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FFCP PHASE1:Mm9::chr18:68460005..68460063,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr18:68460005..68460063,+
|short_description=p1@Rnmt
|description=CAGE_peak_1_at_Rnmt_5end
|association_with_transcript=0bp_to_ENSMUST00000009679,ENSMUST00000025427,ENSMUST00000131075,ENSMUST00000151833,NM_001170953,NM_026440,uc008fnj.2,uc008fnk.2,uc012bem.1_5end
|EntrezGene=67897
|EntrezGene=67897
|HGNC=
|HGNC=
|UniProt=Q9D0L8,D3Z478
|UniProt=Q9D0L8,D3Z478
|association_with_transcript=0bp_to_ENSMUST00000009679,ENSMUST00000025427,ENSMUST00000131075,ENSMUST00000151833,NM_001170953,NM_026440,uc008fnj.2,uc008fnk.2,uc012bem.1_5end
|description=CAGE_peak_1_at_Rnmt_5end
|id=chr18:68460005..68460063,+
|ontology_enrichment_disease=
|phase1_expression=24.3426247599287,5.93258192986914,9.55498402718026,8.77146212789807,12.5223932486587,11.0800319461847,16.8201101228778,33.9594340651346,30.2695752626083,20.8317428426574,71.0554568135846,52.8091692549127,33.7265437964475,33.919116138571,24.650122374359,37.4579244671178,49.6688933470984,33.5967206106523,30.1651753932625,27.1609377150739,18.5394372529332,40.8085809435639,45.1875635210358,20.7990149631429,23.1703373877842,7.46501553349526,12.9228598847722,12.2818602630957,17.4821545899864,11.3413558391969,15.5211357458713,12.7006134691926,17.8368788399525,0,14.1537293678125,12.9663023379624,16.5377178572519,18.8339233831608,13.2827008569046,19.8939022710043,23.5292595212406,12.9778642142105,17.9638830621527,12.4637849795822,16.6258167200004,16.8863011988747,1.56478268869608,2.18025156380447,4.39372365468944,5.44403717407994,7.55926676776958,4.31257693094915,29.0263908479884,27.5637613964311,29.5762543245368,13.8920095459411,10.8882707176728,11.8604581223812,12.5436205732951,13.7537654610729,10.1413024560989,2.37191172448392,2.66788438833342,2.6996991518442,0.988866362566974,2.8419204597844,2.09720077362883,1.53687322128622,24.2633692801838,17.9557897981149,17.2466468308133,4.85606673486466,8.1721360152097,21.435889862617,16.9646483702278,10.1114066527102,24.2254938198655,34.6032686210859,35.1758961156798,12.3973110466382,16.742238779241,25.0038417867245,18.4260779340911,24.7615548413939,27.0452898564954,13.8475435172624,25.6269025438385,20.3175395949578,26.0498105066153,17.8348881852014,19.1310562543107,11.185510400758,14.2793980078628,7.55584468292944,6.49776417447669,11.2006721774334,17.4151080963372,13.4639954836666,16.1067322853779,12.0135455333516,19.4363919291819,16.6824420638613,7.64415719119937,7.11066703153331,18.4017384859532,19.2553497761075,15.6712577954583,17.2417658375781,28.7421050848361,18.8521516612327,19.6038419245734,18.2679286987285,18.6798552777407,25.3214036128406,29.867531612469,14.325991411583,21.2587672251562,20.2439099687876,16.8076004870476,21.5149910430054,19.2132121060542,26.6681389224372,11.1835056730873,36.5975996264434,35.8153868651008,12.517395705221,29.3547055039505,37.1939693215913,30.7509949516817,39.9941007210877,36.6000482254901,41.8428992535839,36.3292829201858,40.6587577155226,38.4407882435186,37.6399730317198,22.3028206832193,23.8861383571379,22.492325500597,19.5710925974421,25.3734863777272,28.9676651586176,30.0703756774933,29.086029842293,27.8269281528931,34.2063633160549,28.9538328889562,24.3181168494675,17.8921434134259,24.3946843416487,20.586281527182,19.5084201860542,24.7462051810782,21.5916343243743,21.6071243228341,18.3111525473014,45.6438571753603,36.8007507174043,27.8480229407681,21.5410803436922,24.1561841780529,21.0672611909387,19.6498130535725,19.6764231747404,18.9748548851475,13.9520366850245,15.5598572811779,21.7183536802935,14.4812667923863,14.9392392