Personal tools

FFCP PHASE1:Mm9::chr1:75188508..75188571,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Atg9a_5end
|description=CAGE_peak_1_at_Atg9a_5end
|id=chr1:75188508..75188571,-
|id=chr1:75188508..75188571,-
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=20.8193501236232,99.8069665848573,86.9048547234014,72.893874924946,69.6245064625423,20.9849089889862,18.9226238882376,11.879345756625,1.97104211012333,2.34064526321993,0.34243593645101,0.0797721589953364,10.6144452557348,13.8998439846206,14.3237197580735,22.8797052150503,27.9824751251259,5.52058789376916,7.26706498110415,7.63901373236454,25.4279437551699,4.76596565764249,2.87319768052829,39.1981435843846,48.8641768673072,68.9078356938024,37.9070556619986,40.724062977633,62.1376581622343,46.8776041353471,26.3859307679813,16.5107975099504,13.5314253268605,0,5.48818077527422,2.82598897109437,4.90006455029686,90.821363869909,61.7254922173802,58.1111355810916,88.2347232046521,90.8450494994733,85.449822133483,20.8988717839458,19.5657477253663,16.5192076945513,59.461742170451,22.6746162635664,33.6119859583742,25.0814569805826,24.6376102060638,28.7505128729943,4.69791296961662,8.70434570413613,7.73015738027667,23.6678681153071,22.349608315223,30.4246534443691,21.8501777728366,26.4495489636016,21.5502677192101,37.6117430596737,36.4610866405567,32.8463396807711,33.6214563272771,27.7087244828979,32.9560121570245,38.4218305321555,18.8715094401429,19.1708432431001,16.4053469854078,50.845875223877,40.1980744531937,14.8213867050094,14.5685115947719,16.5459381589804,49.5521464497249,50.1811238674788,48.0788449092042,24.6627358055462,23.0548861878072,26.5665818983948,49.136207824243,38.8306200921859,46.4506673241503,38.8909732825241,32.6031149029946,31.1287074528252,12.4190957066422,18.5906037862692,17.971598299504,22.371020801516,28.5587960157255,43.1762553310254,74.7242880064819,67.6520599516977,44.3804367616336,30.5070277414723,16.6263042945836,16.9602995764963,16.0561498545416,15.3991772897181,17.8363667794652,21.3320010945999,3.68034769719064,5.82727690592727,3.0331466700887,41.4487483380188,10.8753911131812,24.9382793628906,17.0015620230813,14.9188084372949,26.5207821844467,18.0867168663147,21.0483785772912,17.2163230121655,42.7647294180467,32.8240540208199,38.0382537338446,28.9562661405862,36.6596920644253,31.0320162006542,33.550517019262,62.6550905604711,87.9676168616511,42.1504141094176,3.59445373517761,4.19931911695385,6.4805815807263,72.9480413901487,57.1875753523283,33.8010207183605,73.5276874413329,76.7146371990992,61.5052611896298,61.1649561765446,16.9053343991525,32.096998417404,11.625246887949,41.4570456096354,13.1421647392331,11.9549094305406,11.7040384373477,19.1395118651358,26.6703076673205,20.6263089658608,24.17504493641,37.2532853864183,11.2095356325078,17.0195472151037,18.8267702855425,17.7548543266336,18.3511184488895,19.1538691587192,20.3724315043864,14.52950147775,3.51106593656617,5.91900186363845,7.672414483681,20.5054514810147,17.5894544985822,17.4660199617184,18.7028341112316,19.0861304794982,19.4376562238097,25.5787339225449,26.2907933371627,31.7601731238701,22.3801395882333,36.9376794177964,63.3958090648592,64.6203944419969,59.0589810132926,75.8266265996101,66.031043849136,27.0639130557518,60.7970560690188,41.78318953284,9.38468302355029,10.4506502337197,13.5310834388198,14.722897297504,19.1245117706588,28.3436182907713,45.0802608467286,23.0578536613615,22.8715040008245,25.2674719492262,22.6158341058179,53.0303451105991,36.5273304288233,45.2050690287414,15.1734320762465,13.9383185383869,14.6520056375005,18.5322708339236,18.8133912552597,20.5497952278633,23.2078091246024,33.2122832954105,35.9527086756748,38.0063264879146,55.733093892384,23.1914696945371,27.3217003207352,24.5099702499491