Personal tools

FFCP PHASE1:Mm9::chr3:36512292..36512319,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Bbs7_5end
|description=CAGE_peak_1_at_Bbs7_5end
|id=chr3:36512292..36512319,-
|id=chr3:36512292..36512319,-
|ontology_enrichment_celltype=CL:0000055!8.01e-11!50;CL:0000393!1.32e-09!39;CL:0000211!1.32e-09!39;CL:0000221!6.40e-09!44;CL:0000133!6.40e-09!44;CL:0002319!6.73e-09!43;CL:0000540!4.31e-07!33;CL:0000047!4.31e-07!33;CL:0000031!4.31e-07!33;CL:0000404!4.31e-07!33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=3.36312578920067,0.348975407639361,0,0.30246421130683,0,2.85394762250213,2.33612640595526,1.42035655785734,0,0,0,0.0797721589953364,0.342401459862411,1.39872643870396,0,1.61980213911861,2.09868563438444,0.157731082679119,0.822686601634433,0.84877930359606,10.0351082378262,0.297872853602656,0.261199789138935,1.59992422793407,1.83527424853736,0,1.29228598847722,0.430942465371778,1.52018735565099,1.76421090831952,1.33038306393183,1.90509202037889,1.23012957516914,0,2.59966457776147,3.98963148860382,3.47087905646027,0,0.7813353445238,0,0,0,0,11.7084040717287,11.6583470902442,6.24058957349717,9.38869613217647,8.28495594245697,3.29529274101708,10.1103547518627,7.97922603264566,7.18762821824858,0.335565212115473,0,1.00828139742739,7.97504251711436,14.3266719969378,7.21940929188419,4.24864567805155,2.64495489636016,7.60597684207415,5.08266798103698,0.889294796111139,3.5995988691256,3.9554654502679,2.8419204597844,3.89480143673926,5.76327457982332,5.49554945234932,3.37514845829227,5.04779907243317,3.71346279724945,7.28866185140325,5.63457676388789,4.12135525378416,4.5960939330501,9.91042928994498,17.2377906415003,16.5895055916743,5.27545150920775,5.39777097254217,3.64639359389732,10.3297709630511,16.8828783009504,17.1134037510027,9.72274332063103,10.2507610175354,10.0655700745662,3.40767869999328,8.01058537131927,4.34796733052517,1.72084775396277,2.719885334831,4.31762553310254,7.14754059192436,6.2723764193627,7.02222100658759,6.47635225796619,7.53379413348319,5.65343319216544,4.64783285263046,2.56652954828636,12.7402619853323,0,1.94841936910093,3.29367825117628,4.54972000513305,4.22480354960522,3.10725460376606,5.78924342352817,2.60227990149204,3.34912026143355,4.84292544237723,3.01445281105245,3.64524992120685,5.40366342717605,3.95511948374998,4.33798070759735,0.884610551949874,4.20593809863264,3.75430581382669,3.39412677194655,1.86391761218122,14.6390398505774,10.4723353406728,1.78819938646014,0.479260498023681,1.19980546198682,0.381210681219194,14.0803201040533,10.980014467647,5.6544458450789,9.21268897019065,7.41574826257959,10.5971902725376,7.30085683804909,4.17541391786297,2.48813941220186,2.52722758433675,11.5743020737561,2.73252930221678,2.75882525320168,3.42118046630164,5.72678307775717,6.39543092022482,6.79002717509704,4.02917415606834,20.1788629176432,1.72454394346274,2.26927296201383,3.69497360744293,3.06874025398605,3.61461423993277,7.66154766348766,3.49829631893504,2.38841120182192,1.40442637462647,0.772043721344145,1.13665399758237,1.86413195281952,1.87620847984877,2.34080679899319,3.07768156260773,2.75469924446365,3.08534225774756,4.88321283975857,3.21928081679543,3.73649095574942,5.10135534731789,7.55170334763838,5.02626619184305,4.9707995724613,5.04965265169416,5.36825675041487,7.78072809687271,3.91037527041281,0,0.793351699990633,2.98603550749328,2.32236671860439,3.47942145569652,4.63872106633688,4.22518283305254,3.61428689613862,0.474529061544512,1.64698954724011,3.2673577144035,3.18330355265841,2.33956904542944,3.59527763461689,1.72910439899755,2.58883655230677,1.32767530667157,3.08470984046268,0,5.09128319613286,4.65485969202302,5.11991485199326,7.71485752915939,9.74226976665374,9.57692239832386,11.105744752962,6.81841042300442,2.66952169145751,3.93117990226406,4.94696647246678,5.27436315610108,4.82354319504834,2.5462585178142,4.89083433666378,2.10775794807546,3.84385978463314,7.18841032636773,3.72140947668503,5.30464044294753,6.56705082662491,8.25228102200796,9.64887042726734,9.79191907883005,2.4633883530163,4.56301934037672,3.73439188705414,3.28566347603903,5.52770649557992,4.99891645860629,3.51240566144038,6.9359463406724,4.20782910332672,4.46473352240964,6.39066927391378,4.66249451037918,5.78596234326046,3.01582567878545,3.26343410291226,6.88469982226651,3.58717770196152,12.5229460190478,10.4318401067061,7.37707254195039,10.3513080153793,2.83957397474631,6.63745865304285,5.60100834105277,9.79772071605463,8.46634961513098,5.66153061577665,6.07216052512342,7.3063964477828,5.92931666919785,10.2822821254978,5.96148357874728