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FFCP PHASE1:Mm9::chr5:91360235..91360337,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:91360235..91360337,+
|short_description=p1@Mthfd2l
|description=CAGE_peak_1_at_Mthfd2l_5end
|association_with_transcript=13bp_to_ENSMUST00000071652,NM_026788,uc008ybo.1,uc008ybp.1_5end
|EntrezGene=665563
|EntrezGene=665563
|HGNC=
|HGNC=
|UniProt=D3YZG8
|UniProt=D3YZG8
|association_with_transcript=13bp_to_ENSMUST00000071652,NM_026788,uc008ybo.1,uc008ybp.1_5end
|description=CAGE_peak_1_at_Mthfd2l_5end
|id=chr5:91360235..91360337,+
|ontology_enrichment_disease=
|phase1_expression=20.0186058880992,9.42233600626275,13.1949779422965,8.16653370528441,13.5241847085514,16.6200479192771,18.221785966451,1.29123323441576,1.12630977721333,0.468129052643987,2.22583358693156,0.398860794976682,5.30722262786738,0.961624426608971,7.99463428357591,7.49158489342356,4.19737126876888,5.52058789376916,5.21034847701807,4.66828616977833,9.95006494767516,14.9929336313337,18.5451850288644,11.1994695955385,13.3057383018959,17.8011908875656,16.7997178502039,12.9282739611533,23.372880593134,19.6583501212746,24.8338171933941,0.635030673459631,0,0,29.7517168343813,33.08069442634,31.0337421518801,1.25559489221072,1.5626706890476,3.14114246384279,2.35292595212406,1.36609096991689,1.94204141212461,18.758625878361,18.3492245507321,19.0888622248149,19.559783608701,35.3200753336323,22.4079906389161,21.3872888981712,16.3784113301674,25.8754615856949,3.35565212115473,4.35217285206807,5.71359458542189,15.4355661621568,12.3209379173665,10.3134418455488,30.9544185115185,19.0436752537932,34.2268957893337,20.3306719241479,16.0073063300005,22.0475430733943,27.6882581518753,26.9982443679518,13.4820049733282,19.2109152660777,35.5655370218078,30.9163598779572,36.3862183137891,35.4207220660716,22.9703282589678,26.70299422886,25.3990498198326,24.8189072384706,23.1243350098716,13.1517958227743,18.1255709242367,24.0033043668953,16.2848005612289,20.8365348222704,20.1011759280994,20.2594539611405,14.515833538797,34.7661730858928,31.6065131374009,40.0758808524396,40.3620610465871,18.666175346376,24.9283460283443,22.371020801516,7.47968467078526,10.2543606411185,11.695975514058,7.6164570806547,12.7804422319894,19.9403477416328,22.0818103912438,27.2071472372962,30.9855523508697,14.115912515575,35.6727335589304,42.6640021891999,16.8863011988747,16.2150313904063,18.704404465547,12.3318590096585,5.95557132388495,13.0629082377046,10.4091196059682,11.5696881758614,8.99400439298628,10.399862198131,10.1126288136706,16.9649898295062,2.47194967734374,15.6167305473505,7.07688441559899,15.5296175949513,11.0420759230197,12.6067565815158,13.0474232852686,6.14839673724249,6.91174132484402,14.8165092020983,13.1796636956512,16.7972764678154,10.4197586199913,20.2217363196511,14.640019290196,19.0994615211554,11.4724051326902,7.41574826257959,14.5451631191692,10.5456820994042,19.8586759508117,15.1776504144313,57.6207889228778,30.5140691035387,23.291559290324,27.3583504275833,23.4080768746954,24.5648853072216,24.8333221902347,24.5978342946912,29.0475346135159,12.1590584247337,20.0478233427543,21.3689870589636,19.7065259063623,20.3852031157645,17.2389294519871,14.9748431604532,18.7261744131229,19.7043924150308,9.83098462238529,9.26452465612975,7.10408748488982,17.1914391204467,15.2441938987713,15.6653993471083,15.1516630774535,16.9217239302767,17.4321837562737,18.1376476905318,14.4867636755794,16.9309746432396,18.5952630402233,15.2675741593559,15.4841426232584,11.4035990191759,11.8557062257167,14.3600868073598,10.3042074796422,13.9950272835827,4.95628174475697,5.81791246659797,16.6364835417482,18.1144604051142,18.0414445850931,16.3363654944907,12.8979265430025,15.5985013412299,11.8632265386128,10.2113351928887,10.304743560811,13.5290400987983,12.8676297498619,8.08937467788799,12.1037307929829,9.55878111620963,23.8981555200883,19.1937501184344,21.4144697778853,20.9760867680674,15.9