311977,16.6191059569004,15.3509986796599,14.2707574939183,16.7758023450465,33.4361018216962,40.8531311145759,8.92130714056255,10.0491215332147,24.5281488115519,20.9013004674395,20.3610588888907,21.3784536100743,20.9035361214178,15.5985013412299,14.2358718463353,20.5873693405014,22.8715040008245,21.089386036362,21.4460495831032,8.08937467788799,12.9682829924817,18.1218558661474,16.8804431848243,23.192448059775,25.9227792048085,21.9943434072939,21.9166310499417,22.4434623649019,15.5561881325673,13.2849133181642,13.9728867778824,14.5608653427725,14.2297261001831,28.0299777603038,26.7320233353956,30.3563851719553,28.6032771157789,16.8824011826692,22.6617008085464,21.8649064462616,22.86106697528,13.453509246216,20.1275489138296,14.8856379067401,8.42501717409313,9.59799736199025,10.225652570749,14.9557491622644,17.1820466854942,23.1179522359991,25.096606372072,19.1811946925963,19.4792906079457,20.6032696653433,16.4250112211349,13.4642217021881,17.8127712839996,17.9386398615508,19.9318460821859,15.8947415274266,13.1240586218081,12.5844680965915,27.142431109069,17.4049818821987,9.83528546038072,19.0396354950265,37.5688380571433,44.5404409050372,14.0984053023941,25.752034574846,12.9358369960665,21.8645696806118,19.3881057959519,23.4189421993501,23.8394581268162,20.3815102167959,22.6693992937941,21.0424217696145,20.5549644532192,34.0600595407115,22.5684735481147,10.6839362200353,22.8041743095006,18.806594018869,18.5843193675948,16.9946445308487,13.9068836203785,17.3516673375426,8.56375489354241,15.9866276930842,22.4832615056352,17.0860852854428,19.6073558111597,18.0140952023415,18.9753495434998,11.3449097573006,26.5542892487955,20.3469036255381,10.3486947026204,18.2186479776853,18.9754049997233,16.7666688545946,20.8977256164694,12.7875278628132,20.6511103096065,20.5477108737906,24.6991805821557,21.4352128823924,31.4855632057016,22.6173468480584,24.7100752086493,21.8307396660931,14.8655226681224,48.766854428764,22.7258271461144,18.7812049846532,29.0755407970447,32.9644799758209,29.7993416431835,24.936820879511,30.7660958288878,28.5500962740262,33.4443936606706,11.4560474161814,23.408863525004,21.1452245811923,16.848833168201,15.2634456090562,15.940467153471,16.3185859125633,17.3572257023205,14.1348208671376,20.3495508068115,14.2908042009993,9.58277995763124,25.8663624656083,19.6895603643946,14.3893879374595,18.3406949338378,19.9368228079118,24.4103056383168,19.7910664962804,33.345271527376,21.5009867535145,23.9064905194028,26.8609452533952,15.2043911467623,22.596410576262,27.6731352942703,26.8540043501222,24.8351693476581,27.4045624905529,29.0948368533917,38.1653180803998,35.0551310612999,29.8445508005048,26.8983750841717,27.3241630258536,27.8167027192134,14.964205318604,43.5092468613167,42.7935096027199,42.81057717284,16.0347363046718,15.5776454624481,20.696133542201,20.5793643915903,15.5487352250963,33.885110557024,36.8260189205741,33.227939779485,29.3868941807706,26.0331357512844,35.5035131773159,33.0761025113585,40.9792294934041,33.5325382648311,31.583379016861,25.4279001581233,33.5180893656866,27.8295777379239,25.2830985751026,18.2363451486345,11.2144540154509,17.7797382241292,19.3672953804561,18.9342333659171,18.9522908822848,16.4761544928656,16.7877443833608,21.0693391807235,18.9514451118413,20.4470269481983,18.0991602687568,17.0349959138938,19.8696497077616,17.7196937345422,25.3182142631163,17.1434626192708,18.4574838405711,17.1674056762071,17.8776092457764,22.209813778018,19.0382867756272,19.9391490431322,17.3626009548976,20.2348129630334,16.2731258780744,16.8461725736327,20.3904278517416,22.5077073743329,20.2967261953615,15.4325288784913,18.9856039232839,16.3752125911786,25.9993975398441,24.8674831689496,14.117850823649,19.7087660277358