,2.31485284767432,4.39794790254655,4.28922319728592,0,2.18502572539483,3.93020624054176,1.69744571780308,2.06711325016541,2.76691633149535,3.6179961043551,3.99887102425256,1.42598951353889,3.16036757935816,1.05418608574999,2.06271086496374,12.5962654128902,2.34079422240703,2.32845630808958,3.64372959553707,4.61084607469911,3.0322698992352,5.10101963866575,2.13125464380219,2.58138878870081,1.69465656691056,1.7642271844397,7.91454014119104,3.55221738730992,4.52346936961169,4.53614907211919,5.41664969158702,0.874442509889552,10.9400928186201,1.70870880797853,2.47664241555867,4.62986318424279,2.44878994106098,2.05041341581538,3.66045077130436,0.169978429993855,1.11961161858926,0.967399816630967,2.86401185404534,2.05618395827738,2.23651413839534,4.53622431451565,4.59994251231831,2.18362563746178,3.50647300600534,5.12451425497083,4.71160695571253,5.31421390496351,2.4853572523477,27.6209539955253,3.58839710505549,4.96375471371293,3.30567020184881,4.1331143512874,5.06868376472335,5.04636126176742,4.9477666240701,5.24296722128554,25.1247485659046,24.1945205256607,1.58005560314089,2.8381530140623,4.62199307241723,2.07873316764472,3.75956060901711,2.58285761215644,1.68273629327956,2.51072196196781,1.00966449948148,1.21930890648,0.806609481094724,0.877120926657772,1.73181314952593,1.63627663054197,5.8949899739955,3.55177525398503,4.66512054369274,3.52557694364565,5.02292944483695,4.50437941082837,3.11357761254351,3.64426244434412,3.00943262421218,6.7770221114048,5.52390283808612,10.8850147553485,4.64003592327956,3.42541259885321,13.5970901530146,7.42524750254986,8.10578165803597,8.15656336171568,8.28416498802912,3.1136204275253,3.99024873401031,3.24393850932855,4.132814190161,4.61148957781561,7.53758384645058,6.44515510624684,5.35691148821125,4.49286893428541,3.79045817645696,7.35089969681695,5.65879024158229,3.55837728385553,4.54578582074572,3.96304735793732,2.85776214769844,4.51948871184936,3.47236596834669,7.82963211526283,3.23837624295674,5.14303878578123,4.2594193478241,6.19934093863034,4.79643174886684,5.45834406408918,5.16149108139227,5.12198324043763,3.41990624869196,5.29636043998861,3.36685362994643,4.03359061622192,5.02372860115374,7.36615877705441,5.11291575913688,5.98010494041538,4.24677982494508,3.04111090979031,3.00819475667618,3.63447830930802,4.85301122062934,4.63735671240843
|phase1_expression=3.36312578920067,0.348975407639361,0,0.30246421130683,0,2.85394762250213,2.33612640595526,1.42035655785734,0,0,0,0.0797721589953364,0.342401459862411,1.39872643870396,0,1.61980213911861,2.09868563438444,0.157731082679119,0.822686601634433,0.84877930359606,10.0351082378262,0.297872853602656,0.261199789138935,1.59992422793407,1.83527424853736,0,1.29228598847722,0.430942465371778,1.52018735565099,1.76421090831952,1.33038306393183,1.90509202037889,1.23012957516914,0,2.59966457776147,3.98963148860382,3.47087905646027,0,0.7813353445238,0,0,0,0,11.7084040717287,11.6583470902442,6.24058957349717,9.38869613217647,8.28495594245697,3.29529274101708,10.1103547518627,7.97922603264566,7.18762821824858,0.335565212115473,0,1.00828139742739,7.97504251711436,14.3266719969378,7.21940929188419,4.24864567805155,2.64495489636016,7.60597684207415,5.08266798103698,0.889294796111139,3.5995988691256,3.9554654502679,2.8419204597844,3.89480143673926,5.76327457982332,5.49554945234932,3.37514845829227,5.04779907243317,3.71346279724945,7.28866185140325,5.63457676388789,4.12135525378416,4.5960939330501,9.91042928994498,17.2377906415003,16.5895055916743,5.27545150920775,5.39777097254217,3.64639359389732,10.3297709630511,16.8828783009504,17.1134037510027,9.72274332063103,10.2507610175354,10.0655700745662,3.40767869999328,8.01058537131927,4.34796733052517,1.72084775396277,2.719885334831,4.31762553310254,7.14754059192436,6.2723764193627,7.02222100658759,6.47635225796619,7.53379413348319,5.65343319216544,4.64783285263046,2.56652954828636,12.7402619853323,0,1.94841936910093,3.29367825117628,4.54972000513305,4.22480354960522,3.10725460376606,5.78924342352817,2.60227990149204,3.34912026143355,4.84292544237723,3.01445281105245,3.64524992120685,5.40366342717605,3.95511948374998,4.33798070759735,0.884610551949874,4.20593809863264,3.75430581382669,3.39412677194655,1.86391761218122,14.6390398505774,10.4723353406728,1.78819938646014,0.479260498023681,1.19980546198682,0.381210681219194,14.0803201040533,10.980014467647,5.6544458450789,9.21268897019065,7.41574826257959,10.5971902725376,7.30085683804909,4.17541391786297,2.48813941220186,2.52722758433675,11.5743020737561,2.73252930221678,2.75882525320168,3.42