,33.2690599077145,42.4471801164254,34.1198641387103,43.7298128925232,76.8520974913668,24.7105271869273,20.1275489138296,33.8648262378338,29.6435789458833,38.1394105700139,43.5935714858247,64.6474318626912,23.833161531492,13.0749074121634,14.8298128562244,10.1847051465113,15.0201758904641,18.0906758037161,25.2326259339175,32.1970518965368,20.4925687338048,25.0255099303116,19.4534817762134,23.760180633782,26.7661721892138,29.6530570092099,24.1266054302836,32.6343410291226,25.0799779239708,20.4193192265502,52.500042926008,69.5065301491765,15.4098848654075,131.03241121907,18.2994767261429,18.7410597262386,20.6806461823487,20.3123478259669,19.6062833192507,23.4953520554731,19.8357243820698,18.9966307642353,23.3219788988449,48.5195187796929,21.5748929516568,21.9020692510724,25.2474786998043,21.1161757404845,47.7882498023866,11.6534705354391,14.8138542912728,13.013750503157,29.825491180958,30.1286444985049,21.4495483329624,19.2672876623078,15.329387270543,35.0800801308756,33.7339547439996,34.0347292719017,22.8094535855038,10.8036656418786,20.0505959863269,22.5053886783172,18.4433842987965,20.6907828418402,22.7077648430927,43.5384877233877,12.2029288193129,22.2423674407011,13.2317038832977,24.2382791823976,35.0377805930115,19.722326451507,21.1289048885552,19.6969079694074,34.3947387223224,60.8194990594472,26.9975991660607,21.0514605322487,20.556592538038,32.2110061478022,27.7489282273681,23.7929300134784,8.15896463970505,9.51669875800874,11.0559979043539,15.2747298882418,15.6586316822662,15.4522795016405,13.608672943547,13.381650944926,11.7915784422936,14.9699424487151,21.9858192229394,20.6787194167383,33.0518181894072,16.776161453347,2.81846469342095,13.4564891439581,16.2149320647956,17.6950581393083,16.790777052105,16.2197880471147,18.4250864673834,13.9318691783027,10.8005124758482,5.55643477899814,22.4663404881135,19.2766783583189,11.5553372715394,8.52500944468066,7.14564526377873,10.7416017400489,10.1327490938445,11.538763153917,10.6336459565696,9.59181274507402,13.793432004555,12.4016207718314,10.7203668813728,13.4696578296461,19.1678119577773,52.601448998729,7.76950836809226,4.57540668708326,7.72269235274761,26.6601639764423,21.2081197259836,20.8792851664682,21.0081011497485,13.0408747049194,49.1334103076848,58.0009797999043,46.4045365885911,46.5722124151393,57.546931660734,64.2084812781245,58.0519350199353,54.4888655901307,49.3925225792783,46.080667745912,5.08558003162466,24.3405172774629,20.4880326904961,22.6089246873513,9.22297915563122,10.2952364732008,19.1132185909389,16.8948746935893,23.1061830906107,22.7427490587418,18.7574681918777,19.6171395041519,15.1699242101209,20.6160990743679,23.0890585201565,21.4332161077383,19.1209137809012,20.8341958100801,15.2471783297223,17.2222736557245,17.8292011240416,22.5394273822359,15.9752247264705,17.8776092457764,18.6336573222355,18.1921406967104,19.2074371516411,19.2040889349625,20.642225304571,16.8342681497322,20.0493180629854,18.4203382042304,18.415396942636,22.1559682895931,24.499139594605,31.7259433981191,35.3236728752567,33.7347554855828,43.0398747154898,39.0446811841542,32.6933648224794
|phase1_expression=20.8193501236232,99.8069665848573,86.9048547234014,72.893874924946,69.6245064625423,20.9849089889862,18.9226238882376,11.879345756625,1.97104211012333,2.34064526321993,0.34243593645101,0.0797721589953364,10.6144452557348,13.8998439846206,14.3237197580735,22.8797052150503,27.9824751251259,5.52058789376916,7.26706498110415,7.63901373236454,25.4279437551699,4.76596565764249,2.87319768052829,39.1981435843846,48.8641768673072,68.9078356938024,37.9070556619986,40.724062977633,62.1376581622343,46.8776041353471,26.3859307679813,16.5107975099504,13.5314253268605,0,5.48818077527422,2.82598897109437,4.90006455029686,90.821363