FFCP PHASE1:Mm9::chr3:30993883..30993898,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20482 | |EntrezGene=20482 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q60665 | |UniProt=Q60665 | ||
|association_with_transcript=-81bp_to_ENSMUST00000118470_5end | |association_with_transcript=-81bp_to_ENSMUST00000118470_5end | ||
|cluster_id=chr3:30993883..30993898,+ | |||
|description=CAGE_peak_2_at_Skil_5end | |description=CAGE_peak_2_at_Skil_5end | ||
|id=chr3:30993883..30993898,+ | |id=chr3:30993883..30993898,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.41e-07!49;UBERON:0000991!8.24e-07!18;UBERON:0005564!8.24e-07!18;UBERON:0003135!9.77e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.29e-07,49;UBERON:0000991,3.73e-07,18;UBERON:0005564,3.73e-07,18;UBERON:0003135,4.25e-07,15 | |||
|phase1_expression=1.60148847104794,0.697950815278722,1.36499771816861,0.90739263392049,0,0.839396359559449,0.700837921786577,2.32421982194837,0.563154888606667,0.468129052643987,1.36974374580404,0.319088635981346,2.39681021903688,2.53519167015092,0,0.404950534779652,0,1.57731082679119,3.70208970735495,1.69755860719212,2.21112554392781,0.198581902401771,0.261199789138935,0.47997726838022,0.91763712426868,0.57423196411502,0.430761996159075,0.430942465371778,0.570070258369122,0.504060259519861,0.221730510655305,2.54012269383853,2.46025915033828,0,1.44425809875637,0.498703936075477,0.612508068787107,1.67412652294763,3.906676722619,2.61761871986899,0,2.04913645487534,0.971020706062307,0.881277725829041,1.4192770370732,0.734187008646726,0,0.65407546914134,0.439372365468944,0.777719596297134,0.279972843250725,0,1.17447824240415,2.90144856804538,2.01656279485478,0.771778308107841,1.43266719969378,0.515672092277442,2.63011399117477,1.5869729378161,1.26766280701236,0.677689064138264,0.889294796111139,0,0,0,0,0,3.42175720617976,1.4850653216486,1.89292465216244,1.14260393761521,1.10434270475807,2.32732518508413,1.53352753629178,0.919218786610021,1.10115880999389,1.91531007127782,0.768032666281217,2.37395317914349,2.65314166446988,3.12548022334056,0.558365998002762,1.12552522006336,0.916789486660861,1.47314292736834,1.42371680799103,2.60959224155421,1.4387976733305,1.13357340160178,1.44932244350839,0,0.679971333707751,0,0.649776417447669,1.34408066129201,0.702222100658759,0.170430322578058,0.779358013808606,0,1.54927761754349,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0.505524445014783,1.25602267690966,1.29468941823586,1.33597925158342,1.21439728736295,1.21786191324856,1.61430848079241,1.95939432718409,3.41007250693544,1.38233250462643,4.44950941921873,1.87979163995885,1.76922110389975,2.75003644910596,1.10420759230197,0.969750506270444,1.86391761218122,1.46390398505774,1.25668024088073,0.766371165625774,0.958520996047362,0.599902730993408,1.14363204365758,1.9472783122627,7.77751024791665,4.52355667606312,5.56237824615285,4.60287823194595,1.66230435647648,3.56930778749067,4.88828946481518,1.99051152976149,3.53811861807145,1.68353484709179,2.73252930221678,1.37941262660084,3.78130472591233,5.27466862425003,6.46346741937615,5.38077625196369,4.59138450342671,1.81092359517311,1.72454394346274,1.89106080167819,0.703804496655795,0.876782929710299,1.94633074457919,4.52727816478817,2.26360350048738,3.58261680273288,0.702213187313235,0.772043721344145,0.568326998791185,2.27838349789052,1.87620847984877,3.06105504483725,2.13070262026689,2.16440654922144,2.1597395804233,2.32533944750408,1.07309360559848,3.61972561338225,2.96207729844265,2.13417703302824,3.40489000092