041039477453,19.4977579295086,19.7297995827683,16.9751670176542,16.7988638790271,20.4839292110189,6.81841042300442,7.84171996865642,7.86235980452812,5.39669069723649,7.50582449137461,8.68237775108701,6.11102044275408,7.76779571117189,5.18832725680113,5.49122826376163,7.18841032636773,9.67566463938109,11.8574315783533,10.6083128737787,5.20252499213545,5.30687873499704,14.4107488329952,20.0860896476714,20.5335870316953,19.6904299499218,17.3670783733492,19.4307258632506,16.1869675802489,15.6106918286239,18.128041572212,15.9454576547118,18.975117470241,14.5838350097007,14.850908440467,12.5844680965915,3.01582567878545,10.3342079925555,12.7858710984949,16.8321415245887,20.7110261084252,17.3473296156461,13.114795630134,12.876017287423,28.7112479668794,19.9123759591286,27.7896183075311,22.4630670075399,22.057068734157,24.0615051170508,28.3367491172426,27.4720506436633,27.6701444562566,12.2102100240287,15.1875891172847,16.3820355373875,18.4062264069541,15.6721616823909,7.96470830039777,14.0812768969889,12.9999129494843,7.54420319023592,6.79194353625777,11.0676653259814,13.6966995379157,15.2684166380552,12.83390562185,10.4292130118819,6.32511651449993,10.3135543248187,24.5116516142727,32.0508747375732,19.2744438836304,24.4344219936015,19.6847659342924,16.2315624017884,20.404078554663,13.700922710157,1.17335854031855,2.1183207086382,16.0985730580122,10.3878339353132,17.7610869365496,15.6210475563924,11.9372344003136,12.6388492803697,11.659233465194,25.2178410734293,6.4930934703184,11.3512777379772,10.5560880600736,6.02779062415011,3.55404992074665,7.54967971581525,16.9978429993855,15.6745626602497,16.1693969351176,18.1387417422872,19.6128316020304,19.5186688441775,17.2808545314882,17.1452402731864,15.0670168984863,15.9139928734088,16.4480376893418,13.0877970992015,14.2576470620972,31.6883049674332,0.56369293868419,8.97099276263873,10.7548018797113,11.6670713006429,8.65370817300798,10.644235905919,13.6134396829075,14.3224823328345,7.02557607652263,1.93267296660805,5.18454011264158,7.58426689507628,9.93353554921804,9.24398614483445,7.01572444080093,7.16106782669926,7.15252877212554,5.88957702647847,7.97523446742717,7.87538309595551,8.68757595866998,8.87270429204197,7.40679893622118,4.81059208201647,8.88264456579924,12.4701710988366,3.32978930061097,0.986852422704233,0.671538465456314,18.1598218390259,7.13193406714492,11.1722490803032,15.6488916727718,14.0440189129902,7.90652579663893,7.36520378411483,6.30185064783336,10.1393377582776,8.90607275701835,9.06472676867641,10.8003600037089,7.20513925158753,9.06284817968409,10.8729665467882,23.2483658588556,28.3307660114732,18.7806966329548,15.3157231753025,15.5113740344707,14.5236371675511,14.8905307627082,13.8043488350059,17.329637317958,18.9522908822848,16.2226751929753,15.4673599936582,18.4473769715668,17.4148414541244,18.4367855347519,20.9569224164552,17.8461861955077,17.1689206212697,19.3680373377554,17.6638704161277,16.8005933668854,16.6827257789777,19.7902037656276,15.2613737463945,17.4102353768362,15.9075462836352,16.4635175585495,17.3626009548976,14.2594319538155,17.3954104213899,18.2697927911228,17.829311309977,21.6892452879935,17.9726735775721,16.397061933397,13.989392364525,12.1644436391612,15.4707158914775,12.242453252406,15.8825821766051,18.3175590140133
|phase1_expression=20.0186058880992,9.42233600626275,13.1949779422965,8.16653370528441,13.5241847085514,16.6200479192771,18.221785966451,1.29123323441576,1.12630977721333,0.468129052643987,2.22583358693156,0.398860794976682,5.30722262786738,0.961624426608971,7.99463428357591,7.49158489342356,4.19737126876888,5.52058789376916,5.21034847701807,4.66828616977833,9.95006494767516,14.9929336313337,18.5451850288644,11.1994695955385,13.3057383018959,17.8011908875656,16.7997178502039,12.9282739611533,23.372880593134,19.6583501212746,24.8338171933941,0.635030673459631,0,0,29.7517168343813,33.08069442634,31.0337421518801,1.25559489221072,1.5626706890476,3.14114246