|phase1_expression=24.3426247599287,5.93258192986914,9.55498402718026,8.77146212789807,12.5223932486587,11.0800319461847,16.8201101228778,33.9594340651346,30.2695752626083,20.8317428426574,71.0554568135846,52.8091692549127,33.7265437964475,33.919116138571,24.650122374359,37.4579244671178,49.6688933470984,33.5967206106523,30.1651753932625,27.1609377150739,18.5394372529332,40.8085809435639,45.1875635210358,20.7990149631429,23.1703373877842,7.46501553349526,12.9228598847722,12.2818602630957,17.4821545899864,11.3413558391969,15.5211357458713,12.7006134691926,17.8368788399525,0,14.1537293678125,12.9663023379624,16.5377178572519,18.8339233831608,13.2827008569046,19.8939022710043,23.5292595212406,12.9778642142105,17.9638830621527,12.4637849795822,16.6258167200004,16.8863011988747,1.56478268869608,2.18025156380447,4.39372365468944,5.44403717407994,7.55926676776958,4.31257693094915,29.0263908479884,27.5637613964311,29.5762543245368,13.8920095459411,10.8882707176728,11.8604581223812,12.5436205732951,13.7537654610729,10.1413024560989,2.37191172448392,2.66788438833342,2.6996991518442,0.988866362566974,2.8419204597844,2.09720077362883,1.53687322128622,24.2633692801838,17.9557897981149,17.2466468308133,4.85606673486466,8.1721360152097,21.435889862617,16.9646483702278,10.1114066527102,24.2254938198655,34.6032686210859,35.1758961156798,12.3973110466382,16.742238779241,25.0038417867245,18.4260779340911,24.7615548413939,27.0452898564954,13.8475435172624,25.6269025438385,20.3175395949578,26.0498105066153,17.8348881852014,19.1310562543107,11.185510400758,14.2793980078628,7.55584468292944,6.49776417447669,11.2006721774334,17.4151080963372,13.4639954836666,16.1067322853779,12.0135455333516,19.4363919291819,16.6824420638613,7.64415719119937,7.11066703153331,18.4017384859532,19.2553497761075,15.6712577954583,17.2417658375781,28.7421050848361,18.8521516612327,19.6038419245734,18.2679286987285,18.6798552777407,25.3214036128406,29.867531612469,14.325991411583,21.2587672251562,20.2439099687876,16.8076004870476,21.5149910430054,19.2132121060542,26.6681389224372,11.1835056730873,36.5975996264434,35.8153868651008,12.517395705221,29.3547055039505,37.1939693215913,30.7509949516817,39.9941007210877,36.6000482254901,41.8428992535839,36.3292829201858,40.6587577155226,38.4407882435186,37.6399730317198,22.3028206832193,23.8861383571379,22.492325500597,19.5710925974421,25.3734863777272,28.9676651586176,30.0703756774933,29.086029842293,27.8269281528931,34.2063633160549,28.9538328889562,24.3181168494675,17.8921434134259,24.3946843416487,20.586281527182,19.5084201860542,24.7462051810782,21.5916343243743,21.6071243228341,18.3111525473014,45.6438571753603,36.8007507174043,27.8480229407681,21.5410803436922,24.1561841780529,21.0672611909387,19.6498130535725,19.6764231747404,18.9748548851475,13.9520366850245,15.5598572811779,21.7183536802935,14.4812667923863,14.9392392311977,16.6191059569004,15.3509986796599,14.2707574939183,16.7758023450465,33.4361018216962,40.8531311145759,8.92130714056255,10.0491215332147,24.5281488115519,20.9013004674395,20.3610588888907,21.3784536100743,20.9035361214178,15.5985013412299,14.2358718463353,20.5873693405014,22.8715040008245,21.089386036362,21.4460495831032,8.08937467788799,12.9682829924817,18.1218558661474,16.8804431848243,23.192448059775,25.9227792048085,21.9943434072939,21.9166310499417,22.4434623649019,15.5561881325673,13.2849133181642,13.9728867778824,14.5608653427725,14.2297261001831,28.0299777603038,26.7320233353956,30.3563851719553,28.6032771157789,16.8824011826692,22.6617008085464,21.8649064462616,22.86106697528,13.453509246216,20.1275