869909,61.7254922173802,58.1111355810916,88.2347232046521,90.8450494994733,85.449822133483,20.8988717839458,19.5657477253663,16.5192076945513,59.461742170451,22.6746162635664,33.6119859583742,25.0814569805826,24.6376102060638,28.7505128729943,4.69791296961662,8.70434570413613,7.73015738027667,23.6678681153071,22.349608315223,30.4246534443691,21.8501777728366,26.4495489636016,21.5502677192101,37.6117430596737,36.4610866405567,32.8463396807711,33.6214563272771,27.7087244828979,32.9560121570245,38.4218305321555,18.8715094401429,19.1708432431001,16.4053469854078,50.845875223877,40.1980744531937,14.8213867050094,14.5685115947719,16.5459381589804,49.5521464497249,50.1811238674788,48.0788449092042,24.6627358055462,23.0548861878072,26.5665818983948,49.136207824243,38.8306200921859,46.4506673241503,38.8909732825241,32.6031149029946,31.1287074528252,12.4190957066422,18.5906037862692,17.971598299504,22.371020801516,28.5587960157255,43.1762553310254,74.7242880064819,67.6520599516977,44.3804367616336,30.5070277414723,16.6263042945836,16.9602995764963,16.0561498545416,15.3991772897181,17.8363667794652,21.3320010945999,3.68034769719064,5.82727690592727,3.0331466700887,41.4487483380188,10.8753911131812,24.9382793628906,17.0015620230813,14.9188084372949,26.5207821844467,18.0867168663147,21.0483785772912,17.2163230121655,42.7647294180467,32.8240540208199,38.0382537338446,28.9562661405862,36.6596920644253,31.0320162006542,33.550517019262,62.6550905604711,87.9676168616511,42.1504141094176,3.59445373517761,4.19931911695385,6.4805815807263,72.9480413901487,57.1875753523283,33.8010207183605,73.5276874413329,76.7146371990992,61.5052611896298,61.1649561765446,16.9053343991525,32.096998417404,11.625246887949,41.4570456096354,13.1421647392331,11.9549094305406,11.7040384373477,19.1395118651358,26.6703076673205,20.6263089658608,24.17504493641,37.2532853864183,11.2095356325078,17.0195472151037,18.8267702855425,17.7548543266336,18.3511184488895,19.1538691587192,20.3724315043864,14.52950147775,3.51106593656617,5.91900186363845,7.672414483681,20.5054514810147,17.5894544985822,17.4660199617184,18.7028341112316,19.0861304794982,19.4376562238097,25.5787339225449,26.2907933371627,31.7601731238701,22.3801395882333,36.9376794177964,63.3958090648592,64.6203944419969,59.0589810132926,75.8266265996101,66.031043849136,27.0639130557518,60.7970560690188,41.78318953284,9.38468302355029,10.4506502337197,13.5310834388198,14.722897297504,19.1245117706588,28.3436182907713,45.0802608467286,23.0578536613615,22.8715040008245,25.2674719492262,22.6158341058179,53.0303451105991,36.5273304288233,45.2050690287414,15.1734320762465,13.9383185383869,14.6520056375005,18.5322708339236,18.8133912552597,20.5497952278633,23.2078091246024,33.2122832954105,35.9527086756748,38.0063264879146,55.733093892384,23.1914696945371,27.3217003207352,24.5099702499491,33.2690599077145,42.4471801164254,34.1198641387103,43.7298128925232,76.8520974913668,24.7105271869273,20.1275489138296,33.8648262378338,29.6435789458833,38.1394105700139,43.5935714858247,64.6474318626912,23.833161531492,13.0749074121634,14.8298128562244,10.1847051465113,15.0201758904641,18.0906758037161,25.2326259339175,32.1970518965368,20.4925687338048,25.0255099303116,19.4534817762134,23.760180633782,26.7661721892138,29.6530570092099,24.1266054302836,32.6343410291226,25.0799779239708,20.4193192265502,52.500042926008,69.5065301491765,15.4098848654075,131.03241121907,18.2994767261429,18.7410597262386,20.6806461823487,20.3123478259669,19.6062833192507,23.4953520554731,19.8357243820698,18.9966307642353,23.3219788988449,48.5195187796929,21.5748929516568,21.9020692510724,25.2474786998043,21.1161757404845,47.7882498023866,11.6534705354391,14.8138542912728,13.013750503157,29.825491180958