Personal tools

FFCP PHASE1:Mm9::chr17:56148622..56148666,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Mpnd_5end
|description=CAGE_peak_1_at_Mpnd_5end
|id=chr17:56148622..56148666,+
|id=chr17:56148622..56148666,+
|ontology_enrichment_celltype=CL:0002321!2.55e-22!70;CL:0000220!2.55e-22!70;CL:0002319!1.64e-18!43;CL:0000221!3.35e-18!44;CL:0000133!3.35e-18!44;CL:0000055!5.32e-17!50;CL:0000540!6.18e-15!33;CL:0000047!6.18e-15!33;CL:0000031!6.18e-15!33;CL:0000404!6.18e-15!33;CL:0000548!1.10e-14!115;CL:0000004!1.10e-14!115;CL:0000255!1.10e-14!115;CL:0002371!3.01e-14!118;CL:0000117!3.21e-14!23;CL:0000337!3.21e-14!23;CL:0000393!6.84e-13!39;CL:0000211!6.84e-13!39;CL:0000144!1.23e-12!121;CL:0000012!1.23e-12!121;CL:0000723!8.36e-09!91;CL:0000048!8.36e-09!91;CL:0000066!7.16e-07!25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=20.4990524294136,37.3403686174116,34.1249429542152,128.547289805403,118.211392267338,22.831580980017,33.8738328863512,17.4316486646128,5.77233760821834,8.19225842126977,7.70480857014772,6.30200056063158,20.5440875917447,20.3689537636264,7.99463428357591,6.07425802169478,2.79824751251259,20.0318475002481,19.8815928728321,21.2194825899015,11.4808441703944,16.8794617041505,32.6499736423669,25.9187724925319,25.2350209173887,38.4735415957064,31.8763877157715,22.1935369666466,27.1733489822615,24.1948924569534,21.7295900442199,12.7006134691926,6.1506478758457,15.8481681015439,20.7973166220918,20.94556531517,22.662798545123,23.4377713212668,15.626706890476,12.0410461113974,18.2351761289614,17.7591826089196,19.9059244742773,12.4637849795822,12.6721164024393,18.1711284640065,39.90195856175,65.8435972268948,36.6875925166568,41.6079984018967,32.3368633954587,63.2511283205875,20.6372605451016,32.6412963905105,27.8957853288245,18.2654199585522,28.3668105539369,20.1112115988203,47.1397353802863,59.2469896784677,60.213983333087,24.3968063089775,29.3467282716676,36.8958884085374,41.5323872278129,41.2078466668738,51.830819119684,85.6806820867067,51.5337373173134,66.0179038441967,52.1605904151427,44.2759025825896,41.9650227808066,66.8799763713649,76.1971494594979,72.6182841421917,37.4393995397922,37.1570153827896,36.5583549149859,52.4907425166172,58.6435795491446,46.8822033501084,48.5778418262403,34.8912818219642,33.3100180153446,38.8909732825241,31.0370264142044,44.7358669980721,13.2520838333072,18.8173184665896,11.3047150593654,36.1378028332182,24.478968013479,49.6526936306792,37.6870322119648,34.9460971935922,21.9093295405533,16.7021716126497,25.4590284510811,20.8470348961101,18.5913314105218,47.4807966432976,86.6337815002595,78.2173373468664,18.4017384859532,22.2956681618087,19.7154533555765,16.4424786795446,7.25026074212081,14.1020032111584,24.1144604204929,18.2679286987285,19.832932764021,17.0316583824463,9.64227398512779,17.4676561948249,3.70792451601561,8.38676270135488,15.9229899350977,8.25010934731787,12.367125033782,7.75800405016355,24.2309289583559,29.8636412951778,24.5052646971742,19.9256503062701,10.4239158320151,15.5974710058286,7.49714339731082,20.0719456802462,30.652540388848,34.5549468310377,22.4233373048037,21.2243829584174,26.8046577481833,22.7137768294861,11.6096874789361,10.4501855312478,12.6361379216837,9.25944165900485,25.6337272636526,35.8647282916218,27.7295679900238,24.1127708537144,15.7844678031081,22.4199010498487,22.6758173434544,12.1590584247337,24.1436152084783,22.6927296201383,19.7065259063623,21.2619860454748,16.9608822027615,15.6713474934975,18.108828003899,17.9130840136644,16.1509033082044,13.3820911699652,12.2190304740105,15.9486844852336,14.540615718828,14.4049649168812,15.1516630774535,18.1023093207612,17.123649530499,20.4629871380359,17.7060444923749,12.6106569756543,13.6584675428189,12.148392341853,10.701082860053,12.2807989437279,14.4903076092093,13.4206418760372,20.6084149592845,23.3593470100976,25.1118275067686,17.7181879664575,22.6085545567348,22.0624838267417