384279,2.35292595212406,1.36609096991689,1.94204141212461,18.758625878361,18.3492245507321,19.0888622248149,19.559783608701,35.3200753336323,22.4079906389161,21.3872888981712,16.3784113301674,25.8754615856949,3.35565212115473,4.35217285206807,5.71359458542189,15.4355661621568,12.3209379173665,10.3134418455488,30.9544185115185,19.0436752537932,34.2268957893337,20.3306719241479,16.0073063300005,22.0475430733943,27.6882581518753,26.9982443679518,13.4820049733282,19.2109152660777,35.5655370218078,30.9163598779572,36.3862183137891,35.4207220660716,22.9703282589678,26.70299422886,25.3990498198326,24.8189072384706,23.1243350098716,13.1517958227743,18.1255709242367,24.0033043668953,16.2848005612289,20.8365348222704,20.1011759280994,20.2594539611405,14.515833538797,34.7661730858928,31.6065131374009,40.0758808524396,40.3620610465871,18.666175346376,24.9283460283443,22.371020801516,7.47968467078526,10.2543606411185,11.695975514058,7.6164570806547,12.7804422319894,19.9403477416328,22.0818103912438,27.2071472372962,30.9855523508697,14.115912515575,35.6727335589304,42.6640021891999,16.8863011988747,16.2150313904063,18.704404465547,12.3318590096585,5.95557132388495,13.0629082377046,10.4091196059682,11.5696881758614,8.99400439298628,10.399862198131,10.1126288136706,16.9649898295062,2.47194967734374,15.6167305473505,7.07688441559899,15.5296175949513,11.0420759230197,12.6067565815158,13.0474232852686,6.14839673724249,6.91174132484402,14.8165092020983,13.1796636956512,16.7972764678154,10.4197586199913,20.2217363196511,14.640019290196,19.0994615211554,11.4724051326902,7.41574826257959,14.5451631191692,10.5456820994042,19.8586759508117,15.1776504144313,57.6207889228778,30.5140691035387,23.291559290324,27.3583504275833,23.4080768746954,24.5648853072216,24.8333221902347,24.5978342946912,29.0475346135159,12.1590584247337,20.0478233427543,21.3689870589636,19.7065259063623,20.3852031157645,17.2389294519871,14.9748431604532,18.7261744131229,19.7043924150308,9.83098462238529,9.26452465612975,7.10408748488982,17.1914391204467,15.2441938987713,15.6653993471083,15.1516630774535,16.9217239302767,17.4321837562737,18.1376476905318,14.4867636755794,16.9309746432396,18.5952630402233,15.2675741593559,15.4841426232584,11.4035990191759,11.8557062257167,14.3600868073598,10.3042074796422,13.9950272835827,4.95628174475697,5.81791246659797,16.6364835417482,18.1144604051142,18.0414445850931,16.3363654944907,12.8979265430025,15.5985013412299,11.8632265386128,10.2113351928887,10.304743560811,13.5290400987983,12.8676297498619,8.08937467788799,12.1037307929829,9.55878111620963,23.8981555200883,19.1937501184344,21.4144697778853,20.9760867680674,15.9041039477453,19.4977579295086,19.7297995827683,16.9751670176542,16.7988638790271,20.4839292110189,6.81841042300442,7.84171996865642,7.86235980452812,5.39669069723649,7.50582449137461,8.68237775108701,6.11102044275408,7.76779571117189,5.18832725680113,5.49122826376163,7.18841032636773,9.67566463938109,11.8574315783533,10.6083128737787,5.20252499213545,5.30687873499704,14.4107488329952,20.0860896476714,20.5335870316953,19.6904299499218,17.3670783733492,19.4307258632506,16.1869675802489,15.6106918286239,18.128041572212,15.9454576547118,18.975117470241,14.5838350097007,14.850908440467,12.5844680965915,3.01582567878545,10.3342079925555,12.7858710984949,16.8321415245887,20.7110261084252,17.3473296156461,13.114795630134,12.876017287423,28.7112479668794,19.9123759591286,27.7896183075311,22.4630670075399,22.057068734157,24.0615051170508,28.3367491172426,27.4720506436633,27.6701444562566,12.2102100240287,15.1875891172847,16.3820355373875,18.4062264069541,15.6721616823909,7.96470830039777,14.0812768969889,12.9999129494843,7.54420319023592,6.79194353625777,11.0676653259814,13.6966995379157,15.2684166380552,12.83390562185,10.4292130118819,6.32511651449993,10.3135543248187,24.5116516142727,32.0508747375732,19.2744438836304,24.4344219936015,19.6847659342924,16.2315624