,30.1286444985049,21.4495483329624,19.2672876623078,15.329387270543,35.0800801308756,33.7339547439996,34.0347292719017,22.8094535855038,10.8036656418786,20.0505959863269,22.5053886783172,18.4433842987965,20.6907828418402,22.7077648430927,43.5384877233877,12.2029288193129,22.2423674407011,13.2317038832977,24.2382791823976,35.0377805930115,19.722326451507,21.1289048885552,19.6969079694074,34.3947387223224,60.8194990594472,26.9975991660607,21.0514605322487,20.556592538038,32.2110061478022,27.7489282273681,23.7929300134784,8.15896463970505,9.51669875800874,11.0559979043539,15.2747298882418,15.6586316822662,15.4522795016405,13.608672943547,13.381650944926,11.7915784422936,14.9699424487151,21.9858192229394,20.6787194167383,33.0518181894072,16.776161453347,2.81846469342095,13.4564891439581,16.2149320647956,17.6950581393083,16.790777052105,16.2197880471147,18.4250864673834,13.9318691783027,10.8005124758482,5.55643477899814,22.4663404881135,19.2766783583189,11.5553372715394,8.52500944468066,7.14564526377873,10.7416017400489,10.1327490938445,11.538763153917,10.6336459565696,9.59181274507402,13.793432004555,12.4016207718314,10.7203668813728,13.4696578296461,19.1678119577773,52.601448998729,7.76950836809226,4.57540668708326,7.72269235274761,26.6601639764423,21.2081197259836,20.8792851664682,21.0081011497485,13.0408747049194,49.1334103076848,58.0009797999043,46.4045365885911,46.5722124151393,57.546931660734,64.2084812781245,58.0519350199353,54.4888655901307,49.3925225792783,46.080667745912,5.08558003162466,24.3405172774629,20.4880326904961,22.6089246873513,9.22297915563122,10.2952364732008,19.1132185909389,16.8948746935893,23.1061830906107,22.7427490587418,18.7574681918777,19.6171395041519,15.1699242101209,20.6160990743679,23.0890585201565,21.4332161077383,19.1209137809012,20.8341958100801,15.2471783297223,17.2222736557245,17.8292011240416,22.5394273822359,15.9752247264705,17.8776092457764,18.6336573222355,18.1921406967104,19.2074371516411,19.2040889349625,20.642225304571,16.8342681497322,20.0493180629854,18.4203382042304,18.415396942636,22.1559682895931,24.499139594605,31.7259433981191,35.3236728752567,33.7347554855828,43.0398747154898,39.0446811841542,32.6933648224794
|short_description=p1@Atg9a
|short_description=p1@Atg9a
}}
}}

Revision as of 14:57, 18 April 2012

Short description:p1@Atg9a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Atg9a_5end
Coexpression cluster:NA
Association with transcript: -11bp_to_ENSMUST00000040689, NM_001003917, uc007bob.1_5end
EntrezGene:Atg9a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Atg9a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I599.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I686.90
CD326+ enterocyte, pool1.CNhs13542.11848-124I372.89
CD326+ enterocyte, pool2.CNhs13197.11849-124I469.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I720.98
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.92
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.61
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.90
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A114.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A322.88
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A527.98
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A325.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D139.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D248.86
GP2+ M cell, pool1.CNhs13228.11845-124H968.91
GP2+ M cell, pool2.CNhs13231.11846-124I137.91
GP2+ M cell, pool3.CNhs13240.11847-124I240.72
Ileum epithelium, pool1.CNhs13199.10252-104B962.14
Ileum epithelium, pool2.CNhs13232.10253-104C146.88
