Personal tools

FFCP PHASE1:Mm9::chr17:34257323..34257367,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr17:34257323..34257367,-
|short_description=p2@Brd2
|description=CAGE_peak_2_at_Brd2_5end
|association_with_transcript=0bp_to_ENSMUST00000114241,ENSMUST00000154232,uc008cbh.1,uc008cbk.1_5end
|EntrezGene=14312
|EntrezGene=14312
|HGNC=
|HGNC=
|UniProt=F8WIU6,Q3TH63,Q7JJ13
|UniProt=F8WIU6,Q3TH63,Q7JJ13
|association_with_transcript=0bp_to_ENSMUST00000114241,ENSMUST00000154232,uc008cbh.1,uc008cbk.1_5end
|description=CAGE_peak_2_at_Brd2_5end
|id=chr17:34257323..34257367,-
|ontology_enrichment_disease=
|phase1_expression=6.72625157840135,1.39590163055744,4.54999239389536,1.81478526784098,4.00716583957078,2.35030980676646,3.97141489012394,5.16493293766305,1.68946466582,3.7450324211519,0.856089841127525,1.35612670292072,2.9104124088305,3.93391810885488,2.99798785634096,2.63217847606774,0.699561878128147,4.25873923233621,5.21034847701807,7.21462408056651,4.08207792725135,2.48227378002213,1.30599894569468,2.23989391910769,1.14704640533585,2.29692785646008,1.7230479846363,2.37018355954478,1.90023419456374,1.51218077855958,1.99557459589774,6.35030673459631,3.07532393792285,0,0.577703239502549,0.831173226792462,3.26670970019791,5.4409111995798,2.3440060335714,1.57057123192139,5.88231488031014,5.46436387966757,3.88408282424923,4.28049181116963,3.75094645512204,3.12029478674859,7.82391344348039,13.0815093828268,9.22681967484782,11.2769341463084,9.09911740564856,8.62515386189829,3.02008690903925,2.17608642603403,1.00828139742739,2.31533492432352,4.87106847895886,5.15672092277442,9.1042407386819,12.1667925232568,9.50747105259269,6.43804610931351,3.55717918444456,6.74924787961049,2.96659908770092,5.6838409195688,7.78960287347852,5.76327457982332,6.11768712620018,7.42532660824299,6.30974884054146,9.42648248532552,9.718215801871,6.24703075996266,6.90087391331302,4.5960939330501,17.6185409599022,12.257984456178,8.44835932909339,9.49581271657396,9.88066550906024,7.8137005583514,7.53794097303729,15.757353080887,11.0014738399303,11.1958862479994,7.97281412474976,7.45597783301202,2.27178579999552,4.30757892608677,6.95674772884027,3.44169550792555,0.679971333707751,0.539703191637817,0.649776417447669,1.79210754838934,2.94933282276679,4.94247935476367,3.37721805983729,3.5333957451034,5.7745802108439,3.84979432242953,20.3844191765317,14.2213340630666,2.38140145112336,2.28023878927589,1.51657333504435,3.88225191044804,4.66088190564909,8.31275978763019,4.3371331691534,6.39377504455497,5.30415643688935,4.06951129492081,9.8774513993992,8.79666139307728,5.6854842578906,13.3031408366319,2.65383165584962,8.41187619726528,9.27534377533653,4.84875253135222,3.72783522436244,22.2513405728776,22.4107976290397,3.0654846625031,1.43778149407104,1.79970819298022,2.41433431438823,9.13722900369418,9.15001205637253,5.15182843662744,9.90798625095976,9.71718737855256,9.97382613885888,11.0324058886075,8.35082783572594,6.96679035416521,6.82351447770922,8.20723237957248,5.85541993332167,5.28774840196988,4.14142898552303,4.21973489940002,8.91278138882395,6.27757229395764,6.74652416830048,11.1242449417777,6.68260778091811,5.8622884852024,7.74184946321375,8.11024209982027,6.39508673218875,6.268538997399,6.99659263787008,5.57295947091781,0.702213187313235,1.54408744268829,1.70498099637356,3.72826390563903,2.34526059981096,2.88099298337624,5.20838418287463,3.93528463494808,5.24508183817086,3.25547522650571,3.48755421819505,7.00592054203017,8.22799249567402,6.7308660272429,7.37726166867287,5.99419948443863,5.04965265169416,8.05238512562231,6.72927835405207,9.98174740079059,5.28670052774077,2.11560453330835,5.33220626338085,5.57368012465052,3.8660238396628,6.05050573870028,4.44756087689741,2.85338439168839,3.79623249235609,4.6115707322723,4.52403375840485,5.37182474511107,3.8992817423824,2.69645822596266,3.6743468478698,3.78368419183298,6.2590407314517,4.68418901699888,7.88954149711563,5.7022371796688,3.29719228184964,10.2398297039865,5.94423448968019,3.98547399544926,4.39596437955849,7.28043267138623,2.37162101669719,3.83743743147016,2.55526693647164,1.79889689907883,1.62288097110802,3.37648023653384,1.52775511068852,2.87