017884,20.404078554663,13.700922710157,1.17335854031855,2.1183207086382,16.0985730580122,10.3878339353132,17.7610869365496,15.6210475563924,11.9372344003136,12.6388492803697,11.659233465194,25.2178410734293,6.4930934703184,11.3512777379772,10.5560880600736,6.02779062415011,3.55404992074665,7.54967971581525,16.9978429993855,15.6745626602497,16.1693969351176,18.1387417422872,19.6128316020304,19.5186688441775,17.2808545314882,17.1452402731864,15.0670168984863,15.9139928734088,16.4480376893418,13.0877970992015,14.2576470620972,31.6883049674332,0.56369293868419,8.97099276263873,10.7548018797113,11.6670713006429,8.65370817300798,10.644235905919,13.6134396829075,14.3224823328345,7.02557607652263,1.93267296660805,5.18454011264158,7.58426689507628,9.93353554921804,9.24398614483445,7.01572444080093,7.16106782669926,7.15252877212554,5.88957702647847,7.97523446742717,7.87538309595551,8.68757595866998,8.87270429204197,7.40679893622118,4.81059208201647,8.88264456579924,12.4701710988366,3.32978930061097,0.986852422704233,0.671538465456314,18.1598218390259,7.13193406714492,11.1722490803032,15.6488916727718,14.0440189129902,7.90652579663893,7.36520378411483,6.30185064783336,10.1393377582776,8.90607275701835,9.06472676867641,10.8003600037089,7.20513925158753,9.06284817968409,10.8729665467882,23.2483658588556,28.3307660114732,18.7806966329548,15.3157231753025,15.5113740344707,14.5236371675511,14.8905307627082,13.8043488350059,17.329637317958,18.9522908822848,16.2226751929753,15.4673599936582,18.4473769715668,17.4148414541244,18.4367855347519,20.9569224164552,17.8461861955077,17.1689206212697,19.3680373377554,17.6638704161277,16.8005933668854,16.6827257789777,19.7902037656276,15.2613737463945,17.4102353768362,15.9075462836352,16.4635175585495,17.3626009548976,14.2594319538155,17.3954104213899,18.2697927911228,17.829311309977,21.6892452879935,17.9726735775721,16.397061933397,13.989392364525,12.1644436391612,15.4707158914775,12.242453252406,15.8825821766051,18.3175590140133
|short_description=p1@Mthfd2l
}}
}}

Revision as of 18:47, 18 April 2012

Short description:p1@Mthfd2l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mthfd2l_5end
Coexpression cluster:NA
Association with transcript: 13bp_to_ENSMUST00000071652, NM_026788, uc008ybo.1, uc008ybp.1_5end
EntrezGene:Mthfd2l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mthfd2l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.02
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I38.17
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.22
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.31
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.49
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.21
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H214.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.55
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.31
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I116.80
GP2+ M cell, pool3.CNhs13240.11847-124I212.93
Ileum epithelium, pool1.CNhs13199.10252-104B923.37
Ileum epithelium, pool2.CNhs13232.10253-104C119.66
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C824.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F529.75
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F633.08
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F731.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D818.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B319.09
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B719.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C235.32
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B822.41
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C425.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.44
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C330.95
Mouse Granule cells, donor2.CNhs12357.11731-123E319.04
Mouse Granule cells, donor3.CNhs12108.11636-122C734.23
