Personal tools

FFCP PHASE1:Mm9::chr1:179372411..179372509,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Zfp238_5end
|description=CAGE_peak_1_at_Zfp238_5end
|id=chr1:179372411..179372509,+
|id=chr1:179372411..179372509,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=12.9720566154883,33.1526637257393,37.7649368693315,28.1291716515352,38.0680754759224,39.7873874431179,27.566291590272,8.65126267058561,5.63154888606667,3.04283884218592,1.54096171402954,2.31339261086476,5.82082481766099,5.85716696207283,11.6588416635482,9.92128810210147,8.39474253753776,20.3473096656063,19.7444784392264,23.7658205006897,17.9441342218757,9.92909512008853,9.14199261986274,19.9990528491758,18.3527424853736,21.2465826722557,20.6765758156356,22.8399506647042,18.812318526181,14.1136872665561,13.5255611499736,5.08024538767705,2.46025915033828,0,9.24325183204079,7.81302833184914,6.32925004413344,11.3003540298965,9.37602413428561,7.32933241563318,8.82347232046521,6.83045484958446,12.1377588257788,2.26614272356039,1.21652317463417,1.65192076945513,3.12956537739216,15.0437357902508,9.88587822305123,10.8880743481599,6.57936181639204,2.87505128729943,27.348564787411,4.35217285206807,4.36921938885203,5.65970759279083,4.29800159908135,3.6097046459421,11.1274053472779,5.28990979272033,6.33831403506179,1.35537812827653,4.4464739805557,6.74924787961049,1.97773272513395,5.6838409195688,4.49400165777607,6.91592949578798,35.3581577971909,29.8363123713036,33.021018932167,11.1403883917483,7.73039893330647,29.8877550084488,25.0156679357597,43.203282970671,19.82085857989,33.4540825783192,22.8873734551803,10.2871304429551,7.13603620098795,8.33461392890816,19.2636269310953,14.069065250792,20.7805616976462,11.1958862479994,6.83384067835694,7.08317894136142,4.61929779332423,5.13886608726142,13.0439019915755,11.185510400758,14.9593693415705,12.9528765993076,9.09686984426737,10.7526452903361,12.3591089715942,8.01022516116871,7.53379413348319,9.54016851177919,17.182897212755,3.84979432242953,12.7402619853323,35.5533351576666,12.7729714196616,10.8944742154292,14.1546844604139,15.5290076417922,3.88406825470758,3.85949561568544,3.29622120855658,3.65358573974569,4.84292544237723,4.37095657602605,5.52666923537813,7.53999547978053,3.70792451601561,5.06097749219691,13.2691582792481,13.2648816956876,13.471332626084,14.0613823409214,9.31958806090611,72.9024184558752,83.5692360185686,13.5392239260553,7.42853771936706,5.99902730993408,8.76784566804146,13.0317856282196,36.1425476226715,16.3350657746724,74.3968090422943,113.793378511997,19.1165000994795,27.9054972476543,8.1471491080253,19.9051152976149,22.492325500597,22.3068367239662,6.8963834770233,10.1156925950728,11.343914177737,12.3577950625286,24.1529571987214,21.3949912875699,30.1719553082327,21.9897865128163,2.80238390812695,5.8622884852024,6.862093842394,5.2606975782618,5.83899223373756,6.96504333044333,3.70407845534298,6.76716507182877,4.21327912387941,6.43369767786788,7.10408748488982,5.38527008592305,3.75241695969754,5.76198596675248,8.99629995223799,8.65762619688577,5.55361606394562,10.6965614585188,11.5357562601836,6.77238985729583,9.2153515951549,10.8350526292203,11.5928397650574,12.1345989563026,9.87975518809728,15.0311189011616,91.8967075225236,35.7079004956117,13.5471701023357,10.5780226665418,5.11891801284562,3.48355007790658,6.31450560478257,5.24377164020691,7.78323153457046,7.98947629672748,10.4396393539793,6.75265714368445,8.54539709920916,9.74886713001639,10.7230247915516,16.178749355776,10.8069024937347,13.1433240347882,8.15571974098251,8.79713547094912,3.38123207019241,6.51684249105006,6.98228953803453,9.8190147846446,11.0031574596208,10.3327103585722,12.0889020437859,14.6842625066943,14.8226313543574,2.33583148002532,4.91397487783007,4.04751802292737,7.30296436998611,7.47649195232492,11.4581633301639,9.49397253587675,6.32327384422638,7.68771956926628,4.31304619582064,8.18710084870708,9.04909252032226,11.36604950762,9.32866550313943,14.473305640901,11.4546977903295,5.68474235311454,4.88894929326078,6.28056817368196,5.86725620721255,6.03022526790537,4.76087281772027,14.6350235893349,9.93101407869003,11.2946991720875,11.4807433433391,13.9283817508377,14.6782234586011,16.3453436197108,16.5870412333199,14.1415477792864,16.2282210096282,6.34654516500885,16.6972613587304,21.4497386463732,2.45902418065013,37.3656972262472,12.9358369960