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FFCP PHASE1:Mm9::chr10:17954736..17954814,-: Difference between revisions

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|description=CAGE_peak_1_at_Ccdc28a_5end
|description=CAGE_peak_1_at_Ccdc28a_5end
|id=chr10:17954736..17954814,-
|id=chr10:17954736..17954814,-
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=6.56610273129655,15.7038933437712,13.1949779422965,25.4069937497737,20.0358291978539,8.89760141133016,10.5125688267987,33.7011874182514,3.23814060948833,3.04283884218592,1.71217968225505,1.99430397488341,24.3105036502312,25.7890187136042,5.3297561890506,5.66930748691513,5.59649502502517,9.77932712610537,10.9691546884591,9.76096199135469,35.0378355422407,13.4042784121195,12.27639008953,17.4391740844813,19.0409703285751,13.7815671387605,12.9228598847722,11.8509177977239,25.6531616266105,15.6258680451157,10.8647950221099,9.52546010189447,2.46025915033828,31.6963362030877,21.3750198615943,15.2935873729813,16.9460565697766,28.0416192593728,12.5013655123808,24.6056159667685,54.1172968988533,18.442228093878,20.3914348273085,13.4709595233868,12.0638548151222,14.5001934207728,12.5182615095686,12.6454590700659,15.378032791413,12.6379434398284,6.29938897314131,5.75010257459886,11.2414346058683,20.3101399763176,31.5928171193916,7.97504251711436,11.1748041576115,9.7977697532714,2.63011399117477,4.7609188134483,3.80298842103708,5.76035704517525,8.89294796111139,15.7482450524245,6.92206453796882,13.4991221839759,8.98800331555214,9.60545763303886,4.87341177849845,6.75029691658453,6.09942387919008,5.14171771926846,5.74258206474195,4.40966877173835,4.79227355091182,10.1114066527102,53.9567816897005,39.7107621444934,53.608680106429,3.42904348098504,4.20843160571084,4.16730696445408,64.491272769319,51.7741601229146,45.3810795897126,2.94628585473668,4.6982654663704,3.16879057903011,2.19605960666234,5.51672388779534,11.5945795480671,17.2084775396277,8.83962733820076,34.5410042648203,20.7928453583254,19.2651561451854,13.0613310722529,7.49893419343454,7.79358013808606,6.71345191569646,6.61964072950398,11.5493829672886,10.1922095882658,0,6.49473123033642,5.32055717497707,8.08839112023653,17.127581957859,11.3932668804756,8.60964406575984,3.81667718885499,3.95805121805784,6.45723392316964,5.87818298155228,7.05532242814229,7.79132866243988,7.41584903203122,8.09756398751505,3.5384422077995,3.72063754879041,3.3126227769059,3.87900202508178,20.5030937339934,21.958559775866,26.8091784721222,19.9256503062701,6.70964697233154,10.1983464268879,13.2153036155987,37.148078572396,19.6725259212009,3.39266750704734,28.1595398711488,25.8272611903634,30.1292664611362,31.1503225090095,8.7581852911272,9.33052279575698,13.3943061969848,9.04899980311838,6.50602214813519,4.82794419310293,4.68161537493908,6.93242162044289,7.75616090325138,9.48041530107888,7.40243624021858,12.4177617954728,2.58681591519411,2.64748512234947,3.69497360744293,3.72632745126877,5.83899223373756,2.43776516565517,4.7329891373827,5.17489093728082,7.72434506044558,9.52187256324446,7.672414483681,2.89976081549703,3.28336483973535,4.50155153652537,4.49814997611899,5.3126342571799,4.9365476123961,4.41814495025775,4.02410102099429,4.32031766758527,3.94943639792353,4.59668899421467,9.64718833595683,12.2807989437279,9.87975518809728,10.0654814070279,25.8656636733877,3.80747065803352,31.3897843834608,16.3959351331397,5.11891801284562,4.87697010906921,8.11865006329188,11.0925938542838,14.0098167622268,14.4571475845545,16.1339880925134,16.3051965176771,19.604146286421,19.8956472041151,18.5215882763164,11.6846523125049,19.0201483889731,25.0918004300503,5.50036912763937,4.68418901699888,3.38123207019241,6.51684249105006,7.95205197387266,8.20589092716727,8.15751328902919,10.4803205065518,12.8738956829927,12.9567022117891,8.30067355844017,4.33797274861845,3.93117990226406,1.79889689907883,4.66578279193557,4.10001171579109,3.05551022137704,7.48009957372108,13.2950885955529,6.31491250332587,4.31304619582064,10.4199465347181,8.7370548472077,11.6186283855671,13.0960111870996,23.639732546805,9.05290631816363,3.97931964718018,3.58522948172457,3.22515662972857,5.39787571063555,8.20780661464897,6.66522194480839,6.24427673144956,5.2019597555043,8.41565820665345,4.9430978283821,8.1931657357869,7.25276923836761,6.65385669474953,10.5553898757491,17.4049818821987,5.90117127622843,5.79467167239938,52