FFCP PHASE1:Mm9::chr17:71824625..71824680,-: Difference between revisions
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|description=CAGE_peak_1_at_Smchd1_5end | |description=CAGE_peak_1_at_Smchd1_5end | ||
|id=chr17:71824625..71824680,- | |id=chr17:71824625..71824680,- | ||
|ontology_enrichment_celltype=CL:0000542!3.24e-07!13;CL:0000051!3.24e-07!13;CL:0000838!5.57e-07!12;CL:0000988!5.76e-07!32;CL:0002032!5.76e-07!32;CL:0000037!5.76e-07!32;CL:0000566!5.76e-07!32;CL:0000837!5.76e-07!32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|phase1_expression=14.2532473923267,5.58360652222978,5.0049916332849,7.25914107136392,5.00895729946347,14.6054966563344,14.0167584357315,66.4985115724118,80.671937792905,77.4753582125798,17.8066686954525,23.3732425856336,83.0323540166348,68.01307308198,49.9664642723494,50.6188168474565,30.0811607595103,83.4397427372539,86.1078643044039,60.6877202071183,15.7330086779479,32.6667229450913,35.5231713228952,13.4393635146462,11.4704640533585,5.16808767703518,6.03066794622705,7.97243560937789,8.7410772949932,14.1136872665561,10.8647950221099,13.9706748161119,17.8368788399525,0,17.0422455653252,18.1195763440757,25.3170001765338,14.2300754450549,17.1893775795236,17.2762835511353,12.3528612486513,17.0761371239611,11.6522484727477,18.5068322424099,16.6258167200004,13.5824596599644,2.34717403304412,4.14247797122848,2.19686182734472,4.47188767870852,3.63964696225943,4.31257693094915,88.4214333924271,126.938374851985,105.197359131591,5.91696702882678,8.30946975822394,8.76642556871652,10.9250888864183,7.40587370980846,7.60597684207415,1.35537812827653,3.55717918444456,2.6996991518442,4.94433181283487,2.1314403448383,4.19440154725767,5.76327457982332,15.2423730093462,9.18040380655497,11.9885227970288,7.14127461009509,7.06779331045163,14.4539143073646,12.4599112323707,9.19218786610021,9.91042928994498,12.3856717942632,10.752457327937,12.3973110466382,11.0700048758916,13.022834263919,7.53794097303729,7.31591393041184,11.7654650788144,12.0797720044204,12.2439645487229,12.8615617619457,6.51245262665383,14.9631689011435,31.5952292684829,14.6272059086836,1.3599426674155,2.69851595818909,3.89865850468601,8.06448396775204,10.3928870897496,15.5091593546033,9.61208217030615,11.3068663843309,14.084341977668,6.41632387071589,22.9324715735981,42.6640021891999,14.0719176657289,13.4280728701802,9.0994400102661,15.7573754012303,161.577239395835,17.813056687779,14.9197381018877,13.7009465240464,15.681853813412,12.2085338847624,15.521709341913,14.2003248202533,19.5284024510155,20.6777080395474,38.9228642857945,18.9267214438469,31.5803371398363,30.0622656943838,16.775258509631,20.4946557908083,20.7352239745321,12.517395705221,47.8062346778622,34.1944556666242,31.2592758599739,18.4242486467932,25.1625331550245,26.890031352153,23.9877561865342,22.2472447877388,14.5451631191692,16.8730913590468,15.6832620329487,27.8671614166608,16.1742565397552,10.1012090825508,25.2433659347645,18.6220704591113,20.8872070574205,24.1127708537144,30.1401691240382,31.3878614697882,25.4868690802462,20.1788629176432,24.7903191872769,35.3628369913822,25.5129130037726,22.1387689751851,29.1949611686878,23.6811473235073,21.1955600500182,18.1121182804829,26.6841011179029,35.256663274716,23.5855704498342,25.0622184767957,18.2930326785255,18.7264543919455,23.674473558521,17.3152523937715,14.8096428371883,14.8821724640261,14.4867636755794,12.7274223180215,15.9623054416076,16.0884114797513,14.3491792896165,15.2047986922346,19.7595103761946,13.4206418760372,22.2907345477975,28.4016730166825,7.26921322564356,11.6358249331959,26.2344548158338,24.1526138734856,26.0312271870629,22.7902382824377,19.5692678583486,13.6962450801043,13.7613427847908,11.6936257854