665,13.6653560503823,20.4652227846159,19.1175038362042,19.6062833192507,30.2891887944051,19.4309136803949,21.3346776275258,15.8115111178609,13.4954952897159,5.67760340833074,5.52003371368491,8.1443479676788,10.3931177472697,53.0980553359851,5.82673526771955,7.86041248108353,13.9567759019365,16.832207894204,21.213025208131,14.7304127105886,16.7225515559653,21.746340081468,24.3348303610578,45.3300016872495,33.0033738394198,4.42571487479924,9.36317688962813,8.40831444587904,9.43082954139006,6.56158864476412,6.24290861607247,6.41741180348272,4.87143918583359,3.52007562095566,5.08396970073168,20.2886126210565,10.2229476823718,6.78150592122803,6.87567344180977,6.92359595218192,7.71462228801788,8.74442509889552,20.3967832211561,10.2522528478712,4.12773735926445,5.37064129372164,7.53473828018764,10.66214976224,13.7266903923914,6.62915876976036,6.57771825921193,6.21899882119907,9.54670618015114,4.4287039101359,5.69294507955176,6.80433647177348,7.10900206449194,5.8957892211468,9.44050424693745,12.8112856374271,13.6113089831695,11.5357326229696,14.9121435140862,17.4744810992099,3.43888055901151,4.96375471371293,5.25018208528929,5.29555276258697,4.56181538825101,5.28107573905893,8.33308063001281,13.9462928086195,23.4336597201226,19.8740704317927,24.3328562883697,4.45995473638361,5.85452455839515,7.14564526377873,13.4270021750611,12.715606706001,12.1397404015169,16.8366060979018,17.2652629411332,15.774808977585,20.3668893976418,25.2415911115959,19.0499446447852,25.7129184799452,16.3245876202952,1.55390167361845,3.13998498133165,3.02192309455341,23.1827512838629,9.3841237725591,10.4396425832341,8.1459984050045,12.5393026008841,67.770221114048,64.4455331110048,73.3306257202428,81.973967977939,70.5634995363762,88.381085994595,87.077902529903,84.2100650029292,69.3307885745833,63.6845183454738,9.02949923982337,9.57659696162474,9.39034831647738,7.29320151204882,9.4325923182592,19.1197248788015,14.6682840349066,11.3319281481392,13.4786068028562,13.8983466470089,12.4204856946217,13.9583492625696,14.327150642892,13.3172317002128,14.5886091147258,14.7651044297753,12.051969898265,14.2752823143142,15.6592642305257,13.689499572499,8.22886205724997,13.3106854619503,9.53744759789284,16.5694914960855,12.9870944973156,14.2152541258017,12.6220301282213,10.5227884575137,17.2471224584244,14.5896990631012,15.7784574105152,14.7756723563345,8.18462086339379,14.8739367538527,10.4169569929816,13.4897712086491,11.2287172053796,10.5286816483666,12.6250299165437,11.2501623750953,12.0571274522619
|phase1_expression=12.9720566154883,33.1526637257393,37.7649368693315,28.1291716515352,38.0680754759224,39.7873874431179,27.566291590272,8.65126267058561,5.63154888606667,3.04283884218592,1.54096171402954,2.31339261086476,5.82082481766099,5.85716696207283,11.6588416635482,9.92128810210147,8.39474253753776,20.3473096656063,19.7444784392264,23.7658205006897,17.9441342218757,9.92909512008853,9.14199261986274,19.9990528491758,18.3527424853736,21.2465826722557,20.6765758156356,22.8399506647042,18.812318526181,14.1136872665561,13.5255611499736,5.08024538767705,2.46025915033828,0,9.24325183204079,7.81302833184914,6.32925004413344,11.3003540298965,9.37602413428561,7.32933241563318,8.82347232046521,6.83045484958446,12.1377588257788,2.26614272356039,1.21652317463417,1.65192076945513,3.12956537739216,15.0437357902508,9.88587822305123,10.8880743481599,6.57936181639204,2.87505128729943,27.348564787411,4.35217285206807,4.36921938885203,5.65970759279083,4.29800159908135,3.6097046459421,11.1274053472779,5.28990979272033,6.33831403506179,1.35537812827653,4.4464739805557,6.74924787961049,1.97773272513395,5.6838409195688,4.49400165777607,6.91592949578798,35.3581577971909,29.8363123713036,33.021018932167,11.1403883917483,7.73039893330647,29.8877550084488,25.0156679357597,43.203282970671,19.82085857989,33.4540825783192,22.8873734551803,10.2871304429551,7.13603620098795,8.33461392890816,19.2636269310953,14.069065250792,20.7805616976462,11.1958862479994,6.83384067835694,7.08317894136142,4.61929779332423,5.13886608726142,13.0439019915755,11.185510400758,14.9593693415705,12.9528765993076,9.09686984426737,10.7526452903361,12.3591089715942,8.01022516116871,7.53379413348319,9.54016851177919,17.182897212755,3.84979432242953,12.7402619853323,35.5533351576666,12.7729714196616,10.8944742154292,14.1546844604139,15.5290076417922