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C826.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I316.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G613.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G890.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H161.73
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H358.11
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G988.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H290.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H485.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D820.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.57
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.52
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B759.46
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C222.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B833.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C325.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C424.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C428.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C123.67
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E122.35
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C530.42
Mouse Granule cells, donor1.CNhs12131.11713-123C321.85
Mouse Granule cells, donor2.CNhs12357.11731-123E326.45
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C637.61
Mouse Meningeal cells, donor3.CNhs12109.11639-122D136.46
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C732.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E733.62
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D227.71
Mouse Microglia, donor1.CNhs12629.11718-123C832.96
Mouse Microglia, donor2.CNhs12634.11736-123E838.42
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.17
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D916.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F150.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D540.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D349.55
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F350.18
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D748.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F423.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.57
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E449.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E538.83
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I646.45
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D638.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F632.60
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.13
Mouse Schwann, donor1.CNhs12507.11728-123D912.42
Mouse Schwann, donor2.CNhs12573.11746-123F918.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C428.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C843.18
Mouse hepatocyte, donor6.CNhs13090.11822-124F474.72
Mouse hepatocyte, donor8.CNhs13091.11824-124F667.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A744.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I730.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.96
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B641.45
accessory axillary lymph node, adult.CNhs10475.1063-29H910.88
adrenal gland, adult.CNhs10508.49-24D724.94
adrenal gland, embryo E14.CNhs11038.406-44C517.00
adrenal gland, embryo E16.CNhs11004.1254-43D614.92
adrenal gland, embryo E17.CNhs11043.1263-45I126.52
adrenal gland, embryo E18.CNhs11026.1262-18F518.09
adrenal gland, neonate N00.CNhs11191.1311-23C121.05
adrenal gland, neonate N25.CNhs11223.1377-27I317.22
amnion, adult pregnant day17.5.CNhs10488.583-22A842.76
aorta, adult.CNhs10498.46-23H132.82
bone (os femoris), adult.CNhs10483.56-12G238.04
bone (os femoris), neonate N02.CNhs11227.1985-43F528.96
bone (os femoris), neonate N16.CNhs11225.1525-43A636.66