048,11.5614196048124,8.35617182572834,11.6978452271472,25.1669434423182,12.5360068927323,9.55878111620963,7.2073802362171,28.1051341019933,36.0664754153857,28.511185898344,21.9166310499417,19.7783012090698,23.2078091246024,14.465794502001,13.0308944108341,13.0800993757109,11.2651998293117,35.2043173060958,33.4150291692445,40.2503181168888,40.3691641563121,30.6294992885569,24.9533334745791,22.4402987211632,15.5649817704034,18.6701760967895,21.5652309791032,13.0249331683976,16.5379966750717,10.6083128737787,9.86685774370517,8.68398338454061,26.4197061938245,24.633883530163,35.0374699350356,32.7608015546113,29.1015907877743,26.2984824183651,19.9956658344252,16.1960927721973,29.3201368037515,20.3747514476873,23.2803962239931,25.5626770956551,22.6217326244323,23.2884984316234,12.0633027151418,11.9659250440116,20.1623351937805,17.9358885098076,15.7339578188036,16.9956945558695,13.114795630134,12.1186045058099,20.5080342620567,21.0836921920185,28.4358885007295,27.9593493604486,21.8342700600746,22.0799694015289,22.2645885921192,21.9191893433484,18.5785255634866,26.3483479465882,19.5877317587411,12.4645922567079,17.7546785695398,23.2607873391275,9.2921596837974,20.1507928008635,14.511530734308,14.1453809816924,6.79194353625777,15.6791925451403,14.9888410037568,19.2672876623078,21.746340081468,14.2216541071117,6.32511651449993,7.21948802737308,21.7881347682424,24.8484309763208,8.02023839453078,18.4329850127169,16.847322196016,20.334045206636,19.087686389846,8.52501857520878,25.8138878870081,19.0648863777438,8.82113592219848,20.281009111802,18.2454802166373,26.1758094188196,20.2932984805332,25.9342621597197,12.8251568117134,14.4631735568198,50.5777807161644,24.3536504196603,31.6682641802207,46.9037457941681,69.9874445931649,52.3902016642937,37.3952545986482,42.965095863363,38.0049927962165,5.72802370809068,25.1487114897003,28.66804486488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|phase1_expression=14.2532473923267,5.58360652222978,5.0049916332849,7.25914107136392,5.00895729946347,14.6054966563344,14.0167584357315,66.4985115724118,80.671937792905,77.4753582125798,17.8066686954525,23.3732425856336,83.0323540166348,68.01307308198,49.9664642723494,50.6188168474565,30.0811607595103,83.4397427372539,86.1078643044039,60.6877202071183,15.7330086779479,32.6667229450913,35.5231713228952,13.4393635146462,11.4704640533585,5.16808767703518,6.03066794622705,7.97243560937789,8.7410772949932,14.1136872665561,10.8647950221099,13.9706748161119,17.8368788399525,0,17.0422455653252,18.1195763440757,25.3170001765338,14.2300754450549,17.1893775795236,17.2762835511353,12.3528612486513,17.0761371239611,11.6522484727477,18.5068322424099,16.6258167200004,13.5824596599644,2.34717403304412,4.14247797122848,2.19686182734472,4.47188767870852,3.63964696225943,4.31257693094915,88.4214333924271,126.938374851985,105.197359131591,5.91696702882678,8.30946975822394,8.76642556871652,10.9250888864183,7.40587370980846,7.60597684207415,1.35537812827653,3.55717918444456,2.6996991518442,4.94433181283487,2.1314403448383,4.19440154725767,5.76327457982332,15.2423730093462,9.18040380655497,11.9885227970288,7.14127461009509,7.06779331045163,14.4539143073646,12.4599112323707,9.19218786610021,9.91042928994498,12.3856717942632,10.752457327937,12.3973110466382,11.0700048758916,13.022834263919,7.53794097303729,7.31591393041184,11.7654650788144,12.0797720044204,12.2439645487229,12.8615617619457,6.51245262665383,14.9631689011435,31.5952292684829,14.6272059086836,1.3599426674155,2.69851595818909,3.89865850468601,8.06448396775204,10.3928870897496,15.5091593546033,9.61208217030615,11.3068663843309,14.084341977668,6.41632387071589,22.9324715735981,42.6640021891999,14.0719176657289,13