Personal tools

FFCP PHASE1:Mm9::chr16:45158960..45158975,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr16:45158960..45158975,+
|short_description=p6@Atg3
|description=CAGE_peak_6_at_Atg3_5end
|association_with_transcript=18bp_to_NM_026402,uc007zii.1_5end
|EntrezGene=67841
|EntrezGene=67841
|HGNC=
|HGNC=
|UniProt=Q9CPX6
|UniProt=Q9CPX6
|association_with_transcript=18bp_to_NM_026402,uc007zii.1_5end
|description=CAGE_peak_6_at_Atg3_5end
|id=chr16:45158960..45158975,+
|ontology_enrichment_disease=
|phase1_expression=0.320297694209588,2.44282785347553,2.27499619694768,0.30246421130683,0,1.34303417529512,0.467225281191051,2.1950964985068,2.25261955442667,2.34064526321993,1.02730780935303,1.91453181588807,3.25281386869291,2.88487327982691,1.66554880907831,0.809901069559304,0,2.20823515750766,1.50825876966313,1.27316895539409,0.0850432901510698,0.893618560807968,1.30599894569468,1.27993938234725,0.91763712426868,2.29692785646008,2.58457197695445,2.80112602491656,0,0.504060259519861,1.99557459589774,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,17.5783284909501,21.0960543021426,22.5115209908733,22.3527965451785,19.1252735788365,18.934903768215,1.00717454380462,0.608261587317087,2.0190142737785,0.782391344348039,0.65407546914134,0.439372365468944,0.777719596297134,1.67983705950435,0,1.67782606057736,1.45072428402269,1.68046899571232,3.08711323243136,3.43840127926508,2.06268836910977,1.01158230429799,0,1.90149421051854,1.0165335962074,0,4.94944844504769,3.9554654502679,6.3943210345149,1.49800055259202,0.768436610643109,1.24427534770173,1.21505344498522,1.47227472945967,1.14260393761521,1.54607978666129,0.367472397644862,0.958454710182364,0,0,0.638436690425939,0.46081959976873,0.923204014111357,1.09785172322892,3.12548022334056,0.837548997004143,0,0.30559649555362,0.294628585473668,0.854230084794618,0.931997229126503,3.48340489332647,2.11600368298999,3.18850937571846,4.30211938490693,1.3599426674155,1.07940638327563,0.649776417447669,0.448026887097336,1.12355536105401,0.852151612890289,1.55871602761721,1.06001872353102,0.985903938436763,1.28326477414318,2.54805239706646,14.2213340630666,0.432982082022428,0,1.01104889002957,1.59857431606684,4.14300613835475,1.03909497345377,1.04091196059682,1.21786191324856,0.691846491768175,0.150722640552623,1.29347577849275,0.628332956648377,1.23597483867187,1.59059292611903,1.76922110389975,1.94120219936891,1.54589062922275,0.969750506270444,0,0.292780797011547,0.628340120440365,0.510914110417183,2.39630249011841,3.59941638596045,3.81210681219194,0,0.457500602818626,2.63874139437015,0.869121600961382,0.511430914660661,0.20778804455956,1.29793010454206,1.62942982160506,1.99051152976149,1.26361379216837,0.841767423545896,0.910843100738926,0.459804208866946,1.26043490863744,0.60281927134286,0.680364991513279,1.2811372028485,1.12442069471675,0.776110112217047,0,0.945530400839096,0.879755620819744,0.876782929710299,0.834141747676794,1.74126083261083,0.823128545631774,0.59710280045548,3.51106593656617,4.63226232806487,1.70498099637356,1.86413195281952,1.17263029990548,0.720248245844059,0.473489471170421,1.18058539048442,1.85120535464854,1.86027155800326,0.804820204198858,0.934122738937356,0.987359099480883,1.31333971263276,0.891756905004413,0.438599962275997,0.219550115291051,0.671032093801859,0.841159794256509,1.3377599609307,1.32167513193519,0.793351699990633,1.06644125267617,0.696710015581316,0.644337306610467,1.4117846723634,0.444756087689741,1.33157938278791,1.89811624617805,1.15289268306808,0.502670417600539,1.59165177632921,1.16978452271472,1.79763881730844,0.864552199498777,0.