489138296,14.8856379067401,8.42501717409313,9.59799736199025,10.225652570749,14.9557491622644,17.1820466854942,23.1179522359991,25.096606372072,19.1811946925963,19.4792906079457,20.6032696653433,16.4250112211349,13.4642217021881,17.8127712839996,17.9386398615508,19.9318460821859,15.8947415274266,13.1240586218081,12.5844680965915,27.142431109069,17.4049818821987,9.83528546038072,19.0396354950265,37.5688380571433,44.5404409050372,14.0984053023941,25.752034574846,12.9358369960665,21.8645696806118,19.3881057959519,23.4189421993501,23.8394581268162,20.3815102167959,22.6693992937941,21.0424217696145,20.5549644532192,34.0600595407115,22.5684735481147,10.6839362200353,22.8041743095006,18.806594018869,18.5843193675948,16.9946445308487,13.9068836203785,17.3516673375426,8.56375489354241,15.9866276930842,22.4832615056352,17.0860852854428,19.6073558111597,18.0140952023415,18.9753495434998,11.3449097573006,26.5542892487955,20.3469036255381,10.3486947026204,18.2186479776853,18.9754049997233,16.7666688545946,20.8977256164694,12.7875278628132,20.6511103096065,20.5477108737906,24.6991805821557,21.4352128823924,31.4855632057016,22.6173468480584,24.7100752086493,21.8307396660931,14.8655226681224,48.766854428764,22.7258271461144,18.7812049846532,29.0755407970447,32.9644799758209,29.7993416431835,24.936820879511,30.7660958288878,28.5500962740262,33.4443936606706,11.4560474161814,23.408863525004,21.1452245811923,16.848833168201,15.2634456090562,15.940467153471,16.3185859125633,17.3572257023205,14.1348208671376,20.3495508068115,14.2908042009993,9.58277995763124,25.8663624656083,19.6895603643946,14.3893879374595,18.3406949338378,19.9368228079118,24.4103056383168,19.7910664962804,33.345271527376,21.5009867535145,23.9064905194028,26.8609452533952,15.2043911467623,22.596410576262,27.6731352942703,26.8540043501222,24.8351693476581,27.4045624905529,29.0948368533917,38.1653180803998,35.0551310612999,29.8445508005048,26.8983750841717,27.3241630258536,27.8167027192134,14.964205318604,43.5092468613167,42.7935096027199,42.81057717284,16.0347363046718,15.5776454624481,20.696133542201,20.5793643915903,15.5487352250963,33.885110557024,36.8260189205741,33.227939779485,29.3868941807706,26.0331357512844,35.5035131773159,33.0761025113585,40.9792294934041,33.5325382648311,31.583379016861,25.4279001581233,33.5180893656866,27.8295777379239,25.2830985751026,18.2363451486345,11.2144540154509,17.7797382241292,19.3672953804561,18.9342333659171,18.9522908822848,16.4761544928656,16.7877443833608,21.0693391807235,18.9514451118413,20.4470269481983,18.0991602687568,17.0349959138938,19.8696497077616,17.7196937345422,25.3182142631163,17.1434626192708,18.4574838405711,17.1674056762071,17.8776092457764,22.209813778018,19.0382867756272,19.9391490431322,17.3626009548976,20.2348129630334,16.2731258780744,16.8461725736327,20.3904278517416,22.5077073743329,20.2967261953615,15.4325288784913,18.9856039232839,16.3752125911786,25.9993975398441,24.8674831689496,14.117850823649,19.7087660277358
|short_description=p1@Rnmt
}}
}}

Revision as of 03:48, 18 April 2012

Short description:p1@Rnmt
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rnmt_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000009679, ENSMUST00000025427, ENSMUST00000131075, ENSMUST00000151833, NM_001170953, NM_026440, uc008fnj.2, uc008fnk.2, uc012bem.1_5end
EntrezGene:Rnmt
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rnmt

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.34
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I38.77
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I816.82