.8211441059836,40.9068786206789,2.78689407140348,7.57412781613119,7.57219726599016,6.24701990874622,8.83235930704476,6.93009514062401,12.0311284004493,7.07691326972081,9.31064613852257,7.3063964477828,7.90575555893047,17.6726724031994,9.509985708954,4.98583690268315,4.88660878060728,10.3931177472697,14.6019652173959,4.12727081463468,5.13950046840077,6.03536255218874,3.83892460745005,6.7635732547664,6.97756391554197,5.81653967164009,6.06045543254026,6.95280867458795,9.48767477174989,7.21948802737308,37.1079170271629,6.12207719706455,6.85601024048599,4.71541477069503,13.4778577568128,11.0588666913284,11.8475294833527,4.87143918583359,4.22409074514679,12.0744280392378,7.71849393192367,5.44124634706884,7.10443477461984,4.52346936961169,4.41677672811605,6.23735419031233,20.9866202373493,47.8397279187115,4.44264290074417,4.74689796315412,6.11141940320049,6.78126445216888,6.15124024744613,6.63456702298916,18.5276488693302,22.6721352764326,16.9985967779441,12.4107180341965,4.11236791655476,4.4730282767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|phase1_expression=6.56610273129655,15.7038933437712,13.1949779422965,25.4069937497737,20.0358291978539,8.89760141133016,10.5125688267987,33.7011874182514,3.23814060948833,3.04283884218592,1.71217968225505,1.99430397488341,24.3105036502312,25.7890187136042,5.3297561890506,5.66930748691513,5.59649502502517,9.77932712610537,10.9691546884591,9.76096199135469,35.0378355422407,13.4042784121195,12.27639008953,17.4391740844813,19.0409703285751,13.7815671387605,12.9228598847722,11.8509177977239,25.6531616266105,15.6258680451157,10.8647950221099,9.52546010189447,2.46025915033828,31.6963362030877,21.3750198615943,15.2935873729813,16.9460565697766,28.0416192593728,12.5013655123808,24.6056159667685,54.1172968988533,18.442228093878,20.3914348273085,13.4709595233868,12.0638548151222,14.5001934207728,12.5182615095686,12.6454590700659,15.378032791413,12.6379434398284,6.29938897314131,5.75010257459886,11.2414346058683,20.3101399763176,31.5928171193916,7.97504251711436,11.1748041576115,9.7977697532714,2.63011399117477,4.7609188134483,3.80298842103708,5.76035704517525,8.89294796111139,15.7482450524245,6.92206453796882,13.4991221839759,8.98800331555214,9.60545763303886,4.87341177849845,6.75029691658453,6.09942387919008,5.14171771926846,5.74258206474195,4.40966877173835,4.79227355091182,10.1114066527102,53.9567816897005,39.7107621444934,53.608680106429,3.42904348098504,4.20843160571084,4.16730696445408,64.491272769319,51.7741601229146,45.3810795897126,2.94628585473668,4.6982654663704,3.16879057903011,2.19605960666234,5.51672388779534,11.5945795480671,17.2084775396277,8.83962733820076,34.5410042648203,20.7928453583254,19.2651561451854,13.0613310722529,7.49893419343454,7.79358013808606,6.71345191569646,6.61964072950398,11.5493829672886,10.1922095882658,0,6.49473123033642,5.32055717497707,8.08839112023653,17.127581957859,11.3932668804756,8.60964406575984,3.81667718885499,3.95805121805784,6.45723392316964,5.87818298155228,7.05532242814229,7.79132866243988,7.41584903203122,8.09756398751505,3.5384422077995,3.72063754879041,3.3126227769059,3.87900202508178,20.5030937339934,21.958559775866,26.8091784721222,19.9256503062701,6.70964697233154,10.1983464268879,13.2153036155987,37.148078572396,19.6725259212009,3.39266750704734,28.1595398711488,25.8272611903634,30.1292664611362,31.1503225090095,8.7581852911272,9.33052279575698,13.3943061969848,9.04899980311838,6.50602214813519,4.82794419310293,4.68161537493908,6.93242162044289,7.75616090325138,9.48041530107888,7.40243624021858,12.4177617954728,2.58681591519411,2.64748512234947,3.69497360744293,3.72632745126877,5.83899223373756,2.43776516565517,4.7329891373827,5.17489093728082,7.72434506044558,9.52187256324446,7.672414483681,2.89976081549703,3.28336483973535,4.50155153652537,4.49814997611899,5.3126342571799,4.9365476123961,4.41814495025775,4.02410102099429,4.32031766758527,3.94943639792353,4.59668899421467,9.64718833595683,12.2807989437279,9.87975518809728,10.0654814070279,25.8656636733877,3.80747065803352,31.3897843834608,16.3959351331397,5.11891801284562,4.87697010906921,8.11865006329188,11.0925938542838,14.0098167622268,14.4571475845545,16.1339880925134,16.3051965176771,19.604146286421,19.8956472041151,18.5215882763164,11.6846523125049,19.0201483889731,25.0918004300503,5.50036912763937,4.68418901699888,3.38123207