199141273254367,0.758671603812327,1.14248512609729,1.1270773567308,1.22190796707189,0.969762435838129,1.05203729835478,1.13825766823663,1.91893192373483,1.41298855057237,0.740382983530803,2.37162101669719,0.83422552858047,0.982794975566015,1.34917267430912,0.608580364165509,1.4470629585145,2.03700681425136,1.72617682470486,0.972811360650212,1.09824565275233,2.87536413054709,1.11642284300551,2.18426371180192,1.26289438973556,1.79397413521912,0.482443521363367,3.69506380333209,0.757965647081939,1.79261474086228,1.01847051465113,0.469380496577004,1.00503754465089,1.19021820443007,2.34160377429359,2.36452716159286,4.20782910332672,2.23236676120482,2.13022309130459,0.518054945597687,1.3018415272336,4.52373851817817,6.52686820582452,1.47529281905711,2.48343071674259,0.642202359951168,0.117211686592203,0.983609672260053,0.504941854408746,0.94652465824877,0.780877488593277,0.861693590931196,2.15071918157297,2.22798674082394,0.849229592366497,2.83367491172426,1.46127928955656,0.395287777946524,0.642642632843614,0.99358059645788,0.712262414669021,1.46598263418218,1.64970122972535,0,0.971122544619926,1.51161778482376,1.50884063804718,0.590603785761546,1.22974059177571,1.29214146584111,1.45413491791002,3.20847640546249,1.26414703174326,3.16255825724996,3.09406629744561,0.340439605753788,1.08036656418786,0.517434735131018,0.643011105094777,0.886701168211368,0.356737635204141,1.15184314421485,0.304464949114599,1.87737366450968,1.48282449604674,1.7642271844397,1.48397627647332,1.93757312035087,1.20625849856312,0.835606408021955,0.820704498725306,0.582961673259701,0.741701208042039,2.05045056957423,1.44470807574256,1.29636169158798,0.565105371014073,0.956859594047176,2.0590035588587,3.22959016988325,2.51912614182584,2.3493995546752,0.954670618015114,0.949007980743406,1.62655573701479,0.540026704109006,0.627264888043406,0.87345025498471,0.674321731924103,1.32245529160537,0,0.518459893167171,1.86401793926078,1.69107881605257,0.299033092087958,1.15820943319968,0.388902376688095,1.03327858782185,0.675824501963113,0.469428954583016,1.3020438484395,1.25831213310853,0.483168241652012,0.288030006257865,3.16011120628178,1.41907650703115,0.718976700153791,1.42912905275575,1.43221356533985,1.58945083825012,2.16351809135944,1.18151621739662,1.9183625490148,1.67654974641,2.82313318383153,2.0466154955348,2.50150788264857,1.40252282617883,0.453460767230423,0.443971906748129,1.52513556236109,2.01461539636894,0.386379188064381,1.87682475451182,1.64836461840539,0.428736758158132,0.501572104035363,1.12950368523413,1.38097570952153,1.14579102687879,1.3748254587495,0.685082519770642,1.5107877947794,0,0.900642406448441,1.35942722695261,0.51776031175182,1.14166082342594,0.798049746802062,0.170733605754134,1.21553358534147,1.04806581313991,1.10306105070008,0.222246727801615,0.206035057238894,1.60459604795908,1.26348605881899,1.52087579934144,1.88626341386076,1.12369808963859,2.04880487695582,1.43588672389033,0.952587382566147,2.20180219295225,2.70072908649187,1.23625770240992,1.91358596174717,1.71434626192708,0.887379030796687,1.1921809497366,1.30811774969096,0.564656282491984,1.18460451048347,0.548783918618318,0.526139422875686,1.62964936615034,0.561142271657738,1.06771516311757,1.37906275325789,0,1.39443157067369,0.385813221962283,2.49810577937946,0.467863216890817,1.50409737833809,1.14772999241306,0.882365676478062,1.39120701372253