,14.8197580520407,16.5380490191141,16.9007313322101,16.3594038456801,21.8283368310475,14.658206970437,12.3154252312132,11.3405189063456,9.16331209459865,20.6728463990471,20.3169766882213,18.1218558661474,20.4841333029328,16.4517858158009,10.1436962105772,18.124968178233,17.8436288194216,12.2737684808057,9.80166325425988,11.9564219863478,13.815888050041,15.5480426541469,20.4552312690133,7.00749444007595,3.53806191203765,5.62155280962134,8.92584534109413,5.06472035480075,11.7127891819453,11.5078454980324,4.21551589615092,11.2570179407113,5.75072826109418,8.55924179637558,15.601883655728,21.2166257475574,19.3749206603665,15.9206362049911,9.79191907883005,20.4650724712124,19.5557971730431,21.0483906361233,19.4792906079457,14.9080569123216,13.0924002487308,8.97614780145875,12.2955412402829,11.2946991720875,11.9591076493115,12.1258852889646,11.2245238212832,8.96824163205372,25.6345182696763,19.0366989336548,15.7364567366092,11.0374698521893,26.1697461680101,20.9808919000044,13.9344703570174,11.6136626514012,23.347608236803,21.4741309363151,23.4811503528751,24.3748173911603,26.5130422158049,24.6276581786284,23.4790206971439,23.0882127749936,22.5314033429518,11.5675673911851,16.6069899693674,22.2582004584069,11.4020871547503,10.8880281161873,30.5313818181915,23.0641604347232,21.1626489875326,20.5579536933929,30.1207930738388,20.5981549122431,10.0787034335606,18.5402202033528,14.9728898921583,20.2263525078922,35.8423269154996,38.1601510018291,14.9793426531667,25.3886142584147,33.8919751510817,25.2917701337279,20.5714671025037,20.155676389034,21.5559216988778,16.1366423030738,4.92810586933792,5.93129798418696,21.3912546113313,12.2015827176695,7.10443477461984,8.32318364008551,9.90790455226033,9.02774948597837,18.9462543809403,19.8405073151245,9.05615668228619,13.002372681683,8.88933731374616,5.27431679613135,6.28793447516716,8.23601423543482,9.00885678967433,8.95689294871411,7.46279858543889,8.59203556213602,22.1435195506795,16.6721963044016,15.1207477150522,13.7998275369549,12.6650286972783,8.4964538222437,7.52146447100557,15.1818446350737,13.6095721956383,16.776161453347,1.12738587736838,18.5400517094534,23.1641886639937,16.9172533859321,19.5031333451374,15.0370951686793,8.56707842114004,8.46328501485676,6.71099804324549,2.41584120826006,3.45636007509439,18.9606672376907,20.6779719595967,17.8717065466799,15.7204195803132,12.8899220880587,15.0997829633761,17.9091219784754,11.9628517011408,13.6304707429999,12.116882258145,14.518970659705,12.8644402576473,16.5484367621367,15.5446279901487,10.4295976462997,7.99149432146633,7.17710852875806,8.22634620183984,8.30715254338419,8.82107634620555,12.0880072016395,7.5028932677673,26.5833215138743,31.0613513439387,27.6195141904306,20.6242384838183,21.997207339992,34.2541259885321,33.2373314851468,36.4512150125175,31.5224842256954,34.4388230827996,31.583379016861,29.8907561042429,26.3356416444681,30.3905818242359,16.7743634777123,23.0574478890781,29.5988048604523,18.4464784075341,20.6035057238894,15.4041220604071,19.2049880940486,19.5179060915485,18.4853814558355,14.5144336578318,17.0947156921001,15.9096249007049,16.1939855036245,18.7732608030666,19.6767404872979,21.0163809409686,25.0238164228475,29.4867557051457,18.4574838405711,15.4983523465759,19.1857269954674,18.8218760830661,18.0229114809271,19.7562210702594,17.3626009548976,15.75327720612,25.2514022245982,21.7102083167239,17.139779933348,27.8277109355389,17.8177367363861,19.2906610981141,25.7304895276084,15.6734177658424,8.16510005383534,10.3295699317175,11.2501623750953,12.0571274522619