696137450811,3.72911021582581,0.823684239564244,4.31304619582064,4.83783231969054,1.87222603868736,4.2938409251009,1.07638448113147,0.964887042726734,11.6394509804961,3.97931964718018,5.37784422258685,5.60158783058121,7.27539769694356,8.04030035720716,13.3304438896168,17.5620283072019,12.4531763843891,13.2878813789265,15.3076577911188,11.6342953448174,6.56202931090403,10.5593812764503,9.04747703635634,4.35124547054968,2.95058563811422,6.89841865761831,7.38532713943843,9.84578167374507,3.60656879828686,7.06918596172244,4.73262329124385,5.46614242015294,10.5557464889071,8.12493913038677,6.90675889655422,15.0030561318081,5.26253912177363,8.18316402151673,5.13874111330481,11.2462460747632,11.639086987078,9.25941139069727,13.0309567482861,11.71287873105,7.96470830039777,4.61283208694465,5.13950046840077,2.07465587731488,5.31543407185391,5.84126781093462,7.23599220871019,7.99774204850512,2.49548164869305,4.74055136903724,2.10837217149998,6.18813259489121,10.2131881726136,7.56256594931503,9.31382523235832,6.00143698088458,6.20690817747958,6.59964625127661,7.40470592709544,7.30715877875038,6.57080782578389,6.35496212591461,5.73373834942901,8.244312647074,8.55761461488299,4.644095219468,4.65552141612232,5.58079059133208,5.24665505933731,11.4963687246516,5.29699730473343,5.77883230297023,2.77791791054568,3.39063222608444,4.23752105935178,4.80434163733698,1.35982743995084,1.11961161858926,1.52019971184866,8.59203556213602,7.43389584915668,5.69294507955176,3.67218158794124,4.39085421630384,7.20596460362386,4.18079473792944,10.579642332843,4.71160695571253,5.57344385154709,8.69875038321696,2.25477175473676,5.38259565758324,6.6183396182839,6.41688921535357,6.45799117388655,5.06868376472335,9.27122185301456,10.0257376329842,7.44501345422547,2.65742532908607,4.89651010638371,4.4241556887945,3.44632865993279,3.08132871494482,3.24802057444488,5.37080087002444,2.98022032171897,3.72605893511903,2.80610101631697,2.92802704849628,3.50551310612999,2.31900225814733,3.21611006441183,2.98256709085021,3.74006086981021,10.6563280299149,2.44184548711471,1.25599399253266,1.17519231454855,11.3981860478992,7.88266396894964,8.05867146775966,7.5028932677673,10.0314420807073,11.2950368523413,10.5874804396651,10.3121192419091,7.90524638780963,6.16574267793578,3.0215755895588,8.77529250301348,9.00642406448441,7.70342095273148,14.497288729051,5.60451676954554,7.18244772121856,5.29274177837816,5.59145449257076,4.82110274044359,6.06683577885047,5.33392146723877,4.73880631649457,6.4183841918363,5.30664144703975,6.08350319736575,6.03604292435444,4.30750934361459,5.18603734479441,5.34149861287203,5.23923060411381,7.06894388263618,6.55891349576597,4.53294490883637,6.47675248591348,4.4573002810104,5.85670160325814,4.05341522910446,6.83128158171944,4.23492211868988,4.23073039458383,4.93905526756486,3.6829759601298,5.16055632614275,5.61142271657738,5.57584585183618,5.71325997778268,4.09231043169689,3.87342102964915,5.40138510747196,9.49280196164194,7.01794825336225,6.66100267549725,10.3295699317175,11.0295709559758,7.88350641109433
|phase1_expression=6.72625157840135,1.39590163055744,4.54999239389536,1.81478526784098,4.00716583957078,2.35030980676646,3.97141489012394,5.16493293766305,1.68946466582,3.7450324211519,0.856089841127525,1.35612670292072,2.9104124088305,3.93391810885488,2.99798785634096,2.63217847606774,0.699561878128147,4.25873923233621,5.21034847701807,7.21462408056651,4.08207792725135,2.48227378002213,1.30599894569468,2.23989391910769,1.14704640533585,2.29692785646008,1.7230479846363,2.37018355954478,1.90023419456374,1.51218077855958,1.99557459589774,6.35030673459631,3.07532393792285,0,0.577703239502549,0.831173226792462,3.26670970019791,5.4409111995798,2.3440060335714,1.57057123192139,5.88231488031014,5.46436387966757,3.88408282424923,4.28049181116963,3.75094645512204,3.12029478674859,7.82391344348039,13.0815093828268,9.22681967484782,11.2769341463084,9.09911740564856,8.62515386189829,3.02008690903925,2.17608642603403,1.00828139742739,2.31533492432352,4.87106847895886,5.15672092277442,9.1042407386819,12.1667925232568,9.50747105259269,6.43804610931351,3.55717918444456,6.74924787961049,2.96659908770092,5.6838