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FFCP PHASE1:Mm9::chr5:42099374..42099409,-: Difference between revisions

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|description=CAGE_peak_1_at_Rab28_5end
|description=CAGE_peak_1_at_Rab28_5end
|id=chr5:42099374..42099409,-
|id=chr5:42099374..42099409,-
|ontology_enrichment_celltype=CL:0000117!3.77e-09!23;CL:0000337!3.77e-09!23;CL:0002321!1.45e-08!70;CL:0000220!1.45e-08!70;CL:0000055!1.81e-08!50;CL:0000221!3.16e-08!44;CL:0000133!3.16e-08!44;CL:0002319!9.25e-08!43;CL:0000393!1.57e-07!39;CL:0000211!1.57e-07!39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=16.8156289460034,8.72438519098403,6.3699893514535,4.83942738090928,5.50985302940982,6.88305014838748,4.67225281191051,4.26106967357202,1.54867594366833,2.80877431586392,1.54096171402954,3.5099749957948,2.73921167889929,4.37102012094987,3.99731714178795,2.02475267389826,4.19737126876888,4.88966356305268,3.15363197293199,4.2438965179803,13.7770130044733,3.67376519443276,2.35079810225042,3.67982572424835,3.67054849707472,5.16808767703518,6.46142994238612,4.30942465371778,3.04037471130198,7.56090389279792,3.99114919179548,3.17515336729816,2.46025915033828,0,7.51014211353314,7.14808975041517,6.53341940039581,35.1566569819002,33.5974198145234,40.8348520299563,29.9998058895817,27.3218193983378,43.2104214197727,6.6725313527056,6.18399280439039,4.9557623083654,2.34717403304412,5.88667922227206,11.2039953194581,8.94377535741704,5.17949760013841,14.3752564364972,5.87239121202077,0.725362142011344,1.34437519656986,9.26133969729409,11.1748041576115,10.3134418455488,9.91350658212029,8.46385566835253,6.97214543856797,5.08266798103698,3.55717918444456,7.64914759689189,4.94433181283487,5.6838409195688,8.08920298399693,11.5265491596466,9.53944433237994,8.91039192989158,9.04397333810943,12.5686433137674,10.6016899656774,7.83941114975706,8.91362880469598,10.1114066527102,9.91042928994498,19.9192247412893,17.2039317246993,7.78129097608144,9.78917786545783,6.77187381723788,19.821992929098,17.4456409109821,20.3221669543157,8.2496003932627,8.68467252874528,8.38797506213853,7.64834552665159,7.10372665003784,5.79728977403356,5.16254326188832,4.75979933595425,5.93673510801599,7.14754059192436,3.13618820968135,10.5333315098814,10.0553890321054,12.4697282209377,7.42013106471715,14.5068722369981,12.8326477414318,28.028576367731,14.2213340630666,3.89683873820185,5.06719730950197,1.51657333504435,10.0481814152773,3.6251303710604,7.71899123137089,4.68410382268567,3.04465478312141,2.99800146432876,4.22023393547343,5.05631440683531,7.1629957057915,3.70792451601561,5.06097749219691,6.19227386364912,11.3236794963186,10.8212344045593,7.27312879702833,0,6.14839673724249,9.63454851341893,4.08731288333746,8.38705871541442,7.19883277192089,8.00542430560307,8.68785708547972,7.77751024791665,7.66491547888473,9.03886464999838,9.2057564638919,9.97382613885888,9.08551073179443,5.70300437561771,6.22034853050465,4.80173241023982,13.2578369208479,5.33493816147085,6.66716102857071,5.94205028357652,6.63101198477146,9.18492738542926,8.96796041993949,11.5253121208466,15.5222022443409,4.095791865724,4.16033376369202,6.15828934573821,4.3839146485515,6.95118123063995,5.2237824978325,6.79081050146213,3.58261680273288,2.80885274925294,3.3455227924913,7.38825098428541,3.52113813310353,1.64168241986767,3.78130329068131,4.7348947117042,5.50939848892731,4.78228049950873,6.97601834251224,6.43856163359086,5.95503246072564,8.72167204541446,8.37254066803386,9.48505071686512,14.6199987425332,10.9775057645525,10.7365135008297,11.3556572224629,6.48299057989492,4.95628174475697,4.49565963328025,5.54549451391608,7.66381017139447,4.89696353023955,3.02525286935014,3.11329261382818,4.1849637744763,4.74529061544512,3.12928013975621,6.78605063760728,5.17286827306992,6.23885078781184,3.59527763461689,7.78096979548899,7.36822711041159,5.87970492954553,4.68418901699888,4.50830942692322,4.2766778847516,3.10323979468201,5.19005067188357,4.7427402843193,4.42830443938806,6.59394656933774,5.30607804863742,4.74324203339438,2.8363667971736,2.35870794135844,2.69834534861824,2.02860121388503,3.37648023653384,2.5462585178142,3.16465751195892,2.91843408195064,5.21666685057355,12