|phase1_expression=20.4990524294136,37.3403686174116,34.1249429542152,128.547289805403,118.211392267338,22.831580980017,33.8738328863512,17.4316486646128,5.77233760821834,8.19225842126977,7.70480857014772,6.30200056063158,20.5440875917447,20.3689537636264,7.99463428357591,6.07425802169478,2.79824751251259,20.0318475002481,19.8815928728321,21.2194825899015,11.4808441703944,16.8794617041505,32.6499736423669,25.9187724925319,25.2350209173887,38.4735415957064,31.8763877157715,22.1935369666466,27.1733489822615,24.1948924569534,21.7295900442199,12.7006134691926,6.1506478758457,15.8481681015439,20.7973166220918,20.94556531517,22.662798545123,23.4377713212668,15.626706890476,12.0410461113974,18.2351761289614,17.7591826089196,19.9059244742773,12.4637849795822,12.6721164024393,18.1711284640065,39.90195856175,65.8435972268948,36.6875925166568,41.6079984018967,32.3368633954587,63.2511283205875,20.6372605451016,32.6412963905105,27.8957853288245,18.2654199585522,28.3668105539369,20.1112115988203,47.1397353802863,59.2469896784677,60.213983333087,24.3968063089775,29.3467282716676,36.8958884085374,41.5323872278129,41.2078466668738,51.830819119684,85.6806820867067,51.5337373173134,66.0179038441967,52.1605904151427,44.2759025825896,41.9650227808066,66.8799763713649,76.1971494594979,72.6182841421917,37.4393995397922,37.1570153827896,36.5583549149859,52.4907425166172,58.6435795491446,46.8822033501084,48.5778418262403,34.8912818219642,33.3100180153446,38.8909732825241,31.0370264142044,44.7358669980721,13.2520838333072,18.8173184665896,11.3047150593654,36.1378028332182,24.478968013479,49.6526936306792,37.6870322119648,34.9460971935922,21.9093295405533,16.7021716126497,25.4590284510811,20.8470348961101,18.5913314105218,47.4807966432976,86.6337815002595,78.2173373468664,18.4017384859532,22.2956681618087,19.7154533555765,16.4424786795446,7.25026074212081,14.1020032111584,24.1144604204929,18.2679286987285,19.832932764021,17.0316583824463,9.64227398512779,17.4676561948249,3.70792451601561,8.38676270135488,15.9229899350977,8.25010934731787,12.367125033782,7.75800405016355,24.2309289583559,29.8636412951778,24.5052646971742,19.9256503062701,10.4239158320151,15.5974710058286,7.49714339731082,20.0719456802462,30.652540388848,34.5549468310377,22.4233373048037,21.2243829584174,26.8046577481833,22.7137768294861,11.6096874789361,10.4501855312478,12.6361379216837,9.25944165900485,25.6337272636526,35.8647282916218,27.7295679900238,24.1127708537144,15.7844678031081,22.4199010498487,22.6758173434544,12.1590584247337,24.1436152084783,22.6927296201383,19.7065259063623,21.2619860454748,16.9608822027615,15.6713474934975,18.108828003899,17.9130840136644,16.1509033082044,13.3820911699652,12.2190304740105,15.9486844852336,14.540615718828,14.4049649168812,15.1516630774535,18.1023093207612,17.123649530499,20.4629871380359,17.7060444923749,12.6106569756543,13.6584675428189,12.148392341853,10.701082860053,12.2807989437279,14.4903076092093,13.4206418760372,20.6084149592845,23.3593470100976,25.1118275067686,17.7181879664575,22.6085545567348,22.0624838267417,14.8197580520407,16.5380490191141,16.9007313322101,16.3594038456801,21.8283368310475,14.658206970437,12.3154252312132,11.3405189063456,9.16331209459865,20.6728463990471,20.3169766882213,18.1218558661474,20.4841333029328,16.4517858158009,10.1436962105772,18.124968178233,17.8436288194216,12.2737684808057,9.80166325425988,11.9564219863478,13.815888050041,15.5480426541469,20.4552312690133,7.00749444007595,3.53806191203765,5.62155280962134,8.92584534109413,5.06472035480075,11.7127891819453,11.5078454980324,4.21551589615092,11.2570179407113,5.75072826109418,8.55924179637558,15.601883655728,21.2166257475574,19.3749206603665,15.9206362049911,9.79191907883005,20.4650724712124,19.5557971730431,21.0483906361233,19.4792906079457,14.9080569123216,13.0924002487308,8.97614780145875,12.2955412402829,11.2946991720875,11.9591076493115,12.1258852889646,11.2245238212832,8.96824163205372,25.6345182696763,19.0366989336548,15.7364567366092,11.0374698521893,26.1697461680101,20.9808919000044,13.9344703570174,11.6136626514012,23.347608236803,21.4741309363151,23.4811503528751,24.3748173911603,26.5130422158049,24.6276581786284,23.4790206971439,23.0882127749936,22.5314