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E933.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E730.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.83
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E671.06
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F152.81
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E433.73
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E833.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A124.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A337.46
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A549.67
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A233.60
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A430.17
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A627.16
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H240.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I945.19
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D120.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D223.17
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I112.92
GP2+ M cell, pool3.CNhs13240.11847-124I212.28
Ileum epithelium, pool1.CNhs13199.10252-104B917.48
Ileum epithelium, pool2.CNhs13232.10253-104C111.34
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.15
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G818.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H113.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H319.89
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G923.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H417.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.63
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A229.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I927.56
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A129.58
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.86
Mouse Granule cells, donor1.CNhs12131.11713-123C312.54
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.26
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.96
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D221.44
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F216.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F334.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.18
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E524.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I627.05
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F625.63
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.32
Mouse Schwann, donor1.CNhs12507.11728-123D926.05
Mouse Schwann, donor2.CNhs12573.11746-123F917.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G319.13
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.44
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G118.40
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.26
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.67
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.24
accessory axillary lymph node, adult.CNhs10475.1063-29H928.74
adrenal gland, adult.CNhs10508.49-24D718.85
adrenal gland, embryo E14.CNhs11038.406-44C519.60
adrenal gland, embryo E16.CNhs11004.1254-43D618.27
adrenal gland, embryo E17.CNhs11043.1263-45I118.68
adrenal gland, embryo E18.CNhs11026.1262-18F525.32
adrenal gland, neonate N00.CNhs11191.1311-23C129.87
adrenal gland, neonate N25.CNhs11223.1377-27I314.33
amnion, adult pregnant day17.5.CNhs10488.583-22A821.26
aorta, adult.CNhs10498.46-23H120.24
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F521.51
bone (os femoris), neonate N16.CNhs11225.1525-43A619.21
bone (os femoris), neonate N20.CNhs11195.1350-25C326.67
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B236.60
cerebellum, neonate N30.CNhs11135.1395-42I235.82