594,1.90059983652932,2.19550115291051,2.14730270016595,4.20579897128254,2.77842453424068,0.991256348951394,0.264450566663544,2.98603550749328,0.928946687441754,1.15980715189884,1.21010114774006,0.889512175379481,0.570676878337677,0.474529061544512,1.31759163779209,2.26201687920243,1.1937388322469,1.9496408711912,2.69645822596266,1.29682829924817,0.597423819763102,1.32767530667157,1.48523066392647,1.1270773567308,1.83286195060783,1.35766741017338,2.31448205638051,3.16182685621286,1.91893192373483,1.41298855057237,1.35736880313981,0,1.50160595144485,1.37591296579242,2.47348323623339,2.02860121388503,1.68824011826692,0.25462585178142,0.575392274901621,3.08056930872567,0.549122826376163,4.31304619582064,2.60498663367952,2.80833905803104,1.51547326768267,1.07638448113147,2.8946611281802,1.66277871149944,1.13694847062291,2.11854469374634,2.20668611507745,1.64283173801951,1.34005005953453,2.85652369063216,2.73187107000918,3.31033802623001,3.76489972402917,2.07291199254733,2.62181303545181,1.38147985492716,3.03763023021174,0,0.54390568381871,0.491764273019036,1.93155722413313,0.963303539926752,0.937693492737625,2.13115428989678,2.52470927204373,1.89304931649754,1.95219372148319,1.07711698866399,0.955875191810208,1.55959071857676,2.54768877709949,0.809621403349789,1.75353514746787,1.58115111178609,3.85585579706168,1.41940085208269,2.13678724400706,3.4206261464251,1.48473110675282,2.65490276679926,0.728341908464944,0.604647113929502,2.64047111658257,0.590603785761546,0.922305443831782,0.775284879504663,2.90826983582004,4.63446591900138,1.26414703174326,2.10837217149998,2.06271086496374,1.70219802876894,2.34079422240703,0.646793418913773,2.14337035031592,3.72414490648775,2.85390108163313,2.46823530903181,2.74018454203139,0.938686832254841,3.1774810629573,0.441056796109924,2.4732937941222,4.19807509409354,3.01564624640779,2.50681922406587,3.28281799490123,1.1659233465194,1.66882771809459,1.36696704638282,1.44470807574256,0.555583582109135,0.941842285023455,1.0935538217682,0.228778173206523,1.5298058699447,1.25956307091292,0.967399816630967,0,2.53068794864908,1.82987520414164,1.62008011232702,1.88179466413022,0.655087691238533,2.56242258131159,3.05817786183743,1.30877970992015,1.03691978633434,2.4853572523477,6.20062232552609,4.18646328923141,3.14371131868485,3.50012139019286,2.45403664607689,4.39285926276023,6.21993364822496,5.07797100891405,3.67007705489988,4.59009829569411,3.45636007509439,1.26404448251271,1.01362607645082,0.616265742988964,0.649604114888975,1.07416017400489,1.78813219303138,2.40390899039938,1.47689527174577,1.11063094942962,1.5241361331,1.10908803650525,1.55932609183604,0.962118416403295,1.28564592399726,1.13365191807606,3.55177525398503,2.15313255862742,0.503653849092235,0.965947970160952,1.87682475451182,0.73260649706906,1.71494703263253,0,3.3885110557024,2.76195141904306,1.71868654031819,4.81188910562325,4.7955776383945,2.2661816921691,1.35004500046361,2.2516060161211,3.62513927187364,2.5888015587591,2.28332164685189,1.99512436700516,1.53660245178721,0.729320151204882,1.25767897576789,0.919217542250071,1.55572709461131,1.64828045791115,1.60459604795908,1.26348605881899,1.2673964994512,2.82939512079114,2.34103768674706,2.30490548657529,1.95280594449085,2.85776214769844,1.27472758539341,2.50781986602817,1.64834360321323,1.76638704161277,1.71434626192708,1.77475806159337,2.86123427936785,1.16277133305863,1.50575008664529,1.86152137361688,2.74391959309159,1.8414879800649,1.7654534799962,0.561142271657738,2.49133538060766,2.46261205938909,0.818462086339379,2.63392630016142,2.70069255373598,1.99848462350357,2.33931608445408,2.79332370262788,1.53030665655075,2.20591419119516,3.01428186306548 | |phase1_expression=1.60148847104794,0.697950815278722,1.36499771816861,0.90739263392049,0,0.839396359559449,0.700837921786577,2.32421982194837,0.563154888606667,0.468129052643987,1.36974374580404,0.319088635981346,2.39681021903688,2.53519167015092,0,0.404950534779652,0,1.57731082679119,3.70208970735495,1.69755860719212,2.21112554392781,0.198581902401771,0.261199789138935,0.47997726838022,0.91763712426868,0.57423196411502,0.430761996159075,0.430942465371778,0.570070258369122,0.504060259519861,0.221730510655305,2.54012269383853,2.46025915033828,0,1.44425809875637,0.498703936075477,0.612508068787107,1.67412652294763,3.906676722619,2.61761871986899,0,2.04913645487534,0.971020706062307,0.881277725829041,1.4192770370732,0.734187008646726,0,0.65407546914134,0.439372365468944,0.777719596297134,0.279972843250725,0,1.17447824240415,2.90144856804538,2.01656279485478,0.771778308107841,1.43266719969378,0.515672092277442,2.63011399117477,1.5869729378161,1.26766280701236,0.677689064138264,0.889294796111139,0,0,0,0,0,3.42175720617976,1.4850653216486,1.89292465216244,1.14260393761521,1.10434270475807,2.32732518508413,1.53352753629178,0.919218786610021,1.10115880999389,1.91531007127782,0.768032666281217,2.37395317914349,2.65314166446988,3.12548022334056,0.558365998002762,1.12552522006336,0.916789486660861,1.47314292736834,1.42371680799103,2.60959224155421,1.4387976733305,1.13357340160178,1.44932244350839,0,0.679971333707751,0,0.649776417447669,1.34408066129201,0.702222100658759,0.170430322578058,0.779358013808606,0,1.54927761754349,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0.505524445014783,1.25602267690966,1.29468941823586,1.33597925158342,1.21439728736295,1.21786191324856,1.61430848079241,1.95939432718409,3.41007250693544,1.38233250462643,4.44950941921873,1.87979163995885,1.76922110389975,2.75003644910596,1.10420759230197,0.969750506270444,1.86391761218122,1.46390398505774,1.25668024088073,0.766371165625774,0.958520996047362,0.599902730993408,1.14363204365758,1.9472783122627,7.77751024791665,4.52355667606312,5.56237824615285,4.60287823194595,1.66230435647648,3.56930778749067,4.88828946481518,1.99051152976149,3.53811861807145,1.68353484709179,2.73252930221678,1.37941262660084,3.78130472591233,5.27466862425003,6.46346741937615,5.38077625196369,4.59138450342671,1.81092359517311,1.72454394346274,1.89106080167819,0.703804496655795,0.876782929710299,1.94633074457919,4.52727816478817,2.26360350048738,3.58261680273288,0.702213187313235,0.772043721344145,0.568326998791185,2.27838349789052,1.87620847984877,3.06105504483725,2.13070262026689,2.16440654922144,2.1597395804233,2.32533944750408,1.07309360559848,3.61972561338225,2.96207729844265,2.13417703302824,3.40489000092594,1.90059983652932,2.19550115291051,2.14730270016595,4.20579897128254,2.77842453424068,0.991256348951394,0.264450566663544,2.98603550749328,0.928946687441754,1.15980715189884,1.21010114774006,0.889512175379481,0.570676878337677,0.474529061544512,1.31759163779209,2.26201687920243,1.1937388322469,1.9496408711912,2.69645822596266,1.29682829924817,0.597423819763102,1.32767530667157,1.48523066392647,1.1270773567308,1.83286195060783,1.35766741017338,2.31448205638051,3.16182685621286,1.91893192373483,1.41298855057237,1.35736880313981,0,1.50160595144485,1.37591296579242,2.47348323623339,2.02860121388503,1.68824011826692,0.25462585178142,0.575392274901