033429518,11.5675673911851,16.6069899693674,22.2582004584069,11.4020871547503,10.8880281161873,30.5313818181915,23.0641604347232,21.1626489875326,20.5579536933929,30.1207930738388,20.5981549122431,10.0787034335606,18.5402202033528,14.9728898921583,20.2263525078922,35.8423269154996,38.1601510018291,14.9793426531667,25.3886142584147,33.8919751510817,25.2917701337279,20.5714671025037,20.155676389034,21.5559216988778,16.1366423030738,4.92810586933792,5.93129798418696,21.3912546113313,12.2015827176695,7.10443477461984,8.32318364008551,9.90790455226033,9.02774948597837,18.9462543809403,19.8405073151245,9.05615668228619,13.002372681683,8.88933731374616,5.27431679613135,6.28793447516716,8.23601423543482,9.00885678967433,8.95689294871411,7.46279858543889,8.59203556213602,22.1435195506795,16.6721963044016,15.1207477150522,13.7998275369549,12.6650286972783,8.4964538222437,7.52146447100557,15.1818446350737,13.6095721956383,16.776161453347,1.12738587736838,18.5400517094534,23.1641886639937,16.9172533859321,19.5031333451374,15.0370951686793,8.56707842114004,8.46328501485676,6.71099804324549,2.41584120826006,3.45636007509439,18.9606672376907,20.6779719595967,17.8717065466799,15.7204195803132,12.8899220880587,15.0997829633761,17.9091219784754,11.9628517011408,13.6304707429999,12.116882258145,14.518970659705,12.8644402576473,16.5484367621367,15.5446279901487,10.4295976462997,7.99149432146633,7.17710852875806,8.22634620183984,8.30715254338419,8.82107634620555,12.0880072016395,7.5028932677673,26.5833215138743,31.0613513439387,27.6195141904306,20.6242384838183,21.997207339992,34.2541259885321,33.2373314851468,36.4512150125175,31.5224842256954,34.4388230827996,31.583379016861,29.8907561042429,26.3356416444681,30.3905818242359,16.7743634777123,23.0574478890781,29.5988048604523,18.4464784075341,20.6035057238894,15.4041220604071,19.2049880940486,19.5179060915485,18.4853814558355,14.5144336578318,17.0947156921001,15.9096249007049,16.1939855036245,18.7732608030666,19.6767404872979,21.0163809409686,25.0238164228475,29.4867557051457,18.4574838405711,15.4983523465759,19.1857269954674,18.8218760830661,18.0229114809271,19.7562210702594,17.3626009548976,15.75327720612,25.2514022245982,21.7102083167239,17.139779933348,27.8277109355389,17.8177367363861,19.2906610981141,25.7304895276084,15.6734177658424,8.16510005383534,10.3295699317175,11.2501623750953,12.0571274522619
|short_description=p1@Mpnd
|short_description=p1@Mpnd
}}
}}

Revision as of 08:31, 18 April 2012

Short description:p1@Mpnd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mpnd_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000149441, ENSMUST00000159996, ENSMUST00000162883, NM_026530, uc008dap.1_5end
EntrezGene:Mpnd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mpnd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I537.34
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I634.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I3128.55
CD326+ enterocyte, pool2.CNhs13197.11849-124I4118.21
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I722.83
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I833.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E917.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.30
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E420.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.37
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.03
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A621.22
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H216.88
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I932.65
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D125.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.24
GP2+ M cell, pool1.CNhs13228.11845-124H938.47
GP2+ M cell, pool2.CNhs13231.11846-124I131.88
GP2+ M cell, pool3.CNhs13240.11847-124I222.19
Ileum epithelium, pool1.CNhs13199.10252-104B927.17