,3.88406825470758,3.85949561568544,3.29622120855658,3.65358573974569,4.84292544237723,4.37095657602605,5.52666923537813,7.53999547978053,3.70792451601561,5.06097749219691,13.2691582792481,13.2648816956876,13.471332626084,14.0613823409214,9.31958806090611,72.9024184558752,83.5692360185686,13.5392239260553,7.42853771936706,5.99902730993408,8.76784566804146,13.0317856282196,36.1425476226715,16.3350657746724,74.3968090422943,113.793378511997,19.1165000994795,27.9054972476543,8.1471491080253,19.9051152976149,22.492325500597,22.3068367239662,6.8963834770233,10.1156925950728,11.343914177737,12.3577950625286,24.1529571987214,21.3949912875699,30.1719553082327,21.9897865128163,2.80238390812695,5.8622884852024,6.862093842394,5.2606975782618,5.83899223373756,6.96504333044333,3.70407845534298,6.76716507182877,4.21327912387941,6.43369767786788,7.10408748488982,5.38527008592305,3.75241695969754,5.76198596675248,8.99629995223799,8.65762619688577,5.55361606394562,10.6965614585188,11.5357562601836,6.77238985729583,9.2153515951549,10.8350526292203,11.5928397650574,12.1345989563026,9.87975518809728,15.0311189011616,91.8967075225236,35.7079004956117,13.5471701023357,10.5780226665418,5.11891801284562,3.48355007790658,6.31450560478257,5.24377164020691,7.78323153457046,7.98947629672748,10.4396393539793,6.75265714368445,8.54539709920916,9.74886713001639,10.7230247915516,16.178749355776,10.8069024937347,13.1433240347882,8.15571974098251,8.79713547094912,3.38123207019241,6.51684249105006,6.98228953803453,9.8190147846446,11.0031574596208,10.3327103585722,12.0889020437859,14.6842625066943,14.8226313543574,2.33583148002532,4.91397487783007,4.04751802292737,7.30296436998611,7.47649195232492,11.4581633301639,9.49397253587675,6.32327384422638,7.68771956926628,4.31304619582064,8.18710084870708,9.04909252032226,11.36604950762,9.32866550313943,14.473305640901,11.4546977903295,5.68474235311454,4.88894929326078,6.28056817368196,5.86725620721255,6.03022526790537,4.76087281772027,14.6350235893349,9.93101407869003,11.2946991720875,11.4807433433391,13.9283817508377,14.6782234586011,16.3453436197108,16.5870412333199,14.1415477792864,16.2282210096282,6.34654516500885,16.6972613587304,21.4497386463732,2.45902418065013,37.3656972262472,12.9358369960665,13.6653560503823,20.4652227846159,19.1175038362042,19.6062833192507,30.2891887944051,19.4309136803949,21.3346776275258,15.8115111178609,13.4954952897159,5.67760340833074,5.52003371368491,8.1443479676788,10.3931177472697,53.0980553359851,5.82673526771955,7.86041248108353,13.9567759019365,16.832207894204,21.213025208131,14.7304127105886,16.7225515559653,21.746340081468,24.3348303610578,45.3300016872495,33.0033738394198,4.42571487479924,9.36317688962813,8.40831444587904,9.43082954139006,6.56158864476412,6.24290861607247,6.41741180348272,4.87143918583359,3.52007562095566,5.08396970073168,20.2886126210565,10.2229476823718,6.78150592122803,6.87567344180977,6.92359595218192,7.71462228801788,8.74442509889552,20.3967832211561,10.2522528478712,4.12773735926445,5.37064129372164,7.53473828018764,10.66214976224,13.7266903923914,6.62915876976036,6.57771825921193,6.21899882119907,9.54670618015114,4.4287039101359,5.69294507955176,6.80433647177348,7.10900206449194,5.8957892211468,9.44050424693745,12.8112856374271,13.6113089831695,11.5357326229696,14.9121435140862,17.4744810992099,3.43888055901151,4.96375471371293,5.25018208528929,5.29555276258697,4.56181538825101,5.28107573905893,8.33308063001281,13.9462928086195,23.4336597201226,19.8740704317927,24.3328562883697,4.45995473638361,5.85452455839515,7.14564526377873,13.4270021750611,12.715606706001,12.1397404015169,16.8366060979018,17.2652629411332,15.774808977585,20.3668893976418,25.2415911115959,19.0499446447852,25.7129184799452,16.3245876202952,1.55390167361845,3.13998498133165,3.02192309455341,23.1827512838629,9.3841237725591,10.4396425832341,8.1459984050045,12.5393026008841,67.770221114048,64.4455331110048,73.3306257202428,81.973967977939,70.5634995363762,88.381085994595,87.077902529903,84.2100650029292,69.3307885745833,63.6845183454738,9.02949923982337,9.57659696162474,9.39034831647738,7.29320151204882,9.4325923182592,19.1197248788015,14.6682840349066,11.3319281481392,13.4786068028562,13.8983466470089,12.4204856946217,13.9583492625696,14.327150642892,13.3172317002128,14.5886091147258,14.7651044297753,12.051969898265,14.2752823143142,15.6592642305257,13.689499572499,8.22886205724997,13.3106854619503,9.53744759789284,16.5694914960855,12.9870944973156,14.2152541258017,12.6220301282213,10.5227884575137,17.2471224584244,14.5896990631012,15.7784574105152,14.7756723563345,8.18462086339379,14.8739367538527,10.4169569929816,13.4897712086491,11.2287172053796,10.5286816483666,12.6250299165437,11.2501623750953,12.0571274522619
