,0,0,0,0,0,0.238043640886014,0.390267295715598,0.315270288212382,1.10732344824387,0.478364305972461,0.81931657357869,1.20879487306127,0.723245292907558,15.0791283939272,135.976420954677,0.491764273019036,0.275936746304732,0,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0,0,0.494910368917606,0,0,0.302323556964751,0,0,0.614870295887855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,1.64270195644597,0.63549621259146,0,0.16488625294148,0.161464426695906,0,0,0,0.874442509889552,0.370850604021019,2.05045056957423,0.206386867963223,0.185194527369712,0.941842285023455,1.23024804948923,1.83022538565218,1.01987057996313,2.23922323717853,1.10559979043539,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.661227645802687,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0.168956125490778,0.234714477291508,0.2604087696879,0.104859344425711,0,0.288030006257865,0.632022241256357,0.405450430580328,0.205421914329655,0.129920822977795,0,0.198681354781265,0.240390899039938,0.295379054349154,0.504832249740738,0.457240839929999,0,0.292373642219257,0.288635524920988,0.233753804363138,0,0,0,0,2.31827512838629,2.25218970541418,3.11357761254351,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0.463735671240843 | ||
|short_description=p4@Gbp2 | |short_description=p4@Gbp2 | ||
}} | }} |
Latest revision as of 17:54, 1 October 2015
Short description: | p4@Gbp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gbp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | 76bp_to_NM_010260, uc008roy.1_5end |
EntrezGene: | Gbp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.41e-09 | 7 |
common myeloid progenitor | 4.18e-09 | 19 |
hematopoietic cell | 6.81e-07 | 32 |
hematopoietic oligopotent progenitor cell | 6.81e-07 | 32 |
hematopoietic stem cell | 6.81e-07 | 32 |
hematopoietic multipotent progenitor cell | 6.81e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.64e-08 | 5 |
epithelial tube open at both ends | 2.64e-08 | 5 |
blood vessel | 2.64e-08 | 5 |
vasculature | 2.64e-08 | 5 |
vascular system | 2.64e-08 | 5 |
blood vasculature | 2.64e-08 | 5 |
vascular cord | 2.64e-08 | 5 |