118046630164,5.72678307775717,6.39543092022482,6.79002717509704,4.02917415606834,20.1788629176432,1.72454394346274,2.26927296201383,3.69497360744293,3.06874025398605,3.61461423993277,7.66154766348766,3.49829631893504,2.38841120182192,1.40442637462647,0.772043721344145,1.13665399758237,1.86413195281952,1.87620847984877,2.34080679899319,3.07768156260773,2.75469924446365,3.08534225774756,4.88321283975857,3.21928081679543,3.73649095574942,5.10135534731789,7.55170334763838,5.02626619184305,4.9707995724613,5.04965265169416,5.36825675041487,7.78072809687271,3.91037527041281,0,0.793351699990633,2.98603550749328,2.32236671860439,3.47942145569652,4.63872106633688,4.22518283305254,3.61428689613862,0.474529061544512,1.64698954724011,3.2673577144035,3.18330355265841,2.33956904542944,3.59527763461689,1.72910439899755,2.58883655230677,1.32767530667157,3.08470984046268,0,5.09128319613286,4.65485969202302,5.11991485199326,7.71485752915939,9.74226976665374,9.57692239832386,11.105744752962,6.81841042300442,2.66952169145751,3.93117990226406,4.94696647246678,5.27436315610108,4.82354319504834,2.5462585178142,4.89083433666378,2.10775794807546,3.84385978463314,7.18841032636773,3.72140947668503,5.30464044294753,6.56705082662491,8.25228102200796,9.64887042726734,9.79191907883005,2.4633883530163,4.56301934037672,3.73439188705414,3.28566347603903,5.52770649557992,4.99891645860629,3.51240566144038,6.9359463406724,4.20782910332672,4.46473352240964,6.39066927391378,4.66249451037918,5.78596234326046,3.01582567878545,3.26343410291226,6.88469982226651,3.58717770196152,12.5229460190478,10.4318401067061,7.37707254195039,10.3513080153793,2.83957397474631,6.63745865304285,5.60100834105277,9.79772071605463,8.46634961513098,5.66153061577665,6.07216052512342,7.3063964477828,5.92931666919785,10.2822821254978,5.96148357874728,2.31485284767432,4.39794790254655,4.28922319728592,0,2.18502572539483,3.93020624054176,1.69744571780308,2.06711325016541,2.76691633149535,3.6179961043551,3.99887102425256,1.42598951353889,3.16036757935816,1.05418608574999,2.06271086496374,12.5962654128902,2.34079422240703,2.32845630808958,3.64372959553707,4.61084607469911,3.0322698992352,5.10101963866575,2.13125464380219,2.58138878870081,1.69465656691056,1.7642271844397,7.91454014119104,3.55221738730992,4.52346936961169,4.53614907211919,5.41664969158702,0.874442509889552,10.9400928186201,1.70870880797853,2.47664241555867,4.62986318424279,2.44878994106098,2.05041341581538,3.66045077130436,0.169978429993855,1.11961161858926,0.967399816630967,2.86401185404534,2.05618395827738,2.23651413839534,4.53622431451565,4.59994251231831,2.18362563746178,3.50647300600534,5.12451425497083,4.71160695571253,5.31421390496351,2.4853572523477,27.6209539955253,3.58839710505549,4.96375471371293,3.30567020184881,4.1331143512874,5.06868376472335,5.04636126176742,4.9477666240701,5.24296722128554,25.1247485659046,24.1945205256607,1.58005560314089,2.8381530140623,4.62199307241723,2.07873316764472,3.75956060901711,2.58285761215644,1.68273629327956,2.51072196196781,1.00966449948148,1.21930890648,0.806609481094724,0.877120926657772,1.73181314952593,1.63627663054197,5.8949899739955,3.55177525398503,4.66512054369274,3.52557694364565,5.02292944483695,4.50437941082837,3.11357761254351,3.64426244434412,3.00943262421218,6.7770221114048,5.52390283808612,10.8850147553485,4.64003592327956,3.42541259885321,13.5970901530146,7.42524750254986,8.10578165803597,8.15656336171568,8.28416498802912,3.1136204275253,3.99024873401031,3.24393850932855,4.132814190161,4.61148957781561,7.53758384645058,6.44515510624684,5.35691148821125,4.49286893428541,3.79045817645696,7.35089969681695,5.65879024158229,3.55837728385553,4.54578582074572,3.96304735793732,2.85776214769844,4.51948871184936,3.47236596834669,7.82963211526283,3.23837624295674,5.14303878578123,4.2594193478241,6.19934093863034,4.79643174886684,5.45834406408918,5.16149108139227,5.12198324043763,3.41990624869196,5.29636043998861,3.36685362994643,4.03359061622192,5.02372860115374,7.36615877705441,5.11291575913688,5.98010494041538,4.24677982494508,3.04111090979031,3.00819475667618,3.63447830930802,4.85301122062934,4.63735671240843
|short_description=p1@Bbs7
|short_description=p1@Bbs7
}}
}}

Revision as of 19:03, 18 April 2012

Short description:p1@Bbs7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Bbs7_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000040148, ENSMUST00000129671, ENSMUST00000142333, NM_027810, uc008ozp.2, uc008ozq.2, uc008ozr.1_5end
EntrezGene:Bbs7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Bbs7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.71