.9391385874619,4.09355042435354,5.61667811606209,3.78868316920668,3.94674309748207,6.27176577772377,5.54259570499814,3.97931964718018,4.07412441105065,4.41337223015489,4.45911471748154,4.02015017860358,4.76087281772027,4.68320754858717,4.88668946729192,3.76489972402917,6.37819074629948,7.53771247692395,6.21665934717224,5.93061140184197,6.03165135757089,4.35124547054968,2.45882136509518,3.31124095565679,8.83028244932856,10.3146284201139,8.6885521049638,23.2273253028023,6.94118082715765,6.24701990874622,5.60100834105277,5.01834475700359,6.01556420022464,4.24614796183249,3.23848561339915,4.38383786866968,3.95287777946523,11.5675673911851,6.24536374916382,4.80777129901589,5.04949573996086,6.59880491890142,6.63725691699814,4.37005145078967,3.93020624054176,4.14931175462976,2.36241514304618,5.53383266299069,7.75284879504663,4.36240475373007,3.20847640546249,5.37262488490887,9.48767477174989,1.03135543248187,9.87274856685985,5.94201610303324,6.98536892426874,10.9311887866112,6.56158864476412,6.95638388648075,7.40470592709544,6.69822888052118,1.87737366450968,3.1774810629573,8.38007912608855,5.11147384118588,3.71368181400583,4.40284351975538,3.9392873521035,3.44695889464629,4.95517422270746,9.82754100655701,3.58828849675491,7.84270098260245,6.85219751267933,5.08594833912666,3.55404992074665,1.83022538565218,7.64902934972349,9.23679585336143,8.29199842826543,2.86401185404534,3.16335993581135,5.69294507955176,6.15630442684267,4.18176592028937,5.02233896616208,3.9110660451598,4.95920734352016,8.11443420150492,5.05498395837992,1.24267862617385,36.6400410144724,3.13984746692355,4.96375471371293,3.11121901350476,5.42471258606471,4.56181538825101,4.3422178298929,5.59878854828985,5.55754525456268,10.8712854371703,14.6895303191511,0.632022241256357,5.27085559754427,2.56777392912068,2.5984164595559,1.61124026100733,1.98681354781265,1.80293174279953,2.65841148914239,2.42319479875554,2.59103142626999,2.31900225814733,2.43644701849381,2.30908419936791,1.98690733708667,10.8830584135301,2.44184548711471,2.6017018416748,1.17519231454855,7.14801497919105,4.31669693537719,3.6630324853453,4.93047271881851,4.01257683228291,9.03602948187307,11.5081309126794,10.3121192419091,11.3423100346834,15.0718154349541,12.0863023582352,14.8504950050997,9.45674526770863,7.70342095273148,10.3552062350364,6.01966615988225,5.1873233542134,3.24393850932855,5.34834777550247,4.19226325255965,4.77993121970037,4.00044110042907,4.73880631649457,5.45562656306086,4.80124702351215,3.8021894983536,2.45214243801899,7.49132059759059,6.4665403928918,7.58148190214095,3.81034953026459,6.83717523074647,5.78727661391115,4.94503080963968,5.00476328456951,4.11443102862498,6.21165321557681,8.34526664815623,6.39524233182245,6.02300034658116,6.43071019976741,5.12198324043763,3.94604567156764,5.70377278152619,3.36685362994643,3.91495559809775,6.30428687203606,6.13846564754534,5.57772628269478,5.78719832943424,4.99621155875892,5.14649538579898,3.65280791882107,4.01705497344571,8.16188250742207,10.434052602919
|phase1_expression=16.8156289460034,8.72438519098403,6.3699893514535,4.83942738090928,5.50985302940982,6.88305014838748,4.67225281191051,4.26106967357202,1.54867594366833,2.80877431586392,1.54096171402954,3.5099749957948,2.73921167889929,4.37102012094987,3.99731714178795,2.02475267389826,4.19737126876888,4.88966356305268,3.15363197293199,4.2438965179803,13.7770130044733,3.67376519443276,2.35079810225042,3.67982572424835,3.67054849707472,5.16808767703518,6.46142994238612,4.30942465371778,3.04037471130198,7.56090389279792,3.99114919179548,3.17515336729816,2.46025915033828,0,7.51014211353314,7.14808975041517,6.53341940039581,35.1566569819002,33.5974198145234,40.8348520299563,29.9998058895817,27.3218193983378,43.2104214197727,6.6725313527056,6.18399280439039,4.9557623083654,2.34717403304412,5.88667922227206,11.2039953194581,8.94377535741704,5.17949760013841,14.3752564364972,5.87239121202077,0.725362142011344,1.34437519656986,9.26133969729409,11.1748041576115,10.3134418455488,9.91350658212029,8.46385566835253,6.97214543856797,5.08266798103698,3.55717918444456,7.64914759689189,4.94433181283487,5.6838409195688,8.08920298399693,11.5265491596466,9.53944433237994,8.91039192989158