bone (os femoris), neonate N20.CNhs11195.1350-25C331.03
cecum, adult.CNhs10467.37-13H433.55
cerebellum, adult.CNhs10494.15-8B262.66
cerebellum, neonate N30.CNhs11135.1395-42I287.97
colon, adult.CNhs10468.36-18H742.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.48
corpora quadrigemina, adult.CNhs10501.16-22A472.95
corpus striatum, adult.CNhs10487.19-21D857.19
corpus striatum, neonate N00.CNhs11226.630-43F133.80
cortex, adult.CNhs10473.12-14D573.53
cortex, neonate N30.CNhs11107.1392-42F276.71
diencephalon, adult.CNhs10482.20-12F261.51
diencephalon, neonate N30.CNhs11201.1388-42B261.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.91
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A232.10
epididymis, adult.CNhs10490.58-23B211.63
eyeball, adult.CNhs10484.31-12G441.46
eyeball, embryo E12.CNhs11016.345-16C613.14
eyeball, embryo E14.CNhs10521.399-16E211.95
eyeball, embryo E15.CNhs10593.426-16C911.70
eyeball, embryo E17.CNhs11023.1261-18D419.14
eyeball, neonate N00.CNhs11207.633-15C626.67
eyeball, neonate N01.CNhs11140.1532-43E720.63
eyeball, neonate N02.CNhs11205.1551-44G824.18
eyeball, neonate N16.CNhs11188.777-19A237.25
forelimb, embryo E11.CNhs10596.335-25E211.21
forelimb, embryo E12.CNhs10600.359-14H217.02
forelimb, embryo E13.CNhs10589.384-1E218.83
forelimb, embryo E14.CNhs10577.413-26A817.75
forelimb, embryo E15.CNhs11007.437-20E718.35
forelimb, embryo E17.CNhs10598.1517-43C419.15
forelimb, embryo E18.CNhs11008.1520-43B520.37
gonad, embryo E13.CNhs11044.1564-45I614.53
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.92
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.67
heart, embryo E11.CNhs10586.331-24E920.51
heart, embryo E12.CNhs11015.353-12F517.59
heart, embryo E13.CNhs11013.376-3I917.47
heart, embryo E14.CNhs10597.403-26D418.70
heart, embryo E15.CNhs11017.431-16C819.09
heart, embryo E16.CNhs11021.457-17C619.44
heart, embryo E17.CNhs11025.479-18E525.58
heart, embryo E18.CNhs11030.1283-20G326.29
heart, neonate N00.CNhs11213.639-21E331.76
heart, neonate N03.CNhs11221.1349-25I222.38
heart, neonate N10.CNhs11118.749-24G136.94
heart, neonate N16.CNhs11209.782-15G163.40
heart, neonate N20.CNhs11127.821-26I664.62
heart, neonate N25.CNhs11196.1351-25D359.06
heart, neonate N30.CNhs11202.1390-42D275.83
hippocampus, adult.CNhs10478.13-16E866.03
hippocampus, neonate N00.CNhs11228.627-43G127.06
intestinal mucosa, adult.CNhs10506.860-29I360.80
intestine, adult.CNhs10496.178-9A341.78
intestine, embryo E12.CNhs11019.1251-16I59.38
intestine, embryo E13.CNhs11010.381-16D510.45
intestine, embryo E15.CNhs10602.976-16D813.53
intestine, embryo E16.CNhs10585.463-22H414.72
intestine, embryo E17.CNhs10582.482-18D319.12
intestine, embryo E18.CNhs10526.1289-20F728.34
intestine, neonate N00.CNhs11126.644-26D145.08
intestine, neonate N01.CNhs11192.1322-23E923.06
intestine, neonate N06.CNhs11102.688-20B822.87
intestine, neonate N07.CNhs11095.720-20F225.27
intestine, neonate N10.CNhs11098.755-23A522.62
intestine, neonate N20.CNhs11187.827-18D153.03
intestine, neonate N25.CNhs11121.1352-25E336.53
intestine, neonate N30.CNhs11131.1384-42G145.21
kidney, embryo E14.CNhs10606.411-4I915.17
kidney, embryo E15.CNhs10997.434-16F813.94
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I218.53
kidney, embryo E18.CNhs11001.1288-20C718.81
kidney, neonate N00.CNhs11214.646-21G720.55
kidney, neonate N10.CNhs11206.758-6D523.21
kidney, neonate N20.CNhs11113.832-19I133.21
kidney, neonate N25.CNhs11122.1353-25F335.95
kidney, neonate N30.CNhs11203.1385-42H138.01
liver, adult pregnant day01.CNhs10466.508-5B255.73
liver, embryo E12.CNhs10601.355-15F823.19
liver, embryo E13.CNhs10524.378-3H627.32
liver, embryo E14.CNhs10594.409-16E124.51
liver, embryo E15.CNhs10520.433-16D733.27