409195688,7.78960287347852,5.76327457982332,6.11768712620018,7.42532660824299,6.30974884054146,9.42648248532552,9.718215801871,6.24703075996266,6.90087391331302,4.5960939330501,17.6185409599022,12.257984456178,8.44835932909339,9.49581271657396,9.88066550906024,7.8137005583514,7.53794097303729,15.757353080887,11.0014738399303,11.1958862479994,7.97281412474976,7.45597783301202,2.27178579999552,4.30757892608677,6.95674772884027,3.44169550792555,0.679971333707751,0.539703191637817,0.649776417447669,1.79210754838934,2.94933282276679,4.94247935476367,3.37721805983729,3.5333957451034,5.7745802108439,3.84979432242953,20.3844191765317,14.2213340630666,2.38140145112336,2.28023878927589,1.51657333504435,3.88225191044804,4.66088190564909,8.31275978763019,4.3371331691534,6.39377504455497,5.30415643688935,4.06951129492081,9.8774513993992,8.79666139307728,5.6854842578906,13.3031408366319,2.65383165584962,8.41187619726528,9.27534377533653,4.84875253135222,3.72783522436244,22.2513405728776,22.4107976290397,3.0654846625031,1.43778149407104,1.79970819298022,2.41433431438823,9.13722900369418,9.15001205637253,5.15182843662744,9.90798625095976,9.71718737855256,9.97382613885888,11.0324058886075,8.35082783572594,6.96679035416521,6.82351447770922,8.20723237957248,5.85541993332167,5.28774840196988,4.14142898552303,4.21973489940002,8.91278138882395,6.27757229395764,6.74652416830048,11.1242449417777,6.68260778091811,5.8622884852024,7.74184946321375,8.11024209982027,6.39508673218875,6.268538997399,6.99659263787008,5.57295947091781,0.702213187313235,1.54408744268829,1.70498099637356,3.72826390563903,2.34526059981096,2.88099298337624,5.20838418287463,3.93528463494808,5.24508183817086,3.25547522650571,3.48755421819505,7.00592054203017,8.22799249567402,6.7308660272429,7.37726166867287,5.99419948443863,5.04965265169416,8.05238512562231,6.72927835405207,9.98174740079059,5.28670052774077,2.11560453330835,5.33220626338085,5.57368012465052,3.8660238396628,6.05050573870028,4.44756087689741,2.85338439168839,3.79623249235609,4.6115707322723,4.52403375840485,5.37182474511107,3.8992817423824,2.69645822596266,3.6743468478698,3.78368419183298,6.2590407314517,4.68418901699888,7.88954149711563,5.7022371796688,3.29719228184964,10.2398297039865,5.94423448968019,3.98547399544926,4.39596437955849,7.28043267138623,2.37162101669719,3.83743743147016,2.55526693647164,1.79889689907883,1.62288097110802,3.37648023653384,1.52775511068852,2.87696137450811,3.72911021582581,0.823684239564244,4.31304619582064,4.83783231969054,1.87222603868736,4.2938409251009,1.07638448113147,0.964887042726734,11.6394509804961,3.97931964718018,5.37784422258685,5.60158783058121,7.27539769694356,8.04030035720716,13.3304438896168,17.5620283072019,12.4531763843891,13.2878813789265,15.3076577911188,11.6342953448174,6.56202931090403,10.5593812764503,9.04747703635634,4.35124547054968,2.95058563811422,6.89841865761831,7.38532713943843,9.84578167374507,3.60656879828686,7.06918596172244,4.73262329124385,5.46614242015294,10.5557464889071,8.12493913038677,6.90675889655422,15.0030561318081,5.26253912177363,8.18316402151673,5.13874111330481,11.2462460747632,11.639086987078,9.25941139069727,13.0309567482861,11.71287873105,7.96470830039777,4.61283208694465,5.13950046840077,2.07465587731488,5.31543407185391,5.84126781093462,7.23599220871019,7.99774204850512,2.49548164869305,4.74055136903724,2.10837217149998,6.18813259489121,10.2131881726136,7.56256594931503,9.31382523235832,6.00143698088458,6.20690817747958,6.59964625127661,7.40470592709544,7.30715877875038,6.57080782578389,6.35496212591461,5.73373834942901,8.244312647074,8.55761461488299,4.644095219468,4.65552141612232,5.58079059133208,5.24665505933731,11.4963687246516,5.29699730473343,5.77883230297023,2.77791791054568,3.39063222608444,4.23752105935178,4.80434163733698,1.35982743995084,1.11961161858926,1.52019971184866,8.59203556213602,7.43389584915668,5.69294507955176,3.67218158794124,4.39085421630384,7.20596460362386,4.18079473792944,10.579642332843,4.71160695571253,5.57344385154709,8.69875038321696,2.25477175473676,5.38259565758324,6.6183396182839,6.41688921535357,6.45799117388655,5.06868376472335,9.27122185301456