019241,6.51684249105006,7.95205197387266,8.20589092716727,8.15751328902919,10.4803205065518,12.8738956829927,12.9567022117891,8.30067355844017,4.33797274861845,3.93117990226406,1.79889689907883,4.66578279193557,4.10001171579109,3.05551022137704,7.48009957372108,13.2950885955529,6.31491250332587,4.31304619582064,10.4199465347181,8.7370548472077,11.6186283855671,13.0960111870996,23.639732546805,9.05290631816363,3.97931964718018,3.58522948172457,3.22515662972857,5.39787571063555,8.20780661464897,6.66522194480839,6.24427673144956,5.2019597555043,8.41565820665345,4.9430978283821,8.1931657357869,7.25276923836761,6.65385669474953,10.5553898757491,17.4049818821987,5.90117127622843,5.79467167239938,52.8211441059836,40.9068786206789,2.78689407140348,7.57412781613119,7.57219726599016,6.24701990874622,8.83235930704476,6.93009514062401,12.0311284004493,7.07691326972081,9.31064613852257,7.3063964477828,7.90575555893047,17.6726724031994,9.509985708954,4.98583690268315,4.88660878060728,10.3931177472697,14.6019652173959,4.12727081463468,5.13950046840077,6.03536255218874,3.83892460745005,6.7635732547664,6.97756391554197,5.81653967164009,6.06045543254026,6.95280867458795,9.48767477174989,7.21948802737308,37.1079170271629,6.12207719706455,6.85601024048599,4.71541477069503,13.4778577568128,11.0588666913284,11.8475294833527,4.87143918583359,4.22409074514679,12.0744280392378,7.71849393192367,5.44124634706884,7.10443477461984,4.52346936961169,4.41677672811605,6.23735419031233,20.9866202373493,47.8397279187115,4.44264290074417,4.74689796315412,6.11141940320049,6.78126445216888,6.15124024744613,6.63456702298916,18.5276488693302,22.6721352764326,16.9985967779441,12.4107180341965,4.11236791655476,4.4730282767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|short_description=p1@Ccdc28a
|short_description=p1@Ccdc28a
}}
}}

Revision as of 20:12, 17 April 2012

Short description:p1@Ccdc28a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ccdc28a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000052648, ENSMUST00000080860, ENSMUST00000173243, NM_144820, uc007eme.1, uc007emf.1_5end
EntrezGene:Ccdc28a
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Ccdc28a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I515.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I325.41
CD326+ enterocyte, pool2.CNhs13197.11849-124I420.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.51
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E933.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E424.31
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.78
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.97
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.76
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A335.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H213.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.28
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D117.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.04
GP2+ M cell, pool1.CNhs13228.11845-124H913.78
GP2+ M cell, pool2.CNhs13231.11846-124I112.92
GP2+ M cell, pool3.CNhs13240.11847-124I211.85
Ileum epithelium, pool1.CNhs13199.10252-104B925.65
Ileum epithelium, pool2.CNhs13232.10253-104C115.63
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I39.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F521.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F615.29
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G828.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H112.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H324.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G954.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H218.44
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H420.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.47
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.50
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B815.38
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.24
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I920.31
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A131.59
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D213.50
Mouse Microglia, donor1.CNhs12629.11718-123C88.99
Mouse Microglia, donor2.CNhs12634.11736-123E89.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D353.96