|short_description=p1@Zfp238
|short_description=p1@Zfp238
}}
}}

Revision as of 12:56, 18 April 2012

Short description:p1@Zfp238
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zfp238_5end
Coexpression cluster:NA
Association with transcript: -28bp_to_uc007dul.1_5end
EntrezGene:Zfp238
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Zfp238

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I533.15
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I637.76
CD326+ enterocyte, pool1.CNhs13542.11848-124I328.13
CD326+ enterocyte, pool2.CNhs13197.11849-124I438.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I739.79
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I827.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.86
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.92
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.35
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A623.77
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.14
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D120.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D218.35
GP2+ M cell, pool1.CNhs13228.11845-124H921.25
GP2+ M cell, pool2.CNhs13231.11846-124I120.68
GP2+ M cell, pool3.CNhs13240.11847-124I222.84
Ileum epithelium, pool1.CNhs13199.10252-104B918.81
Ileum epithelium, pool2.CNhs13232.10253-104C114.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G811.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.04
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.89
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A227.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.66
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C311.13
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D535.36
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F529.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D933.02
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D229.89
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F225.02
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D643.20
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F333.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.29
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D94.62
Mouse Schwann, donor2.CNhs12573.11746-123F95.14
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.95
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.15
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.53
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I14.84
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C15.53
adrenal gland, neonate N25.CNhs11223.1377-27I37.54
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G213.27
bone (os femoris), neonate N02.CNhs11227.1985-43F513.26
bone (os femoris), neonate N16.CNhs11225.1525-43A613.47
bone (os femoris), neonate N20.CNhs11195.1350-25C314.06
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B272.90
cerebellum, neonate N30.CNhs11135.1395-42I283.57
colon, adult.CNhs10468.36-18H713.54
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.43
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.77
corpora quadrigemina, adult.CNhs10501.16-22A413.03
corpus striatum, adult.CNhs10487.19-21D836.14
corpus striatum, neonate N00.CNhs11226.630-43F116.34
cortex, adult.CNhs10473.12-14D574.40
cortex, neonate N30.CNhs11107.1392-42F2113.79
diencephalon, adult.CNhs10482.20-12F219.12
diencephalon, neonate N30.CNhs11201.1388-42B227.91
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.15
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.91
epididymis, adult.CNhs10490.58-23B222.49
eyeball, adult.CNhs10484.31-12G422.31
eyeball, embryo E12.CNhs11016.345-16C66.90
eyeball, embryo E14.CNhs10521.399-16E210.12
eyeball, embryo E15.CNhs10593.426-16C911.34
eyeball, embryo E17.CNhs11023.1261-18D412.36
eyeball, neonate N00.CNhs11207.633-15C624.15
eyeball, neonate N01.CNhs11140.1532-43E721.39