Ileum epithelium, pool2.CNhs13232.10253-104C124.19
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C821.73
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F520.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F620.95
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F722.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H115.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H217.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H419.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.67
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B318.17
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B739.90
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C265.84
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B836.69
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C341.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C432.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C463.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A220.64
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I932.64
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A127.90
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.27
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E128.37
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C520.11
Mouse Granule cells, donor1.CNhs12131.11713-123C347.14
Mouse Granule cells, donor2.CNhs12357.11731-123E359.25
Mouse Granule cells, donor3.CNhs12108.11636-122C760.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C624.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D129.35
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C736.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E741.53
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D241.21
Mouse Microglia, donor1.CNhs12629.11718-123C851.83
Mouse Microglia, donor2.CNhs12634.11736-123E885.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D551.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F566.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D952.16
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F144.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D541.97
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D266.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F276.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D672.62
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F337.16
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D736.56
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D452.49
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F458.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D846.88
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E448.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.89
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I633.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D638.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F631.04
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E144.74
Mouse Schwann, donor1.CNhs12507.11728-123D913.25
Mouse Schwann, donor2.CNhs12573.11746-123F918.82
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.30
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F736.14
Mouse hepatocyte, donor1.CNhs13078.11714-123C424.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C849.65
Mouse hepatocyte, donor6.CNhs13090.11822-124F437.69
Mouse hepatocyte, donor8.CNhs13091.11824-124F634.95
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A721.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E325.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I820.85
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G618.59
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H147.48
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I886.63
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B678.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G118.40