,9.04397333810943,12.5686433137674,10.6016899656774,7.83941114975706,8.91362880469598,10.1114066527102,9.91042928994498,19.9192247412893,17.2039317246993,7.78129097608144,9.78917786545783,6.77187381723788,19.821992929098,17.4456409109821,20.3221669543157,8.2496003932627,8.68467252874528,8.38797506213853,7.64834552665159,7.10372665003784,5.79728977403356,5.16254326188832,4.75979933595425,5.93673510801599,7.14754059192436,3.13618820968135,10.5333315098814,10.0553890321054,12.4697282209377,7.42013106471715,14.5068722369981,12.8326477414318,28.028576367731,14.2213340630666,3.89683873820185,5.06719730950197,1.51657333504435,10.0481814152773,3.6251303710604,7.71899123137089,4.68410382268567,3.04465478312141,2.99800146432876,4.22023393547343,5.05631440683531,7.1629957057915,3.70792451601561,5.06097749219691,6.19227386364912,11.3236794963186,10.8212344045593,7.27312879702833,0,6.14839673724249,9.63454851341893,4.08731288333746,8.38705871541442,7.19883277192089,8.00542430560307,8.68785708547972,7.77751024791665,7.66491547888473,9.03886464999838,9.2057564638919,9.97382613885888,9.08551073179443,5.70300437561771,6.22034853050465,4.80173241023982,13.2578369208479,5.33493816147085,6.66716102857071,5.94205028357652,6.63101198477146,9.18492738542926,8.96796041993949,11.5253121208466,15.5222022443409,4.095791865724,4.16033376369202,6.15828934573821,4.3839146485515,6.95118123063995,5.2237824978325,6.79081050146213,3.58261680273288,2.80885274925294,3.3455227924913,7.38825098428541,3.52113813310353,1.64168241986767,3.78130329068131,4.7348947117042,5.50939848892731,4.78228049950873,6.97601834251224,6.43856163359086,5.95503246072564,8.72167204541446,8.37254066803386,9.48505071686512,14.6199987425332,10.9775057645525,10.7365135008297,11.3556572224629,6.48299057989492,4.95628174475697,4.49565963328025,5.54549451391608,7.66381017139447,4.89696353023955,3.02525286935014,3.11329261382818,4.1849637744763,4.74529061544512,3.12928013975621,6.78605063760728,5.17286827306992,6.23885078781184,3.59527763461689,7.78096979548899,7.36822711041159,5.87970492954553,4.68418901699888,4.50830942692322,4.2766778847516,3.10323979468201,5.19005067188357,4.7427402843193,4.42830443938806,6.59394656933774,5.30607804863742,4.74324203339438,2.8363667971736,2.35870794135844,2.69834534861824,2.02860121388503,3.37648023653384,2.5462585178142,3.16465751195892,2.91843408195064,5.21666685057355,12.9391385874619,4.09355042435354,5.61667811606209,3.78868316920668,3.94674309748207,6.27176577772377,5.54259570499814,3.97931964718018,4.07412441105065,4.41337223015489,4.45911471748154,4.02015017860358,4.76087281772027,4.68320754858717,4.88668946729192,3.76489972402917,6.37819074629948,7.53771247692395,6.21665934717224,5.93061140184197,6.03165135757089,4.35124547054968,2.45882136509518,3.31124095565679,8.83028244932856,10.3146284201139,8.6885521049638,23.2273253028023,6.94118082715765,6.24701990874622,5.60100834105277,5.01834475700359,6.01556420022464,4.24614796183249,3.23848561339915,4.38383786866968,3.95287777946523,11.5675673911851,6.24536374916382,4.80777129901589,5.04949573996086,6.59880491890142,6.63725691699814,4.37005145078967,3.93020624054176,4.14931175462976,2.36241514304618,5.53383266299069,7.75284879504663,4.36240475373007,3.20847640546249,5.37262488490887,9.48767477174989,1.03135543248187,9.87274856685985,5.94201610303324,6.98536892426874,10.9311887866112,6.56158864476412,6.95638388648075,7.40470592709544,6.69822888052118,1.87737366450968,3.1774810629573,8.38007912608855,5.11147384118588,3.71368181400583,4.40284351975538,3.9392873521035,3.44695889464629,4.95517422270746,9.82754100655701,3.58828849675491,7.84270098260245,6.85219751267933,5.08594833912666,3.55404992074665,1.83022538565218,7.64902934972349,9.23679585336143,8.29199842826543,2.86401185404534,3.16335993581135,5.69294507955176,6.15630442684267,4.18176592028937,5.02233896616208,3.9110660451598,4.95920734352016,8.11443420150492,5.05498395837992,1.24267862617385,36.6400410144724,3.13984746692355,4.96375471371293,3.11121901350476,5.42471258606471,4.56181538825101,4.3422178298929,5.59878854828985,5.55754525456268,10.8712854371703,14.6895303191511,0.632022241256357,5.27085559754427,2.56777392912068,2.5