colon, adult.CNhs10468.36-18H712.52
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C729.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D137.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D430.75
corpora quadrigemina, adult.CNhs10501.16-22A439.99
corpus striatum, adult.CNhs10487.19-21D836.60
corpus striatum, neonate N00.CNhs11226.630-43F141.84
cortex, adult.CNhs10473.12-14D536.33
cortex, neonate N30.CNhs11107.1392-42F240.66
diencephalon, adult.CNhs10482.20-12F238.44
diencephalon, neonate N30.CNhs11201.1388-42B237.64
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A223.89
epididymis, adult.CNhs10490.58-23B222.49
eyeball, adult.CNhs10484.31-12G419.57
eyeball, embryo E12.CNhs11016.345-16C625.37
eyeball, embryo E14.CNhs10521.399-16E228.97
eyeball, embryo E15.CNhs10593.426-16C930.07
eyeball, embryo E17.CNhs11023.1261-18D429.09
eyeball, neonate N00.CNhs11207.633-15C627.83
eyeball, neonate N01.CNhs11140.1532-43E734.21
eyeball, neonate N02.CNhs11205.1551-44G828.95
eyeball, neonate N16.CNhs11188.777-19A224.32
forelimb, embryo E11.CNhs10596.335-25E217.89
forelimb, embryo E12.CNhs10600.359-14H224.39
forelimb, embryo E13.CNhs10589.384-1E220.59
forelimb, embryo E14.CNhs10577.413-26A819.51
forelimb, embryo E15.CNhs11007.437-20E724.75
forelimb, embryo E17.CNhs10598.1517-43C421.59
forelimb, embryo E18.CNhs11008.1520-43B521.61
gonad, embryo E13.CNhs11044.1564-45I618.31
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C845.64
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D236.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D527.85
heart, embryo E11.CNhs10586.331-24E921.54
heart, embryo E12.CNhs11015.353-12F524.16
heart, embryo E13.CNhs11013.376-3I921.07
heart, embryo E14.CNhs10597.403-26D419.65
heart, embryo E15.CNhs11017.431-16C819.68
heart, embryo E16.CNhs11021.457-17C618.97
heart, embryo E17.CNhs11025.479-18E513.95
heart, embryo E18.CNhs11030.1283-20G315.56
heart, neonate N00.CNhs11213.639-21E321.72
heart, neonate N03.CNhs11221.1349-25I214.48
heart, neonate N10.CNhs11118.749-24G114.94
heart, neonate N16.CNhs11209.782-15G116.62
heart, neonate N20.CNhs11127.821-26I615.35
heart, neonate N25.CNhs11196.1351-25D314.27
heart, neonate N30.CNhs11202.1390-42D216.78
hippocampus, adult.CNhs10478.13-16E833.44
hippocampus, neonate N00.CNhs11228.627-43G140.85
intestinal mucosa, adult.CNhs10506.860-29I38.92
intestine, adult.CNhs10496.178-9A310.05
intestine, embryo E12.CNhs11019.1251-16I524.53
intestine, embryo E13.CNhs11010.381-16D520.90
intestine, embryo E15.CNhs10602.976-16D820.36
intestine, embryo E16.CNhs10585.463-22H421.38
intestine, embryo E17.CNhs10582.482-18D320.90
intestine, embryo E18.CNhs10526.1289-20F715.60
intestine, neonate N00.CNhs11126.644-26D114.24
intestine, neonate N01.CNhs11192.1322-23E920.59
intestine, neonate N06.CNhs11102.688-20B822.87
intestine, neonate N07.CNhs11095.720-20F221.09
intestine, neonate N10.CNhs11098.755-23A521.45
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E312.97
intestine, neonate N30.CNhs11131.1384-42G118.12
kidney, embryo E14.CNhs10606.411-4I916.88
kidney, embryo E15.CNhs10997.434-16F823.19
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I221.99
kidney, embryo E18.CNhs11001.1288-20C721.92
kidney, neonate N00.CNhs11214.646-21G722.44
kidney, neonate N10.CNhs11206.758-6D515.56
kidney, neonate N20.CNhs11113.832-19I113.28
kidney, neonate N25.CNhs11122.1353-25F313.97
kidney, neonate N30.CNhs11203.1385-42H114.56
liver, adult pregnant day01.CNhs10466.508-5B214.23
liver, embryo E12.CNhs10601.355-15F828.03
liver, embryo E13.CNhs10524.378-3H626.73
liver, embryo E14.CNhs10594.409-16E130.36
liver, embryo E15.CNhs10520.433-16D728.60