621,3.08056930872567,0.549122826376163,4.31304619582064,2.60498663367952,2.80833905803104,1.51547326768267,1.07638448113147,2.8946611281802,1.66277871149944,1.13694847062291,2.11854469374634,2.20668611507745,1.64283173801951,1.34005005953453,2.85652369063216,2.73187107000918,3.31033802623001,3.76489972402917,2.07291199254733,2.62181303545181,1.38147985492716,3.03763023021174,0,0.54390568381871,0.491764273019036,1.93155722413313,0.963303539926752,0.937693492737625,2.13115428989678,2.52470927204373,1.89304931649754,1.95219372148319,1.07711698866399,0.955875191810208,1.55959071857676,2.54768877709949,0.809621403349789,1.75353514746787,1.58115111178609,3.85585579706168,1.41940085208269,2.13678724400706,3.4206261464251,1.48473110675282,2.65490276679926,0.728341908464944,0.604647113929502,2.64047111658257,0.590603785761546,0.922305443831782,0.775284879504663,2.90826983582004,4.63446591900138,1.26414703174326,2.10837217149998,2.06271086496374,1.70219802876894,2.34079422240703,0.646793418913773,2.14337035031592,3.72414490648775,2.85390108163313,2.46823530903181,2.74018454203139,0.938686832254841,3.1774810629573,0.441056796109924,2.4732937941222,4.19807509409354,3.01564624640779,2.50681922406587,3.28281799490123,1.1659233465194,1.66882771809459,1.36696704638282,1.44470807574256,0.555583582109135,0.941842285023455,1.0935538217682,0.228778173206523,1.5298058699447,1.25956307091292,0.967399816630967,0,2.53068794864908,1.82987520414164,1.62008011232702,1.88179466413022,0.655087691238533,2.56242258131159,3.05817786183743,1.30877970992015,1.03691978633434,2.4853572523477,6.20062232552609,4.18646328923141,3.14371131868485,3.50012139019286,2.45403664607689,4.39285926276023,6.21993364822496,5.07797100891405,3.67007705489988,4.59009829569411,3.45636007509439,1.26404448251271,1.01362607645082,0.616265742988964,0.649604114888975,1.07416017400489,1.78813219303138,2.40390899039938,1.47689527174577,1.11063094942962,1.5241361331,1.10908803650525,1.55932609183604,0.962118416403295,1.28564592399726,1.13365191807606,3.55177525398503,2.15313255862742,0.503653849092235,0.965947970160952,1.87682475451182,0.73260649706906,1.71494703263253,0,3.3885110557024,2.76195141904306,1.71868654031819,4.81188910562325,4.7955776383945,2.2661816921691,1.35004500046361,2.2516060161211,3.62513927187364,2.5888015587591,2.28332164685189,1.99512436700516,1.53660245178721,0.729320151204882,1.25767897576789,0.919217542250071,1.55572709461131,1.64828045791115,1.60459604795908,1.26348605881899,1.2673964994512,2.82939512079114,2.34103768674706,2.30490548657529,1.95280594449085,2.85776214769844,1.27472758539341,2.50781986602817,1.64834360321323,1.76638704161277,1.71434626192708,1.77475806159337,2.86123427936785,1.16277133305863,1.50575008664529,1.86152137361688,2.74391959309159,1.8414879800649,1.7654534799962,0.561142271657738,2.49133538060766,2.46261205938909,0.818462086339379,2.63392630016142,2.70069255373598,1.99848462350357,2.33931608445408,2.79332370262788,1.53030665655075,2.20591419119516,3.01428186306548 | ||
|short_description=p2@Skil | |short_description=p2@Skil | ||
}} | }} |
Latest revision as of 22:28, 1 October 2015
Short description: | p2@Skil |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Skil_5end |
Coexpression cluster: | NA |
Association with transcript: | -81bp_to_ENSMUST00000118470_5end |
EntrezGene: | Skil |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 3.29e-07 | 49 |
gonad | 3.73e-07 | 18 |
gonad primordium | 3.73e-07 | 18 |
male reproductive organ | 4.25e-07 | 15 |