,10.0257376329842,7.44501345422547,2.65742532908607,4.89651010638371,4.4241556887945,3.44632865993279,3.08132871494482,3.24802057444488,5.37080087002444,2.98022032171897,3.72605893511903,2.80610101631697,2.92802704849628,3.50551310612999,2.31900225814733,3.21611006441183,2.98256709085021,3.74006086981021,10.6563280299149,2.44184548711471,1.25599399253266,1.17519231454855,11.3981860478992,7.88266396894964,8.05867146775966,7.5028932677673,10.0314420807073,11.2950368523413,10.5874804396651,10.3121192419091,7.90524638780963,6.16574267793578,3.0215755895588,8.77529250301348,9.00642406448441,7.70342095273148,14.497288729051,5.60451676954554,7.18244772121856,5.29274177837816,5.59145449257076,4.82110274044359,6.06683577885047,5.33392146723877,4.73880631649457,6.4183841918363,5.30664144703975,6.08350319736575,6.03604292435444,4.30750934361459,5.18603734479441,5.34149861287203,5.23923060411381,7.06894388263618,6.55891349576597,4.53294490883637,6.47675248591348,4.4573002810104,5.85670160325814,4.05341522910446,6.83128158171944,4.23492211868988,4.23073039458383,4.93905526756486,3.6829759601298,5.16055632614275,5.61142271657738,5.57584585183618,5.71325997778268,4.09231043169689,3.87342102964915,5.40138510747196,9.49280196164194,7.01794825336225,6.66100267549725,10.3295699317175,11.0295709559758,7.88350641109433
|short_description=p2@Brd2
}}
}}

Revision as of 01:48, 18 April 2012

Short description:p2@Brd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Brd2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000114241, ENSMUST00000154232, uc008cbh.1, uc008cbk.1_5end
EntrezGene:Brd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Brd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.36
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.21
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.75
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.08
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.23
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C39.10
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C87.79
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.90
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.88
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D92.27
Mouse Schwann, donor2.CNhs12573.11746-123F94.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.88
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D78.31
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F54.07
adrenal gland, neonate N00.CNhs11191.1311-23C19.88
adrenal gland, neonate N25.CNhs11223.1377-27I38.80
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H113.30
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F58.41
bone (os femoris), neonate N16.CNhs11225.1525-43A69.28
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B222.25
cerebellum, neonate N30.CNhs11135.1395-42I222.41
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A49.14
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F15.15
cortex, adult.CNhs10473.12-14D59.91
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B211.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.35
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.97
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G48.21
eyeball, embryo E12.CNhs11016.345-16C65.86
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C94.14
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C68.91
eyeball, neonate N01.CNhs11140.1532-43E76.28
eyeball, neonate N02.CNhs11205.1551-44G86.75
eyeball, neonate N16.CNhs11188.777-19A211.12
forelimb, embryo E11.CNhs10596.335-25E26.68
forelimb, embryo E12.CNhs10600.359-14H25.86
forelimb, embryo E13.CNhs10589.384-1E27.74
forelimb, embryo E14.CNhs10577.413-26A88.11
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C65.25
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E37.01
heart, neonate N03.CNhs11221.1349-25I28.23
heart, neonate N10.CNhs11118.749-24G16.73
heart, neonate N16.CNhs11209.782-15G17.38
heart, neonate N20.CNhs11127.821-26I65.99
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D28.05
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G19.98
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I55.33