.4280728701802,9.0994400102661,15.7573754012303,161.577239395835,17.813056687779,14.9197381018877,13.7009465240464,15.681853813412,12.2085338847624,15.521709341913,14.2003248202533,19.5284024510155,20.6777080395474,38.9228642857945,18.9267214438469,31.5803371398363,30.0622656943838,16.775258509631,20.4946557908083,20.7352239745321,12.517395705221,47.8062346778622,34.1944556666242,31.2592758599739,18.4242486467932,25.1625331550245,26.890031352153,23.9877561865342,22.2472447877388,14.5451631191692,16.8730913590468,15.6832620329487,27.8671614166608,16.1742565397552,10.1012090825508,25.2433659347645,18.6220704591113,20.8872070574205,24.1127708537144,30.1401691240382,31.3878614697882,25.4868690802462,20.1788629176432,24.7903191872769,35.3628369913822,25.5129130037726,22.1387689751851,29.1949611686878,23.6811473235073,21.1955600500182,18.1121182804829,26.6841011179029,35.256663274716,23.5855704498342,25.0622184767957,18.2930326785255,18.7264543919455,23.674473558521,17.3152523937715,14.8096428371883,14.8821724640261,14.4867636755794,12.7274223180215,15.9623054416076,16.0884114797513,14.3491792896165,15.2047986922346,19.7595103761946,13.4206418760372,22.2907345477975,28.4016730166825,7.26921322564356,11.6358249331959,26.2344548158338,24.1526138734856,26.0312271870629,22.7902382824377,19.5692678583486,13.6962450801043,13.7613427847908,11.6936257854048,11.5614196048124,8.35617182572834,11.6978452271472,25.1669434423182,12.5360068927323,9.55878111620963,7.2073802362171,28.1051341019933,36.0664754153857,28.511185898344,21.9166310499417,19.7783012090698,23.2078091246024,14.465794502001,13.0308944108341,13.0800993757109,11.2651998293117,35.2043173060958,33.4150291692445,40.2503181168888,40.3691641563121,30.6294992885569,24.9533334745791,22.4402987211632,15.5649817704034,18.6701760967895,21.5652309791032,13.0249331683976,16.5379966750717,10.6083128737787,9.86685774370517,8.68398338454061,26.4197061938245,24.633883530163,35.0374699350356,32.7608015546113,29.1015907877743,26.2984824183651,19.9956658344252,16.1960927721973,29.3201368037515,20.3747514476873,23.2803962239931,25.5626770956551,22.6217326244323,23.2884984316234,12.0633027151418,11.9659250440116,20.1623351937805,17.9358885098076,15.7339578188036,16.9956945558695,13.114795630134,12.1186045058099,20.5080342620567,21.0836921920185,28.4358885007295,27.9593493604486,21.8342700600746,22.0799694015289,22.2645885921192,21.9191893433484,18.5785255634866,26.3483479465882,19.5877317587411,12.4645922567079,17.7546785695398,23.2607873391275,9.2921596837974,20.1507928008635,14.511530734308,14.1453809816924,6.79194353625777,15.6791925451403,14.9888410037568,19.2672876623078,21.746340081468,14.2216541071117,6.32511651449993,7.21948802737308,21.7881347682424,24.8484309763208,8.02023839453078,18.4329850127169,16.847322196016,20.334045206636,19.087686389846,8.52501857520878,25.8138878870081,19.0648863777438,8.82113592219848,20.281009111802,18.2454802166373,26.1758094188196,20.2932984805332,25.9342621597197,12.8251568117134,14.4631735568198,50.5777807161644,24.3536504196603,31.6682641802207,46.9037457941681,69.9874445931649,52.3902016642937,37.3952545986482,42.965095863363,38.0049927962165,5.72802370809068,25.1487114897003,28.66804486488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| ||
|short_description=p1@Smchd1 | |short_description=p1@Smchd1 | ||
}} | }} | ||
Revision as of 08:45, 18 April 2012
| Short description: | p1@Smchd1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Smchd1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 2bp_to_ENSMUST00000024850, ENSMUST00000127430, NM_028887, uc008dmh.1_5end |
| EntrezGene: | Smchd1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