Mouse Meningeal cells, donor1.CNhs12132.11716-123C620.33
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C722.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E727.69
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D227.00
Mouse Microglia, donor1.CNhs12629.11718-123C813.48
Mouse Microglia, donor2.CNhs12634.11736-123E819.21
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D535.57
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.92
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D936.39
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F135.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.97
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D226.70
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F225.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D624.82
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.84
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.52
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D634.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F631.61
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E140.08
Mouse Schwann, donor1.CNhs12507.11728-123D940.36
Mouse Schwann, donor2.CNhs12573.11746-123F918.67
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G324.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E322.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I827.21
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G630.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.70
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.33
accessory axillary lymph node, adult.CNhs10475.1063-29H95.96
adrenal gland, adult.CNhs10508.49-24D713.06
adrenal gland, embryo E14.CNhs11038.406-44C510.41
adrenal gland, embryo E16.CNhs11004.1254-43D611.57
adrenal gland, embryo E17.CNhs11043.1263-45I18.99
adrenal gland, embryo E18.CNhs11026.1262-18F510.40
adrenal gland, neonate N00.CNhs11191.1311-23C110.11
adrenal gland, neonate N25.CNhs11223.1377-27I316.96
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H115.62
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F515.53
bone (os femoris), neonate N16.CNhs11225.1525-43A611.04
bone (os femoris), neonate N20.CNhs11195.1350-25C312.61
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H714.82
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.18
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.42
corpora quadrigemina, adult.CNhs10501.16-22A420.22
corpus striatum, adult.CNhs10487.19-21D814.64
corpus striatum, neonate N00.CNhs11226.630-43F119.10
cortex, adult.CNhs10473.12-14D511.47
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F214.55
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.86
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.18
epididymis, adult.CNhs10490.58-23B257.62
eyeball, adult.CNhs10484.31-12G430.51
eyeball, embryo E12.CNhs11016.345-16C623.29
eyeball, embryo E14.CNhs10521.399-16E227.36
eyeball, embryo E15.CNhs10593.426-16C923.41
eyeball, embryo E17.CNhs11023.1261-18D424.56
eyeball, neonate N00.CNhs11207.633-15C624.83
eyeball, neonate N01.CNhs11140.1532-43E724.60
eyeball, neonate N02.CNhs11205.1551-44G829.05
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E220.05
forelimb, embryo E12.CNhs10600.359-14H221.37
forelimb, embryo E13.CNhs10589.384-1E219.71
forelimb, embryo E14.CNhs10577.413-26A820.39
forelimb, embryo E15.CNhs11007.437-20E717.24
forelimb, embryo E17.CNhs10598.1517-43C414.97
forelimb, embryo E18.CNhs11008.1520-43B518.73
gonad, embryo E13.CNhs11044.1564-45I619.70
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E917.19
heart, embryo E12.CNhs11015.353-12F515.24
heart, embryo E13.CNhs11013.376-3I915.67
heart, embryo E14.CNhs10597.403-26D415.15
heart, embryo E15.CNhs11017.431-16C816.92
heart, embryo E16.CNhs11021.457-17C617.43
heart, embryo E17.CNhs11025.479-18E518.14
heart, embryo E18.CNhs11030.1283-20G314.49
heart, neonate N00.CNhs11213.639-21E316.93
heart, neonate N03.CNhs11221.1349-25I218.60