liver, embryo E16.CNhs10523.462-17F516.88
liver, embryo E17.CNhs10510.481-18A322.66
liver, embryo E18.CNhs10579.499-43G421.86
liver, neonate N00.CNhs11117.641-24F422.86
liver, neonate N03.CNhs11123.1345-25G213.45
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H214.89
liver, neonate N10.CNhs11115.751-24B98.43
liver, neonate N20.CNhs11220.823-25A39.60
liver, neonate N25.CNhs11198.1368-26H110.23
liver, neonate N30.CNhs11106.1382-42D114.96
lung, adult.CNhs10474.28-22B117.18
lung, embryo E12.CNhs10522.354-16G223.12
lung, embryo E14.CNhs10604.404-26F825.10
lung, embryo E15.CNhs11020.432-17C519.18
lung, embryo E16.CNhs10998.458-17B619.48
lung, embryo E17.CNhs10605.480-44A620.60
lung, embryo E18.CNhs10583.1287-20I616.43
lung, neonate N00.CNhs11224.640-42C613.46
lung, neonate N06.CNhs11212.683-20E517.81
lung, neonate N07.CNhs11111.715-19A317.94
lung, neonate N10.CNhs11219.750-23E619.93
lung, neonate N20.CNhs11109.822-18A415.89
lung, neonate N25.CNhs11119.1359-25C713.12
lung, neonate N30.CNhs11133.1394-42H212.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A127.14
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.40
mammary gland, adult lactating day02.CNhs10480.595-22B69.84
mammary gland, adult pregnant day19.CNhs10476.588-5H219.04
medulla oblongata, adult.CNhs10477.17-12C237.57
medulla oblongata, neonate N30.CNhs11200.1396-42A344.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.10
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C225.75
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.42
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D823.84
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D422.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.04
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.55
olfactory brain, adult.CNhs10489.18-22I934.06
ovary, adult.CNhs10507.91-2I722.57
ovary, embryo E18.CNhs11040.505-44H710.68
ovary, neonate N00.CNhs11217.1299-22I422.80
oviduct, adult pregnant day01.CNhs10500.988-6G618.81
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F416.99
pancreas, embryo E15.CNhs11042.1556-45F213.91
pancreas, embryo E16.CNhs11003.460-26E517.35
pancreas, embryo E17.CNhs10599.1558-45G38.56
pancreas, embryo E18.CNhs10580.1535-43I715.99
pancreas, neonate N00.CNhs11105.645-26G922.48
pancreas, neonate N01.CNhs11138.1531-43D717.09
pancreas, neonate N02.CNhs11139.1539-43D819.61
pancreas, neonate N16.CNhs11136.787-43B618.01
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G826.55
pituitary gland, embryo E12.CNhs11018.346-16E620.35
pituitary gland, embryo E13.CNhs11009.370-44C710.35
pituitary gland, embryo E14.CNhs11037.398-44A518.22
pituitary gland, embryo E15.CNhs10592.427-16B918.98
pituitary gland, embryo E16.CNhs11036.449-43F616.77
pituitary gland, embryo E17.CNhs11039.1265-44F520.90
pituitary gland, neonate N00.CNhs11190.1308-22E912.79
placenta, adult pregnant day10.CNhs10472.539-13I720.65
placenta, adult pregnant day17.CNhs10464.577-18G320.55
prostate, adult.CNhs10470.859-1F824.70
skin, adult.CNhs10492.30-1C321.44
skin, neonate N00.CNhs11124.650-25G431.49
skin, neonate N03.CNhs11215.662-22H322.62
skin, neonate N06.CNhs11097.693-20I524.71
skin, neonate N10.CNhs11108.762-6C421.83
small intestine, neonate N16.CNhs11114.790-21I114.87
spinal cord, adult.CNhs10505.24-13C948.77
spleen, adult.CNhs10465.25-2G222.73
spleen, embryo E16.CNhs11035.461-43C118.78
spleen, embryo E18.CNhs11011.1271-21F229.08
spleen, neonate N10.CNhs11116.752-24D132.96
spleen, neonate N20.CNhs11112.824-19H129.80
spleen, neonate N25.CNhs11099.1354-25G324.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.77