eyeball, neonate N02.CNhs11205.1551-44G830.17
eyeball, neonate N16.CNhs11188.777-19A221.99
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H25.86
forelimb, embryo E13.CNhs10589.384-1E26.86
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I66.77
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.43
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E95.39
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I95.76
heart, embryo E14.CNhs10597.403-26D49.00
heart, embryo E15.CNhs11017.431-16C88.66
heart, embryo E16.CNhs11021.457-17C65.55
heart, embryo E17.CNhs11025.479-18E510.70
heart, embryo E18.CNhs11030.1283-20G311.54
heart, neonate N00.CNhs11213.639-21E36.77
heart, neonate N03.CNhs11221.1349-25I29.22
heart, neonate N10.CNhs11118.749-24G110.84
heart, neonate N16.CNhs11209.782-15G111.59
heart, neonate N20.CNhs11127.821-26I612.13
heart, neonate N25.CNhs11196.1351-25D39.88
heart, neonate N30.CNhs11202.1390-42D215.03
hippocampus, adult.CNhs10478.13-16E891.90
hippocampus, neonate N00.CNhs11228.627-43G135.71
intestinal mucosa, adult.CNhs10506.860-29I313.55
intestine, adult.CNhs10496.178-9A310.58
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D86.31
intestine, embryo E16.CNhs10585.463-22H45.24
intestine, embryo E17.CNhs10582.482-18D37.78
intestine, embryo E18.CNhs10526.1289-20F77.99
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E96.75
intestine, neonate N06.CNhs11102.688-20B88.55
intestine, neonate N07.CNhs11095.720-20F29.75
intestine, neonate N10.CNhs11098.755-23A510.72
intestine, neonate N20.CNhs11187.827-18D116.18
intestine, neonate N25.CNhs11121.1352-25E310.81
intestine, neonate N30.CNhs11131.1384-42G113.14
kidney, embryo E14.CNhs10606.411-4I98.16
kidney, embryo E15.CNhs10997.434-16F88.80
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I26.52
kidney, embryo E18.CNhs11001.1288-20C76.98
kidney, neonate N00.CNhs11214.646-21G79.82
kidney, neonate N10.CNhs11206.758-6D511.00
kidney, neonate N20.CNhs11113.832-19I110.33
kidney, neonate N25.CNhs11122.1353-25F312.09
kidney, neonate N30.CNhs11203.1385-42H114.68
liver, adult pregnant day01.CNhs10466.508-5B214.82
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H64.91
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D77.30
liver, embryo E16.CNhs10523.462-17F57.48
liver, embryo E17.CNhs10510.481-18A311.46
liver, embryo E18.CNhs10579.499-43G49.49
liver, neonate N00.CNhs11117.641-24F46.32
liver, neonate N03.CNhs11123.1345-25G27.69
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H28.19
liver, neonate N10.CNhs11115.751-24B99.05
liver, neonate N20.CNhs11220.823-25A311.37
liver, neonate N25.CNhs11198.1368-26H19.33
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B111.45
lung, embryo E12.CNhs10522.354-16G25.68
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C56.28
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A66.03
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C614.64
lung, neonate N06.CNhs11212.683-20E59.93
lung, neonate N07.CNhs11111.715-19A311.29
lung, neonate N10.CNhs11219.750-23E611.48
lung, neonate N20.CNhs11109.822-18A413.93
lung, neonate N25.CNhs11119.1359-25C714.68
lung, neonate N30.CNhs11133.1394-42H216.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B616.23
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C216.70
medulla oblongata, neonate N30.CNhs11200.1396-42A321.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C237.37
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.47
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D719.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.61
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D930.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.33
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.81
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I75.68
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G610.39
pancreas, adult.CNhs10486.34-16E453.10
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E513.96
pancreas, embryo E17.CNhs10599.1558-45G316.83
pancreas, embryo E18.CNhs10580.1535-43I721.21
pancreas, neonate N00.CNhs11105.645-26G914.73
pancreas, neonate N01.CNhs11138.1531-43D716.72
pancreas, neonate N02.CNhs11139.1539-43D821.75
pancreas, neonate N16.CNhs11136.787-43B624.33
pancreas, neonate N25.CNhs11094.1555-45E245.33
pancreas, neonate N30.CNhs11182.1548-44H533.00