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G222.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G319.72
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B616.44
accessory axillary lymph node, adult.CNhs10475.1063-29H97.25
adrenal gland, adult.CNhs10508.49-24D714.10
adrenal gland, embryo E14.CNhs11038.406-44C524.11
adrenal gland, embryo E16.CNhs11004.1254-43D618.27
adrenal gland, embryo E17.CNhs11043.1263-45I119.83
adrenal gland, embryo E18.CNhs11026.1262-18F517.03
adrenal gland, neonate N00.CNhs11191.1311-23C19.64
adrenal gland, neonate N25.CNhs11223.1377-27I317.47
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H18.39
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F58.25
bone (os femoris), neonate N16.CNhs11225.1525-43A612.37
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B229.86
cerebellum, neonate N30.CNhs11135.1395-42I224.51
colon, adult.CNhs10468.36-18H719.93
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.42
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D115.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.50
corpora quadrigemina, adult.CNhs10501.16-22A420.07
corpus striatum, adult.CNhs10487.19-21D830.65
corpus striatum, neonate N00.CNhs11226.630-43F134.55
cortex, adult.CNhs10473.12-14D522.42
cortex, neonate N30.CNhs11107.1392-42F221.22
diencephalon, adult.CNhs10482.20-12F226.80
diencephalon, neonate N30.CNhs11201.1388-42B222.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.45
epididymis, adult.CNhs10490.58-23B212.64
eyeball, adult.CNhs10484.31-12G49.26
eyeball, embryo E12.CNhs11016.345-16C625.63
eyeball, embryo E14.CNhs10521.399-16E235.86
eyeball, embryo E15.CNhs10593.426-16C927.73
eyeball, embryo E17.CNhs11023.1261-18D424.11
eyeball, neonate N00.CNhs11207.633-15C615.78
eyeball, neonate N01.CNhs11140.1532-43E722.42
eyeball, neonate N02.CNhs11205.1551-44G822.68
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E224.14
forelimb, embryo E12.CNhs10600.359-14H222.69
forelimb, embryo E13.CNhs10589.384-1E219.71
forelimb, embryo E14.CNhs10577.413-26A821.26
forelimb, embryo E15.CNhs11007.437-20E716.96
forelimb, embryo E17.CNhs10598.1517-43C415.67
forelimb, embryo E18.CNhs11008.1520-43B518.11
gonad, embryo E13.CNhs11044.1564-45I617.91
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.15
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.38
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.22
heart, embryo E11.CNhs10586.331-24E915.95
heart, embryo E12.CNhs11015.353-12F514.54
heart, embryo E13.CNhs11013.376-3I914.40
heart, embryo E14.CNhs10597.403-26D415.15
heart, embryo E15.CNhs11017.431-16C818.10
heart, embryo E16.CNhs11021.457-17C617.12
heart, embryo E17.CNhs11025.479-18E520.46
heart, embryo E18.CNhs11030.1283-20G317.71
heart, neonate N00.CNhs11213.639-21E312.61
heart, neonate N03.CNhs11221.1349-25I213.66
heart, neonate N10.CNhs11118.749-24G112.15
heart, neonate N16.CNhs11209.782-15G110.70
heart, neonate N20.CNhs11127.821-26I612.28
heart, neonate N25.CNhs11196.1351-25D314.49
heart, neonate N30.CNhs11202.1390-42D213.42
hippocampus, adult.CNhs10478.13-16E820.61
hippocampus, neonate N00.CNhs11228.627-43G123.36
intestinal mucosa, adult.CNhs10506.860-29I325.11
intestine, adult.CNhs10496.178-9A317.72
intestine, embryo E12.CNhs11019.1251-16I522.61
intestine, embryo E13.CNhs11010.381-16D522.06
intestine, embryo E15.CNhs10602.976-16D814.82
intestine, embryo E16.CNhs10585.463-22H416.54
intestine, embryo E17.CNhs10582.482-18D316.90
intestine, embryo E18.CNhs10526.1289-20F716.36
intestine, neonate N00.CNhs11126.644-26D121.83
intestine, neonate N01.CNhs11192.1322-23E914.66
intestine, neonate N06.CNhs11102.688-20B812.32
intestine, neonate N07.CNhs11095.720-20F211.34
intestine, neonate N10.CNhs11098.755-23A59.16
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E320.32
intestine, neonate N30.CNhs11131.1384-42G118.12