|phase1_expression=0.320297694209588,2.44282785347553,2.27499619694768,0.30246421130683,0,1.34303417529512,0.467225281191051,2.1950964985068,2.25261955442667,2.34064526321993,1.02730780935303,1.91453181588807,3.25281386869291,2.88487327982691,1.66554880907831,0.809901069559304,0,2.20823515750766,1.50825876966313,1.27316895539409,0.0850432901510698,0.893618560807968,1.30599894569468,1.27993938234725,0.91763712426868,2.29692785646008,2.58457197695445,2.80112602491656,0,0.504060259519861,1.99557459589774,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,17.5783284909501,21.0960543021426,22.5115209908733,22.3527965451785,19.1252735788365,18.934903768215,1.00717454380462,0.608261587317087,2.0190142737785,0.782391344348039,0.65407546914134,0.439372365468944,0.777719596297134,1.67983705950435,0,1.67782606057736,1.45072428402269,1.68046899571232,3.08711323243136,3.43840127926508,2.06268836910977,1.01158230429799,0,1.90149421051854,1.0165335962074,0,4.94944844504769,3.9554654502679,6.3943210345149,1.49800055259202,0.768436610643109,1.24427534770173,1.21505344498522,1.47227472945967,1.14260393761521,1.54607978666129,0.367472397644862,0.958454710182364,0,0,0.638436690425939,0.46081959976873,0.923204014111357,1.09785172322892,3.12548022334056,0.837548997004143,0,0.30559649555362,0.294628585473668,0.854230084794618,0.931997229126503,3.48340489332647,2.11600368298999,3.18850937571846,4.30211938490693,1.3599426674155,1.07940638327563,0.649776417447669,0.448026887097336,1.12355536105401,0.852151612890289,1.55871602761721,1.06001872353102,0.985903938436763,1.28326477414318,2.54805239706646,14.2213340630666,0.432982082022428,0,1.01104889002957,1.59857431606684,4.14300613835475,1.03909497345377,1.04091196059682,1.21786191324856,0.691846491768175,0.150722640552623,1.29347577849275,0.628332956648377,1.23597483867187,1.59059292611903,1.76922110389975,1.94120219936891,1.54589062922275,0.969750506270444,0,0.292780797011547,0.628340120440365,0.510914110417183,2.39630249011841,3.59941638596045,3.81210681219194,0,0.457500602818626,2.63874139437015,0.869121600961382,0.511430914660661,0.20778804455956,1.29793010454206,1.62942982160506,1.99051152976149,1.26361379216837,0.841767423545896,0.910843100738926,0.459804208866946,1.26043490863744,0.60281927134286,0.680364991513279,1.2811372028485,1.12442069471675,0.776110112217047,0,0.945530400839096,0.879755620819744,0.876782929710299,0.834141747676794,1.74126083261083,0.823128545631774,0.59710280045548,3.51106593656617,4.63226232806487,1.70498099637356,1.86413195281952,1.17263029990548,0.720248245844059,0.473489471170421,1.18058539048442,1.85120535464854,1.86027155800326,0.804820204198858,0.934122738937356,0.987359099480883,1.31333971263276,0.891756905004413,0.438599962275997,0.219550115291051,0.671032093801859,0.841159794256509,1.3377599609307,1.32167513193519,0.793351699990633,1.06644125267617,0.696710015581316,0.644337306610467,1.4117846723634,0.444756087689741,1.33157938278791,1.89811624617805,1.15289268306808,0.502670417600539,1.59165177632921,1.16978452271472,1.79763881730844,0.864552199498777,0.199141273254367,0.758671603812327,1.14248512609729,1.1270773567308,1.22190796707189,0.969762435838129,1.05203729835478,1.13825766823663,1.91893192373483,1.41298855057237,0.740382983530803,2.37162101669719,0.83422552858047,0.982794975566015,1.34917267430912,0.608580364165509,1.4470629585145,2.03700681425136,1.72617682470486,0.972811360650212,1.09824565275233,2.87536413054709,1.11642284300551,2.18426371180192,1.26289438973556,1.79397413521912,0.482443521363367,3.69506380333209,0.757965647081939,1.79261474086228,1.01847051465113,0.469380496577004,1.00503754465089,1.19021820443007,2.34160377429359,2.36452716159286,4.20782910332672,2.23236676120482,2.13022309130459,0.518054945597687,1.3018415272336,4.52373851817817,6.52686820582452,