984164595559,1.61124026100733,1.98681354781265,1.80293174279953,2.65841148914239,2.42319479875554,2.59103142626999,2.31900225814733,2.43644701849381,2.30908419936791,1.98690733708667,10.8830584135301,2.44184548711471,2.6017018416748,1.17519231454855,7.14801497919105,4.31669693537719,3.6630324853453,4.93047271881851,4.01257683228291,9.03602948187307,11.5081309126794,10.3121192419091,11.3423100346834,15.0718154349541,12.0863023582352,14.8504950050997,9.45674526770863,7.70342095273148,10.3552062350364,6.01966615988225,5.1873233542134,3.24393850932855,5.34834777550247,4.19226325255965,4.77993121970037,4.00044110042907,4.73880631649457,5.45562656306086,4.80124702351215,3.8021894983536,2.45214243801899,7.49132059759059,6.4665403928918,7.58148190214095,3.81034953026459,6.83717523074647,5.78727661391115,4.94503080963968,5.00476328456951,4.11443102862498,6.21165321557681,8.34526664815623,6.39524233182245,6.02300034658116,6.43071019976741,5.12198324043763,3.94604567156764,5.70377278152619,3.36685362994643,3.91495559809775,6.30428687203606,6.13846564754534,5.57772628269478,5.78719832943424,4.99621155875892,5.14649538579898,3.65280791882107,4.01705497344571,8.16188250742207,10.434052602919
|short_description=p1@Rab28
|short_description=p1@Rab28
}}
}}

Revision as of 23:29, 18 April 2012

Short description:p1@Rab28
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab28_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000031011, NM_027295, uc008xha.1, uc008xhb.1_5end
EntrezGene:Rab28
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Rab28

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.51
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.37
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I24.31
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C17.56
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G835.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H133.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H340.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G930.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H227.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H443.21
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C39.91
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.54
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.91
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.79
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.25
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.39
Mouse Schwann, donor1.CNhs12507.11728-123D97.65
Mouse Schwann, donor2.CNhs12573.11746-123F97.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.47
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.42
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.05
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D77.72
adrenal gland, embryo E14.CNhs11038.406-44C54.68
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C15.06
adrenal gland, neonate N25.CNhs11223.1377-27I37.16
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F511.32
bone (os femoris), neonate N16.CNhs11225.1525-43A610.82
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I29.63
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.39
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.01
corpora quadrigemina, adult.CNhs10501.16-22A48.69
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F17.66
cortex, adult.CNhs10473.12-14D59.04
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B29.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.22
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G413.26
eyeball, embryo E12.CNhs11016.345-16C65.33
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C95.94
eyeball, embryo E17.CNhs11023.1261-18D46.63
eyeball, neonate N00.CNhs11207.633-15C69.18
eyeball, neonate N01.CNhs11140.1532-43E78.97
eyeball, neonate N02.CNhs11205.1551-44G811.53
eyeball, neonate N16.CNhs11188.777-19A215.52
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E26.16
forelimb, embryo E14.CNhs10577.413-26A84.38
forelimb, embryo E15.CNhs11007.437-20E76.95
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B56.79
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.39