kidney, embryo E14.CNhs10606.411-4I920.48
kidney, embryo E15.CNhs10997.434-16F816.45
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I218.12
kidney, embryo E18.CNhs11001.1288-20C717.84
kidney, neonate N00.CNhs11214.646-21G712.27
kidney, neonate N10.CNhs11206.758-6D59.80
kidney, neonate N20.CNhs11113.832-19I111.96
kidney, neonate N25.CNhs11122.1353-25F313.82
kidney, neonate N30.CNhs11203.1385-42H115.55
liver, adult pregnant day01.CNhs10466.508-5B220.46
liver, embryo E12.CNhs10601.355-15F87.01
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D78.93
liver, embryo E16.CNhs10523.462-17F55.06
liver, embryo E17.CNhs10510.481-18A311.71
liver, embryo E18.CNhs10579.499-43G411.51
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G211.26
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H28.56
liver, neonate N10.CNhs11115.751-24B915.60
liver, neonate N20.CNhs11220.823-25A321.22
liver, neonate N25.CNhs11198.1368-26H119.37
liver, neonate N30.CNhs11106.1382-42D115.92
lung, adult.CNhs10474.28-22B19.79
lung, embryo E12.CNhs10522.354-16G220.47
lung, embryo E14.CNhs10604.404-26F819.56
lung, embryo E15.CNhs11020.432-17C521.05
lung, embryo E16.CNhs10998.458-17B619.48
lung, embryo E17.CNhs10605.480-44A614.91
lung, embryo E18.CNhs10583.1287-20I613.09
lung, neonate N00.CNhs11224.640-42C68.98
lung, neonate N06.CNhs11212.683-20E512.30
lung, neonate N07.CNhs11111.715-19A311.29
lung, neonate N10.CNhs11219.750-23E611.96
lung, neonate N20.CNhs11109.822-18A412.13
lung, neonate N25.CNhs11119.1359-25C711.22
lung, neonate N30.CNhs11133.1394-42H28.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A125.63
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A119.04
mammary gland, adult lactating day02.CNhs10480.595-22B615.74
mammary gland, adult pregnant day19.CNhs10476.588-5H211.04
medulla oblongata, adult.CNhs10477.17-12C226.17
medulla oblongata, neonate N30.CNhs11200.1396-42A320.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.61
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.35
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E323.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D724.37
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D826.51
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D924.63
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.53
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I716.61
ovary, embryo E18.CNhs11040.505-44H722.26
ovary, neonate N00.CNhs11217.1299-22I411.40
oviduct, adult pregnant day01.CNhs10500.988-6G610.89
pancreas, adult.CNhs10486.34-16E430.53
pancreas, embryo E14.CNhs11012.405-44F423.06
pancreas, embryo E15.CNhs11042.1556-45F221.16
pancreas, embryo E16.CNhs11003.460-26E520.56
pancreas, embryo E17.CNhs10599.1558-45G330.12
pancreas, embryo E18.CNhs10580.1535-43I720.60
pancreas, neonate N00.CNhs11105.645-26G910.08
pancreas, neonate N01.CNhs11138.1531-43D718.54
pancreas, neonate N02.CNhs11139.1539-43D814.97
pancreas, neonate N16.CNhs11136.787-43B620.23
pancreas, neonate N25.CNhs11094.1555-45E235.84
pancreas, neonate N30.CNhs11182.1548-44H538.16
pituitary gland, adult.CNhs10493.21-1G814.98
pituitary gland, embryo E12.CNhs11018.346-16E625.39
pituitary gland, embryo E13.CNhs11009.370-44C733.89
pituitary gland, embryo E14.CNhs11037.398-44A525.29
pituitary gland, embryo E15.CNhs10592.427-16B920.57
pituitary gland, embryo E16.CNhs11036.449-43F620.16
pituitary gland, embryo E17.CNhs11039.1265-44F521.56
pituitary gland, neonate N00.CNhs11190.1308-22E916.14
placenta, adult pregnant day10.CNhs10472.539-13I74.93
placenta, adult pregnant day17.CNhs10464.577-18G35.93
prostate, adult.CNhs10470.859-1F821.39
skin, adult.CNhs10492.30-1C312.20
skin, neonate N00.CNhs11124.650-25G47.10
skin, neonate N03.CNhs11215.662-22H38.32
skin, neonate N06.CNhs11097.693-20I59.91
skin, neonate N10.CNhs11108.762-6C49.03
small intestine, neonate N16.CNhs11114.790-21I118.95