heart, neonate N10.CNhs11118.749-24G115.27
heart, neonate N16.CNhs11209.782-15G115.48
heart, neonate N20.CNhs11127.821-26I611.40
heart, neonate N25.CNhs11196.1351-25D311.86
heart, neonate N30.CNhs11202.1390-42D214.36
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G114.00
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A35.82
intestine, embryo E12.CNhs11019.1251-16I516.64
intestine, embryo E13.CNhs11010.381-16D518.11
intestine, embryo E15.CNhs10602.976-16D818.04
intestine, embryo E16.CNhs10585.463-22H416.34
intestine, embryo E17.CNhs10582.482-18D312.90
intestine, embryo E18.CNhs10526.1289-20F715.60
intestine, neonate N00.CNhs11126.644-26D111.86
intestine, neonate N01.CNhs11192.1322-23E910.21
intestine, neonate N06.CNhs11102.688-20B810.30
intestine, neonate N07.CNhs11095.720-20F213.53
intestine, neonate N10.CNhs11098.755-23A512.87
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E312.10
intestine, neonate N30.CNhs11131.1384-42G19.56
kidney, embryo E14.CNhs10606.411-4I923.90
kidney, embryo E15.CNhs10997.434-16F819.19
kidney, embryo E16.CNhs10584.464-22A521.41
kidney, embryo E17.CNhs11028.483-18I220.98
kidney, embryo E18.CNhs11001.1288-20C715.90
kidney, neonate N00.CNhs11214.646-21G719.50
kidney, neonate N10.CNhs11206.758-6D519.73
kidney, neonate N20.CNhs11113.832-19I116.98
kidney, neonate N25.CNhs11122.1353-25F316.80
kidney, neonate N30.CNhs11203.1385-42H120.48
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F87.84
liver, embryo E13.CNhs10524.378-3H67.86
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D77.51
liver, embryo E16.CNhs10523.462-17F58.68
liver, embryo E17.CNhs10510.481-18A36.11
liver, embryo E18.CNhs10579.499-43G47.77
liver, neonate N00.CNhs11117.641-24F45.19
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H29.68
liver, neonate N10.CNhs11115.751-24B911.86
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H15.20
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B114.41
lung, embryo E12.CNhs10522.354-16G220.09
lung, embryo E14.CNhs10604.404-26F820.53
lung, embryo E15.CNhs11020.432-17C519.69
lung, embryo E16.CNhs10998.458-17B617.37
lung, embryo E17.CNhs10605.480-44A619.43
lung, embryo E18.CNhs10583.1287-20I616.19
lung, neonate N00.CNhs11224.640-42C615.61
lung, neonate N06.CNhs11212.683-20E518.13
lung, neonate N07.CNhs11111.715-19A315.95
lung, neonate N10.CNhs11219.750-23E618.98
lung, neonate N20.CNhs11109.822-18A414.58
lung, neonate N25.CNhs11119.1359-25C714.85
lung, neonate N30.CNhs11133.1394-42H212.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.33
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H216.83
medulla oblongata, adult.CNhs10477.17-12C220.71
medulla oblongata, neonate N30.CNhs11200.1396-42A317.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.88
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E128.71
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E219.91
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E327.79
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D722.46
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D822.06
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D924.06
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D428.34
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D527.47
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D627.67
olfactory brain, adult.CNhs10489.18-22I912.21
ovary, adult.CNhs10507.91-2I715.19
ovary, embryo E18.CNhs11040.505-44H716.38
ovary, neonate N00.CNhs11217.1299-22I418.41
oviduct, adult pregnant day01.CNhs10500.988-6G615.67
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F414.08
pancreas, embryo E15.CNhs11042.1556-45F213.00
pancreas, embryo E16.CNhs11003.460-26E57.54
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G913.70
pancreas, neonate N01.CNhs11138.1531-43D715.27
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B610.43
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G824.51