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C85.51
heart, embryo E16.CNhs11021.457-17C64.78
heart, embryo E17.CNhs11025.479-18E56.98
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E35.96
heart, neonate N03.CNhs11221.1349-25I28.72
heart, neonate N10.CNhs11118.749-24G18.37
heart, neonate N16.CNhs11209.782-15G19.49
heart, neonate N20.CNhs11127.821-26I614.62
heart, neonate N25.CNhs11196.1351-25D310.98
heart, neonate N30.CNhs11202.1390-42D210.74
hippocampus, adult.CNhs10478.13-16E811.36
hippocampus, neonate N00.CNhs11228.627-43G16.48
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D57.66
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H43.03
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A56.24
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E37.78
intestine, neonate N30.CNhs11131.1384-42G17.37
kidney, embryo E14.CNhs10606.411-4I95.88
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G75.19
kidney, neonate N10.CNhs11206.758-6D54.74
kidney, neonate N20.CNhs11113.832-19I14.43
kidney, neonate N25.CNhs11122.1353-25F36.59
kidney, neonate N30.CNhs11203.1385-42H15.31
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B15.54
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C54.41
lung, embryo E16.CNhs10998.458-17B64.46
lung, embryo E17.CNhs10605.480-44A64.02
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E54.89
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E66.38
lung, neonate N20.CNhs11109.822-18A47.54
lung, neonate N25.CNhs11119.1359-25C76.22
lung, neonate N30.CNhs11133.1394-42H25.93
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A310.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.69
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C223.23
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I76.25
ovary, embryo E18.CNhs11040.505-44H74.81
ovary, neonate N00.CNhs11217.1299-22I45.05
oviduct, adult pregnant day01.CNhs10500.988-6G66.60
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E54.15
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G89.87
pituitary gland, embryo E12.CNhs11018.346-16E65.94
pituitary gland, embryo E13.CNhs11009.370-44C76.99
pituitary gland, embryo E14.CNhs11037.398-44A510.93
pituitary gland, embryo E15.CNhs10592.427-16B96.56
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F57.40
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F88.38
skin, adult.CNhs10492.30-1C35.11
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H34.40
skin, neonate N06.CNhs11097.693-20I53.94
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C99.83
spleen, adult.CNhs10465.25-2G23.59
spleen, embryo E16.CNhs11035.461-43C17.84
spleen, embryo E18.CNhs11011.1271-21F26.85
spleen, neonate N10.CNhs11116.752-24D15.09
spleen, neonate N20.CNhs11112.824-19H13.55
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.29
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D46.16
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B83.91
stomach, neonate N07.CNhs11210.718-18A94.96
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I15.05
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G536.64
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C54.96
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I55.42
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B74.34
testis, neonate N07.CNhs11222.726-26I45.60
testis, neonate N10.CNhs11204.763-44D95.56
testis, neonate N20.CNhs11110.839-18H310.87
testis, neonate N30.CNhs11130.1391-42E214.69
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I45.27
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D32.59
thymus, neonate N10.CNhs11194.748-24E42.32
thymus, neonate N20.CNhs11186.820-7A22.44
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B410.88
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.60
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E47.15
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I86.02
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.02
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D18.16
whole body, neonate N10.CNhs10518.761-6B410.43





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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