spinal cord, adult.CNhs10505.24-13C919.84
spleen, adult.CNhs10465.25-2G29.06
spleen, embryo E16.CNhs11035.461-43C113.00
spleen, embryo E18.CNhs11011.1271-21F28.89
spleen, neonate N10.CNhs11116.752-24D15.27
spleen, neonate N20.CNhs11112.824-19H16.29
spleen, neonate N25.CNhs11099.1354-25G38.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.46
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E322.14
stomach, embryo E15.CNhs10603.1252-16G816.67
stomach, embryo E16.CNhs11022.459-17D415.12
stomach, embryo E17.CNhs11006.1035-18D513.80
stomach, embryo E18.CNhs10999.1286-20C612.67
stomach, neonate N03.CNhs11193.1340-24B88.50
stomach, neonate N07.CNhs11210.718-18A97.52
stomach, neonate N25.CNhs11104.1355-25E415.18
stomach, neonate N30.CNhs11134.1386-42I113.61
submandibular gland, adult.CNhs10469.59-29C116.78
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F518.54
testis, embryo E15.CNhs11034.443-27C523.16
testis, embryo E16.CNhs11033.470-26G516.92
testis, embryo E17.CNhs11029.486-18I519.50
testis, embryo E18.CNhs11027.503-18G515.04
testis, neonate N00.CNhs11189.1300-22B78.57
testis, neonate N07.CNhs11222.726-26I48.46
testis, neonate N10.CNhs11204.763-44D96.71
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B518.96
thymus, embryo E14.CNhs11041.402-44I420.68
thymus, embryo E15.CNhs11005.430-45I217.87
thymus, embryo E16.CNhs11002.456-26C515.72
thymus, embryo E17.CNhs10581.478-18C112.89
thymus, embryo E18.CNhs10595.1273-19G415.10
thymus, neonate N02.CNhs11181.1541-43F817.91
thymus, neonate N03.CNhs11137.2104-43C711.96
thymus, neonate N06.CNhs11197.681-26C413.63
thymus, neonate N07.CNhs11211.713-19D312.12
thymus, neonate N10.CNhs11194.748-24E414.52
thymus, neonate N20.CNhs11186.820-7A212.86
thymus, neonate N25.CNhs11125.1362-25G716.55
thymus, neonate N30.CNhs11132.1393-42G215.54
tongue, adult.CNhs10499.32-1B410.43
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.23
urinary bladder, adult.CNhs10481.879-12E48.31
uterus, adult pregnant day19.CNhs10497.590-15F58.82
uterus, adult.CNhs10509.92-27E512.09
vagina, adult.CNhs10502.89-27D57.50
vesicular gland, adult.CNhs10491.51-27F826.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A131.06
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.62
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A636.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.52
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A834.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.58
whole body, embryo E11.CNhs11014.324-5I829.89
whole body, embryo E12.CNhs10587.857-27C926.34
whole body, embryo E13.CNhs10512.372-23H230.39
whole body, embryo E14.5.CNhs10578.420-27D216.77
whole body, embryo E14.CNhs10519.395-14B123.06
whole body, embryo E16.CNhs10514.453-14F229.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.40
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.51
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.91
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.77
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.68
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.02
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G525.02
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G529.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.46
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.19
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G525.25
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.83
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.82
whole body, embryo E17.5.CNhs10513.490-9F919.29
whole body, embryo E17.CNhs10517.475-3I525.73
whole body, embryo E18.CNhs10516.493-3B315.67
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C610.33
whole body, neonate N06.CNhs10515.692-21D111.25
whole body, neonate N10.CNhs10518.761-6B412.06





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:56148622..56148666,%2B&oldid=852194"