liver, embryo E16.CNhs10523.462-17F542.45
liver, embryo E17.CNhs10510.481-18A334.12
liver, embryo E18.CNhs10579.499-43G443.73
liver, neonate N00.CNhs11117.641-24F476.85
liver, neonate N03.CNhs11123.1345-25G224.71
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H233.86
liver, neonate N10.CNhs11115.751-24B929.64
liver, neonate N20.CNhs11220.823-25A338.14
liver, neonate N25.CNhs11198.1368-26H143.59
liver, neonate N30.CNhs11106.1382-42D164.65
lung, adult.CNhs10474.28-22B123.83
lung, embryo E12.CNhs10522.354-16G213.07
lung, embryo E14.CNhs10604.404-26F814.83
lung, embryo E15.CNhs11020.432-17C510.18
lung, embryo E16.CNhs10998.458-17B615.02
lung, embryo E17.CNhs10605.480-44A618.09
lung, embryo E18.CNhs10583.1287-20I625.23
lung, neonate N00.CNhs11224.640-42C632.20
lung, neonate N06.CNhs11212.683-20E520.49
lung, neonate N07.CNhs11111.715-19A325.03
lung, neonate N10.CNhs11219.750-23E619.45
lung, neonate N20.CNhs11109.822-18A423.76
lung, neonate N25.CNhs11119.1359-25C726.77
lung, neonate N30.CNhs11133.1394-42H229.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A132.63
mammary gland, adult lactating day02.CNhs10480.595-22B625.08
mammary gland, adult pregnant day19.CNhs10476.588-5H220.42
medulla oblongata, adult.CNhs10477.17-12C252.50
medulla oblongata, neonate N30.CNhs11200.1396-42A369.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.41
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2131.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.74
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.31
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.61
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D923.50
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D623.32
olfactory brain, adult.CNhs10489.18-22I948.52
ovary, adult.CNhs10507.91-2I721.57
ovary, embryo E18.CNhs11040.505-44H721.90
ovary, neonate N00.CNhs11217.1299-22I425.25
oviduct, adult pregnant day01.CNhs10500.988-6G621.12
pancreas, adult.CNhs10486.34-16E447.79
pancreas, embryo E14.CNhs11012.405-44F411.65
pancreas, embryo E15.CNhs11042.1556-45F214.81
pancreas, embryo E16.CNhs11003.460-26E513.01
pancreas, embryo E17.CNhs10599.1558-45G329.83
pancreas, embryo E18.CNhs10580.1535-43I730.13
pancreas, neonate N00.CNhs11105.645-26G921.45
pancreas, neonate N01.CNhs11138.1531-43D719.27
pancreas, neonate N02.CNhs11139.1539-43D815.33
pancreas, neonate N16.CNhs11136.787-43B635.08
pancreas, neonate N25.CNhs11094.1555-45E233.73
pancreas, neonate N30.CNhs11182.1548-44H534.03
pituitary gland, adult.CNhs10493.21-1G822.81
pituitary gland, embryo E12.CNhs11018.346-16E610.80
pituitary gland, embryo E13.CNhs11009.370-44C720.05
pituitary gland, embryo E14.CNhs11037.398-44A522.51
pituitary gland, embryo E15.CNhs10592.427-16B918.44
pituitary gland, embryo E16.CNhs11036.449-43F620.69
pituitary gland, embryo E17.CNhs11039.1265-44F522.71
pituitary gland, neonate N00.CNhs11190.1308-22E943.54
placenta, adult pregnant day10.CNhs10472.539-13I712.20
placenta, adult pregnant day17.CNhs10464.577-18G322.24
prostate, adult.CNhs10470.859-1F813.23
skin, adult.CNhs10492.30-1C324.24
skin, neonate N00.CNhs11124.650-25G435.04
skin, neonate N03.CNhs11215.662-22H319.72
skin, neonate N06.CNhs11097.693-20I521.13
skin, neonate N10.CNhs11108.762-6C419.70
small intestine, neonate N16.CNhs11114.790-21I134.39
spinal cord, adult.CNhs10505.24-13C960.82
spleen, adult.CNhs10465.25-2G227.00
spleen, embryo E16.CNhs11035.461-43C121.05
spleen, embryo E18.CNhs11011.1271-21F220.56
spleen, neonate N10.CNhs11116.752-24D132.21
spleen, neonate N20.CNhs11112.824-19H127.75
spleen, neonate N25.CNhs11099.1354-25G323.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.06
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E315.66
stomach, embryo E15.CNhs10603.1252-16G815.45