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D83.87
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E94.61
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G13.78
kidney, embryo E14.CNhs10606.411-4I96.26
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I25.70
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G710.24
kidney, neonate N10.CNhs11206.758-6D55.94
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F34.40
kidney, neonate N30.CNhs11203.1385-42H17.28
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B111.64
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F85.38
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B67.28
lung, embryo E17.CNhs10605.480-44A68.04
lung, embryo E18.CNhs10583.1287-20I613.33
lung, neonate N00.CNhs11224.640-42C617.56
lung, neonate N06.CNhs11212.683-20E512.45
lung, neonate N07.CNhs11111.715-19A313.29
lung, neonate N10.CNhs11219.750-23E615.31
lung, neonate N20.CNhs11109.822-18A411.63
lung, neonate N25.CNhs11119.1359-25C76.56
lung, neonate N30.CNhs11133.1394-42H210.56
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H26.90
medulla oblongata, adult.CNhs10477.17-12C27.39
medulla oblongata, neonate N30.CNhs11200.1396-42A39.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.56
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I711.64
ovary, embryo E18.CNhs11040.505-44H79.26
ovary, neonate N00.CNhs11217.1299-22I413.03
oviduct, adult pregnant day01.CNhs10500.988-6G611.71
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E67.56
pituitary gland, embryo E13.CNhs11009.370-44C79.31
pituitary gland, embryo E14.CNhs11037.398-44A56.00
pituitary gland, embryo E15.CNhs10592.427-16B96.21
pituitary gland, embryo E16.CNhs11036.449-43F66.60
pituitary gland, embryo E17.CNhs11039.1265-44F57.40
pituitary gland, neonate N00.CNhs11190.1308-22E97.31
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G36.35
prostate, adult.CNhs10470.859-1F85.73
skin, adult.CNhs10492.30-1C38.24
skin, neonate N00.CNhs11124.650-25G48.56
skin, neonate N03.CNhs11215.662-22H34.64
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C45.58
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C911.50
spleen, adult.CNhs10465.25-2G25.30
spleen, embryo E16.CNhs11035.461-43C15.78
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H14.24
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E37.43
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D43.67
stomach, embryo E17.CNhs11006.1035-18D54.39
stomach, embryo E18.CNhs10999.1286-20C67.21
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A910.58
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I15.57
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F55.38
testis, embryo E15.CNhs11034.443-27C56.62
testis, embryo E16.CNhs11033.470-26G56.42
testis, embryo E17.CNhs11029.486-18I56.46
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B79.27
testis, neonate N07.CNhs11222.726-26I410.03
testis, neonate N10.CNhs11204.763-44D97.45
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C53.25
thymus, embryo E17.CNhs10581.478-18C15.37
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F83.73
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D33.51
thymus, neonate N10.CNhs11194.748-24E42.32
thymus, neonate N20.CNhs11186.820-7A23.22
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G23.74
tongue, adult.CNhs10499.32-1B410.66
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E411.40
uterus, adult pregnant day19.CNhs10497.590-15F57.88
uterus, adult.CNhs10509.92-27E58.06
vagina, adult.CNhs10502.89-27D57.50
vesicular gland, adult.CNhs10491.51-27F810.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I85.60
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.07
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.56
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.83
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I59.49
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C610.33
whole body, neonate N06.CNhs10515.692-21D111.03
whole body, neonate N10.CNhs10518.761-6B47.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:34257323..34257367,-&oldid=800356"