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F339.71
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D753.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E464.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E551.77
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I645.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D92.20
Mouse Schwann, donor2.CNhs12573.11746-123F95.52
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.59
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C834.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F619.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.62
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.49
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.13
accessory axillary lymph node, adult.CNhs10475.1063-29H911.39
adrenal gland, adult.CNhs10508.49-24D78.61
adrenal gland, embryo E14.CNhs11038.406-44C53.82
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I16.46
adrenal gland, embryo E18.CNhs11026.1262-18F55.88
adrenal gland, neonate N00.CNhs11191.1311-23C17.06
adrenal gland, neonate N25.CNhs11223.1377-27I37.79
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H18.10
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F53.72
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B221.96
cerebellum, neonate N30.CNhs11135.1395-42I226.81
colon, adult.CNhs10468.36-18H719.93
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.22
corpora quadrigemina, adult.CNhs10501.16-22A437.15
corpus striatum, adult.CNhs10487.19-21D819.67
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D528.16
cortex, neonate N30.CNhs11107.1392-42F225.83
diencephalon, adult.CNhs10482.20-12F230.13
diencephalon, neonate N30.CNhs11201.1388-42B231.15
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.76
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.33
epididymis, adult.CNhs10490.58-23B213.39
eyeball, adult.CNhs10484.31-12G49.05
eyeball, embryo E12.CNhs11016.345-16C66.51
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D46.93
eyeball, neonate N00.CNhs11207.633-15C67.76
eyeball, neonate N01.CNhs11140.1532-43E79.48
eyeball, neonate N02.CNhs11205.1551-44G87.40
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I65.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.52
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.67
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I94.50
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C85.31
heart, embryo E16.CNhs11021.457-17C64.94
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E34.32
heart, neonate N03.CNhs11221.1349-25I23.95
heart, neonate N10.CNhs11118.749-24G14.60
heart, neonate N16.CNhs11209.782-15G19.65
heart, neonate N20.CNhs11127.821-26I612.28
heart, neonate N25.CNhs11196.1351-25D39.88
heart, neonate N30.CNhs11202.1390-42D210.07
hippocampus, adult.CNhs10478.13-16E825.87
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I331.39
intestine, adult.CNhs10496.178-9A316.40
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D88.12
intestine, embryo E16.CNhs10585.463-22H411.09
intestine, embryo E17.CNhs10582.482-18D314.01
intestine, embryo E18.CNhs10526.1289-20F714.46
intestine, neonate N00.CNhs11126.644-26D116.13
intestine, neonate N01.CNhs11192.1322-23E916.31
intestine, neonate N06.CNhs11102.688-20B819.60
intestine, neonate N07.CNhs11095.720-20F219.90
intestine, neonate N10.CNhs11098.755-23A518.52
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E319.02
intestine, neonate N30.CNhs11131.1384-42G125.09
kidney, embryo E14.CNhs10606.411-4I95.50
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I26.52
kidney, embryo E18.CNhs11001.1288-20C77.95
kidney, neonate N00.CNhs11214.646-21G78.21
kidney, neonate N10.CNhs11206.758-6D58.16
kidney, neonate N20.CNhs11113.832-19I110.48
kidney, neonate N25.CNhs11122.1353-25F312.87
kidney, neonate N30.CNhs11203.1385-42H112.96
liver, adult pregnant day01.CNhs10466.508-5B28.30
liver, embryo E12.CNhs10601.355-15F84.34
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D74.67
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F413.30
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H210.42
liver, neonate N10.CNhs11115.751-24B98.74
liver, neonate N20.CNhs11220.823-25A311.62
liver, neonate N25.CNhs11198.1368-26H113.10
liver, neonate N30.CNhs11106.1382-42D123.64
lung, adult.CNhs10474.28-22B19.05
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A68.21