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E69.36
pituitary gland, embryo E13.CNhs11009.370-44C78.41
pituitary gland, embryo E14.CNhs11037.398-44A59.43
pituitary gland, embryo E15.CNhs10592.427-16B96.56
pituitary gland, embryo E16.CNhs11036.449-43F66.24
pituitary gland, embryo E17.CNhs11039.1265-44F56.42
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F820.29
skin, adult.CNhs10492.30-1C310.22
skin, neonate N00.CNhs11124.650-25G46.78
skin, neonate N03.CNhs11215.662-22H36.88
skin, neonate N06.CNhs11097.693-20I56.92
skin, neonate N10.CNhs11108.762-6C47.71
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C920.40
spleen, adult.CNhs10465.25-2G210.25
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F25.37
spleen, neonate N10.CNhs11116.752-24D17.53
spleen, neonate N20.CNhs11112.824-19H110.66
spleen, neonate N25.CNhs11099.1354-25G313.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.22
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D46.80
stomach, embryo E17.CNhs11006.1035-18D57.11
stomach, embryo E18.CNhs10999.1286-20C65.90
stomach, neonate N03.CNhs11193.1340-24B89.44
stomach, neonate N07.CNhs11210.718-18A912.81
stomach, neonate N25.CNhs11104.1355-25E413.61
stomach, neonate N30.CNhs11134.1386-42I111.54
submandibular gland, adult.CNhs10469.59-29C114.91
testis, adult.CNhs10504.57-7G517.47
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C54.96
testis, embryo E16.CNhs11033.470-26G55.25
testis, embryo E17.CNhs11029.486-18I55.30
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B75.28
testis, neonate N07.CNhs11222.726-26I48.33
testis, neonate N10.CNhs11204.763-44D913.95
testis, neonate N20.CNhs11110.839-18H323.43
testis, neonate N30.CNhs11130.1391-42E219.87
thymus, adult.CNhs10471.38-12B524.33
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I25.85
thymus, embryo E16.CNhs11002.456-26C57.15
thymus, embryo E17.CNhs10581.478-18C113.43
thymus, embryo E18.CNhs10595.1273-19G412.72
thymus, neonate N02.CNhs11181.1541-43F812.14
thymus, neonate N03.CNhs11137.2104-43C716.84
thymus, neonate N06.CNhs11197.681-26C417.27
thymus, neonate N07.CNhs11211.713-19D315.77
thymus, neonate N10.CNhs11194.748-24E420.37
thymus, neonate N20.CNhs11186.820-7A225.24
thymus, neonate N25.CNhs11125.1362-25G719.05
thymus, neonate N30.CNhs11132.1393-42G225.71
tongue, adult.CNhs10499.32-1B416.32
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E423.18
uterus, adult pregnant day19.CNhs10497.590-15F59.38
uterus, adult.CNhs10509.92-27E510.44
vagina, adult.CNhs10502.89-27D58.15
vesicular gland, adult.CNhs10491.51-27F812.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A167.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A264.45
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A373.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D781.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A470.56
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A588.38
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A687.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A784.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A869.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A963.68
whole body, embryo E11.CNhs11014.324-5I89.03
whole body, embryo E12.CNhs10587.857-27C99.58
whole body, embryo E13.CNhs10512.372-23H29.39
whole body, embryo E14.5.CNhs10578.420-27D27.29
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F219.12
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.48
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.90
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.33
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.05
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.69
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.99
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.62
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G517.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.87
whole body, embryo E17.5.CNhs10513.490-9F910.42
whole body, embryo E17.CNhs10517.475-3I513.49
whole body, embryo E18.CNhs10516.493-3B311.23
whole body, neonate N00.CNhs10525.657-19C210.53
whole body, neonate N01.CNhs10576.659-23C612.63
whole body, neonate N06.CNhs10515.692-21D111.25
whole body, neonate N10.CNhs10518.761-6B412.06





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:179372411..179372509,%2B&oldid=888848"