pituitary gland, embryo E12.CNhs11018.346-16E632.05
pituitary gland, embryo E13.CNhs11009.370-44C719.27
pituitary gland, embryo E14.CNhs11037.398-44A524.43
pituitary gland, embryo E15.CNhs10592.427-16B919.68
pituitary gland, embryo E16.CNhs11036.449-43F616.23
pituitary gland, embryo E17.CNhs11039.1265-44F520.40
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F816.10
skin, adult.CNhs10492.30-1C310.39
skin, neonate N00.CNhs11124.650-25G417.76
skin, neonate N03.CNhs11215.662-22H315.62
skin, neonate N06.CNhs11097.693-20I511.94
skin, neonate N10.CNhs11108.762-6C412.64
small intestine, neonate N16.CNhs11114.790-21I111.66
spinal cord, adult.CNhs10505.24-13C925.22
spleen, adult.CNhs10465.25-2G26.49
spleen, embryo E16.CNhs11035.461-43C111.35
spleen, embryo E18.CNhs11011.1271-21F210.56
spleen, neonate N10.CNhs11116.752-24D16.03
spleen, neonate N20.CNhs11112.824-19H13.55
spleen, neonate N25.CNhs11099.1354-25G37.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C915.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D316.17
stomach, adult.CNhs10503.33-1H618.14
stomach, embryo E12.CNhs10588.356-43E319.61
stomach, embryo E15.CNhs10603.1252-16G819.52
stomach, embryo E16.CNhs11022.459-17D417.28
stomach, embryo E17.CNhs11006.1035-18D517.15
stomach, embryo E18.CNhs10999.1286-20C615.07
stomach, neonate N03.CNhs11193.1340-24B815.91
stomach, neonate N07.CNhs11210.718-18A916.45
stomach, neonate N25.CNhs11104.1355-25E413.09
stomach, neonate N30.CNhs11134.1386-42I114.26
submandibular gland, adult.CNhs10469.59-29C131.69
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F58.97
testis, embryo E15.CNhs11034.443-27C510.75
testis, embryo E16.CNhs11033.470-26G511.67
testis, embryo E17.CNhs11029.486-18I58.65
testis, embryo E18.CNhs11027.503-18G510.64
testis, neonate N00.CNhs11189.1300-22B713.61
testis, neonate N07.CNhs11222.726-26I414.32
testis, neonate N10.CNhs11204.763-44D97.03
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I49.93
thymus, embryo E15.CNhs11005.430-45I29.24
thymus, embryo E16.CNhs11002.456-26C57.02
thymus, embryo E17.CNhs10581.478-18C17.16
thymus, embryo E18.CNhs10595.1273-19G47.15
thymus, neonate N02.CNhs11181.1541-43F85.89
thymus, neonate N03.CNhs11137.2104-43C77.98
thymus, neonate N06.CNhs11197.681-26C47.88
thymus, neonate N07.CNhs11211.713-19D38.69
thymus, neonate N10.CNhs11194.748-24E48.87
thymus, neonate N20.CNhs11186.820-7A27.41
thymus, neonate N25.CNhs11125.1362-25G74.81
thymus, neonate N30.CNhs11132.1393-42G28.88
tongue, adult.CNhs10499.32-1B412.47
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E418.16
uterus, adult pregnant day19.CNhs10497.590-15F57.13
uterus, adult.CNhs10509.92-27E511.17
vagina, adult.CNhs10502.89-27D515.65
vesicular gland, adult.CNhs10491.51-27F814.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I823.25
whole body, embryo E12.CNhs10587.857-27C928.33
whole body, embryo E13.CNhs10512.372-23H218.78
whole body, embryo E14.5.CNhs10578.420-27D215.32
whole body, embryo E14.CNhs10519.395-14B115.51
whole body, embryo E16.CNhs10514.453-14F214.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.33
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.95
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.96
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.66
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.68
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.79
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G517.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.97
whole body, embryo E17.5.CNhs10513.490-9F916.40
whole body, embryo E17.CNhs10517.475-3I513.99
whole body, embryo E18.CNhs10516.493-3B312.16
whole body, neonate N00.CNhs10525.657-19C215.47
whole body, neonate N01.CNhs10576.659-23C612.24
whole body, neonate N06.CNhs10515.692-21D115.88
whole body, neonate N10.CNhs10518.761-6B418.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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