lung, embryo E18.CNhs10583.1287-20I66.67
lung, neonate N00.CNhs11224.640-42C66.24
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A38.42
lung, neonate N10.CNhs11219.750-23E64.94
lung, neonate N20.CNhs11109.822-18A48.19
lung, neonate N25.CNhs11119.1359-25C77.25
lung, neonate N30.CNhs11133.1394-42H26.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.40
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C252.82
medulla oblongata, neonate N30.CNhs11200.1396-42A340.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.03
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.31
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.31
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I917.67
ovary, adult.CNhs10507.91-2I79.51
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I44.89
oviduct, adult pregnant day01.CNhs10500.988-6G610.39
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G96.98
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G837.11
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C76.86
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B913.48
pituitary gland, embryo E16.CNhs11036.449-43F611.06
pituitary gland, embryo E17.CNhs11039.1265-44F511.85
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G312.07
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C35.44
skin, neonate N00.CNhs11124.650-25G47.10
skin, neonate N03.CNhs11215.662-22H34.52
skin, neonate N06.CNhs11097.693-20I54.42
skin, neonate N10.CNhs11108.762-6C46.24
small intestine, neonate N16.CNhs11114.790-21I120.99
spinal cord, adult.CNhs10505.24-13C947.84
spleen, adult.CNhs10465.25-2G24.44
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F26.11
spleen, neonate N10.CNhs11116.752-24D16.78
spleen, neonate N20.CNhs11112.824-19H16.15
spleen, neonate N25.CNhs11099.1354-25G36.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C618.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C922.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.00
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D45.94
stomach, embryo E17.CNhs11006.1035-18D54.39
stomach, embryo E18.CNhs10999.1286-20C65.46
stomach, neonate N03.CNhs11193.1340-24B83.37
stomach, neonate N07.CNhs11210.718-18A96.69
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I113.61
submandibular gland, adult.CNhs10469.59-29C112.43
testis, adult.CNhs10504.57-7G5170.24
testis, embryo E13.CNhs11031.389-23F54.93
testis, embryo E15.CNhs11034.443-27C55.79
testis, embryo E16.CNhs11033.470-26G59.33
testis, embryo E17.CNhs11029.486-18I55.94
testis, embryo E18.CNhs11027.503-18G57.27
testis, neonate N00.CNhs11189.1300-22B77.63
testis, neonate N07.CNhs11222.726-26I47.16
testis, neonate N10.CNhs11204.763-44D910.38
testis, neonate N20.CNhs11110.839-18H318.12
testis, neonate N30.CNhs11130.1391-42E273.74
thymus, adult.CNhs10471.38-12B512.64
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I25.34
thymus, embryo E16.CNhs11002.456-26C56.50
thymus, embryo E17.CNhs10581.478-18C18.06
thymus, embryo E18.CNhs10595.1273-19G412.52
thymus, neonate N02.CNhs11181.1541-43F810.10
thymus, neonate N03.CNhs11137.2104-43C710.93
thymus, neonate N06.CNhs11197.681-26C411.11
thymus, neonate N07.CNhs11211.713-19D314.71
thymus, neonate N10.CNhs11194.748-24E414.42
thymus, neonate N20.CNhs11186.820-7A211.11
thymus, neonate N25.CNhs11125.1362-25G713.28
thymus, neonate N30.CNhs11132.1393-42G222.56
tongue, adult.CNhs10499.32-1B410.66
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.50
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E49.27
uterus, adult pregnant day19.CNhs10497.590-15F56.01
uterus, adult.CNhs10509.92-27E58.97
vagina, adult.CNhs10502.89-27D57.93
vesicular gland, adult.CNhs10491.51-27F810.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A117.51
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.79
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.88
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A531.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A732.42
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.03
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.73
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C65.74
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B46.49





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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