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.24
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.28
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.33
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.07
Mouse Schwann, donor1.CNhs12507.11728-123D93.41
Mouse Schwann, donor2.CNhs12573.11746-123F98.01
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.22
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D75.79
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I14.84
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C13.65
adrenal gland, neonate N25.CNhs11223.1377-27I35.40
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H14.34
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B214.64
cerebellum, neonate N30.CNhs11135.1395-42I210.47
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A414.08
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F15.65
cortex, adult.CNhs10473.12-14D59.21
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B27.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G411.57
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D45.73
eyeball, neonate N00.CNhs11207.633-15C66.40
eyeball, neonate N01.CNhs11140.1532-43E76.79
eyeball, neonate N02.CNhs11205.1551-44G84.03
eyeball, neonate N16.CNhs11188.777-19A220.18
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E33.74
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G17.55
heart, neonate N16.CNhs11209.782-15G15.03
heart, neonate N20.CNhs11127.821-26I64.97
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D25.37
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D83.48
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F83.08
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G75.12
kidney, neonate N10.CNhs11206.758-6D57.71
kidney, neonate N20.CNhs11113.832-19I19.74
kidney, neonate N25.CNhs11122.1353-25F39.58
kidney, neonate N30.CNhs11203.1385-42H111.11
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E14.95
liver, embryo E15.CNhs10520.433-16D75.27
liver, embryo E16.CNhs10523.462-17F54.82
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H18.25
liver, neonate N30.CNhs11106.1382-42D19.65
lung, adult.CNhs10474.28-22B19.79
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E56.94
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E64.46
lung, neonate N20.CNhs11109.822-18A46.39
lung, neonate N25.CNhs11119.1359-25C74.66
lung, neonate N30.CNhs11133.1394-42H25.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C212.52
medulla oblongata, neonate N30.CNhs11200.1396-42A310.43
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.38
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.35
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.80
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.31
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I75.96
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G64.29
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G812.60
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B94.61
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C37.91
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H34.52
skin, neonate N06.CNhs11097.693-20I54.54
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C910.94
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F24.63
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D44.54
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A95.12
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I15.31
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G527.62
testis, embryo E13.CNhs11031.389-23F53.59
testis, embryo E15.CNhs11034.443-27C54.96
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I54.13
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B75.05
testis, neonate N07.CNhs11222.726-26I44.95
testis, neonate N10.CNhs11204.763-44D95.24
testis, neonate N20.CNhs11110.839-18H325.12
testis, neonate N30.CNhs11130.1391-42E224.19
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I24.62
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D31.22
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B45.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.67
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F54.50
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F27.54
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.35
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.11
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:36512292..36512319,-&oldid=936562"