stomach, embryo E16.CNhs11022.459-17D413.61
stomach, embryo E17.CNhs11006.1035-18D513.38
stomach, embryo E18.CNhs10999.1286-20C611.79
stomach, neonate N03.CNhs11193.1340-24B814.97
stomach, neonate N07.CNhs11210.718-18A921.99
stomach, neonate N25.CNhs11104.1355-25E420.68
stomach, neonate N30.CNhs11134.1386-42I133.05
submandibular gland, adult.CNhs10469.59-29C116.78
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F513.46
testis, embryo E15.CNhs11034.443-27C516.21
testis, embryo E16.CNhs11033.470-26G517.70
testis, embryo E17.CNhs11029.486-18I516.79
testis, embryo E18.CNhs11027.503-18G516.22
testis, neonate N00.CNhs11189.1300-22B718.43
testis, neonate N07.CNhs11222.726-26I413.93
testis, neonate N10.CNhs11204.763-44D910.80
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E222.47
thymus, adult.CNhs10471.38-12B519.28
thymus, embryo E14.CNhs11041.402-44I411.56
thymus, embryo E15.CNhs11005.430-45I28.53
thymus, embryo E16.CNhs11002.456-26C57.15
thymus, embryo E17.CNhs10581.478-18C110.74
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F811.54
thymus, neonate N03.CNhs11137.2104-43C710.63
thymus, neonate N06.CNhs11197.681-26C49.59
thymus, neonate N07.CNhs11211.713-19D313.79
thymus, neonate N10.CNhs11194.748-24E412.40
thymus, neonate N20.CNhs11186.820-7A210.72
thymus, neonate N25.CNhs11125.1362-25G713.47
thymus, neonate N30.CNhs11132.1393-42G219.17
tongue, adult.CNhs10499.32-1B452.60
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.58
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.72
urinary bladder, adult.CNhs10481.879-12E426.66
uterus, adult pregnant day19.CNhs10497.590-15F521.21
uterus, adult.CNhs10509.92-27E520.88
vagina, adult.CNhs10502.89-27D521.01
vesicular gland, adult.CNhs10491.51-27F813.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A149.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A258.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A346.40
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D746.57
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A457.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A564.21
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A658.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A754.49
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A849.39
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A946.08
whole body, embryo E11.CNhs11014.324-5I85.09
whole body, embryo E12.CNhs10587.857-27C924.34
whole body, embryo E13.CNhs10512.372-23H220.49
whole body, embryo E14.5.CNhs10578.420-27D222.61
whole body, embryo E14.CNhs10519.395-14B19.22
whole body, embryo E16.CNhs10514.453-14F210.30
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.74
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.17
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G523.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.83
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.54
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.98
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.19
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G519.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.64
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.05
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.42
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.16
whole body, embryo E17.5.CNhs10513.490-9F924.50
whole body, embryo E17.CNhs10517.475-3I531.73
whole body, embryo E18.CNhs10516.493-3B335.32
whole body, neonate N00.CNhs10525.657-19C233.73
whole body, neonate N01.CNhs10576.659-23C643.04
whole body, neonate N06.CNhs10515.692-21D139.04
whole body, neonate N10.CNhs10518.761-6B432.69





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:75188508..75188571,-&oldid=899150"