1.47529281905711,2.48343071674259,0.642202359951168,0.117211686592203,0.983609672260053,0.504941854408746,0.94652465824877,0.780877488593277,0.861693590931196,2.15071918157297,2.22798674082394,0.849229592366497,2.83367491172426,1.46127928955656,0.395287777946524,0.642642632843614,0.99358059645788,0.712262414669021,1.46598263418218,1.64970122972535,0,0.971122544619926,1.51161778482376,1.50884063804718,0.590603785761546,1.22974059177571,1.29214146584111,1.45413491791002,3.20847640546249,1.26414703174326,3.16255825724996,3.09406629744561,0.340439605753788,1.08036656418786,0.517434735131018,0.643011105094777,0.886701168211368,0.356737635204141,1.15184314421485,0.304464949114599,1.87737366450968,1.48282449604674,1.7642271844397,1.48397627647332,1.93757312035087,1.20625849856312,0.835606408021955,0.820704498725306,0.582961673259701,0.741701208042039,2.05045056957423,1.44470807574256,1.29636169158798,0.565105371014073,0.956859594047176,2.0590035588587,3.22959016988325,2.51912614182584,2.3493995546752,0.954670618015114,0.949007980743406,1.62655573701479,0.540026704109006,0.627264888043406,0.87345025498471,0.674321731924103,1.32245529160537,0,0.518459893167171,1.86401793926078,1.69107881605257,0.299033092087958,1.15820943319968,0.388902376688095,1.03327858782185,0.675824501963113,0.469428954583016,1.3020438484395,1.25831213310853,0.483168241652012,0.288030006257865,3.16011120628178,1.41907650703115,0.718976700153791,1.42912905275575,1.43221356533985,1.58945083825012,2.16351809135944,1.18151621739662,1.9183625490148,1.67654974641,2.82313318383153,2.0466154955348,2.50150788264857,1.40252282617883,0.453460767230423,0.443971906748129,1.52513556236109,2.01461539636894,0.386379188064381,1.87682475451182,1.64836461840539,0.428736758158132,0.501572104035363,1.12950368523413,1.38097570952153,1.14579102687879,1.3748254587495,0.685082519770642,1.5107877947794,0,0.900642406448441,1.35942722695261,0.51776031175182,1.14166082342594,0.798049746802062,0.170733605754134,1.21553358534147,1.04806581313991,1.10306105070008,0.222246727801615,0.206035057238894,1.60459604795908,1.26348605881899,1.52087579934144,1.88626341386076,1.12369808963859,2.04880487695582,1.43588672389033,0.952587382566147,2.20180219295225,2.70072908649187,1.23625770240992,1.91358596174717,1.71434626192708,0.887379030796687,1.1921809497366,1.30811774969096,0.564656282491984,1.18460451048347,0.548783918618318,0.526139422875686,1.62964936615034,0.561142271657738,1.06771516311757,1.37906275325789,0,1.39443157067369,0.385813221962283,2.49810577937946,0.467863216890817,1.50409737833809,1.14772999241306,0.882365676478062,1.39120701372253
|short_description=p6@Atg3
}}
}}

Revision as of 00:38, 18 April 2012

Short description:p6@Atg3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Atg3_5end
Coexpression cluster:NA
Association with transcript: 18bp_to_NM_026402, uc007zii.1_5end
EntrezGene:Atg3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Atg3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G817.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H322.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G922.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H219.13
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H418.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D93.48
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.81
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D31.68
thymus, neonate N10.CNhs11194.748-24E42.82
thymus, neonate N20.CNhs11186.820-7A22.05
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:45158960..45158975,%2B&oldid=790996"