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C928.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D333.44
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E323.41
stomach, embryo E15.CNhs10603.1252-16G821.15
stomach, embryo E16.CNhs11022.459-17D416.85
stomach, embryo E17.CNhs11006.1035-18D515.26
stomach, embryo E18.CNhs10999.1286-20C615.94
stomach, neonate N03.CNhs11193.1340-24B816.32
stomach, neonate N07.CNhs11210.718-18A917.36
stomach, neonate N25.CNhs11104.1355-25E414.13
stomach, neonate N30.CNhs11134.1386-42I120.35
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F525.87
testis, embryo E15.CNhs11034.443-27C519.69
testis, embryo E16.CNhs11033.470-26G514.39
testis, embryo E17.CNhs11029.486-18I518.34
testis, embryo E18.CNhs11027.503-18G519.94
testis, neonate N00.CNhs11189.1300-22B724.41
testis, neonate N07.CNhs11222.726-26I419.79
testis, neonate N10.CNhs11204.763-44D933.35
testis, neonate N20.CNhs11110.839-18H321.50
testis, neonate N30.CNhs11130.1391-42E223.91
thymus, adult.CNhs10471.38-12B526.86
thymus, embryo E14.CNhs11041.402-44I415.20
thymus, embryo E15.CNhs11005.430-45I222.60
thymus, embryo E16.CNhs11002.456-26C527.67
thymus, embryo E17.CNhs10581.478-18C126.85
thymus, embryo E18.CNhs10595.1273-19G424.84
thymus, neonate N02.CNhs11181.1541-43F827.40
thymus, neonate N03.CNhs11137.2104-43C729.09
thymus, neonate N06.CNhs11197.681-26C438.17
thymus, neonate N07.CNhs11211.713-19D335.06
thymus, neonate N10.CNhs11194.748-24E429.84
thymus, neonate N20.CNhs11186.820-7A226.90
thymus, neonate N25.CNhs11125.1362-25G727.32
thymus, neonate N30.CNhs11132.1393-42G227.82
tongue, adult.CNhs10499.32-1B414.96
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H343.51
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F742.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G542.81
urinary bladder, adult.CNhs10481.879-12E416.03
uterus, adult pregnant day19.CNhs10497.590-15F515.58
uterus, adult.CNhs10509.92-27E520.70
vagina, adult.CNhs10502.89-27D520.58
vesicular gland, adult.CNhs10491.51-27F815.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A133.89
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A236.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A333.23
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D729.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A535.50
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A740.98
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.58
whole body, embryo E11.CNhs11014.324-5I825.43
whole body, embryo E12.CNhs10587.857-27C933.52
whole body, embryo E13.CNhs10512.372-23H227.83
whole body, embryo E14.5.CNhs10578.420-27D225.28
whole body, embryo E14.CNhs10519.395-14B118.24
whole body, embryo E16.CNhs10514.453-14F211.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.95
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.07
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.03
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.72
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G525.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.46
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G519.04
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.51
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.30
whole body, embryo E17.5.CNhs10513.490-9F915.43
whole body, embryo E17.CNhs10517.475-3I518.99
whole body, embryo E18.CNhs10516.493-3B316.38
whole body, neonate N00.CNhs10525.657-19C226.00
whole body, neonate N01.CNhs10576.659-23C624.87
whole body, neonate N06.CNhs10515.692-21D114.12
whole body, neonate N10.CNhs10518.761-6B419.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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