Personal tools

FFCP PHASE1:Mm9::chr9:106340500..106340529,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:106340500..106340529,-
|short_description=p1@Acy1
|description=CAGE_peak_1_at_Acy1_5end
|association_with_transcript=37bp_to_ENSMUST00000024031,NM_025371,uc009rjp.1_5end
|EntrezGene=109652
|EntrezGene=109652
|HGNC=
|HGNC=
|UniProt=Q99JW2
|UniProt=Q99JW2
|association_with_transcript=37bp_to_ENSMUST00000024031,NM_025371,uc009rjp.1_5end
|description=CAGE_peak_1_at_Acy1_5end
|id=chr9:106340500..106340529,-
|ontology_enrichment_disease=
|phase1_expression=5.2849119544582,242.537908309356,214.759640991861,296.112462869387,390.698669358151,29.8825104003164,29.4351927150362,1.54947988129892,5.77233760821834,5.85161315804984,3.4243593645101,8.53562101250099,0.856003649656029,0.961624426608971,1.33243904726265,0.404950534779652,1.39912375625629,1.57731082679119,1.64537320326887,0.42438965179803,52.9819697641165,5.56029326724958,6.52999472847338,44.4778935365671,50.4700418347774,240.028961000078,164.551082532767,108.166558808316,89.5010305639521,121.730552674047,40.7984139605761,26.0362576118449,20.9122027778754,0,29.46286521463,38.8989070138872,31.4420808644048,1.25559489221072,3.1253413780952,0,0,0,0,4.78407908307194,4.8660926985367,3.30384153891027,14.0830441982647,4.79655344036982,7.90870257844099,4.47188767870852,5.87942970826523,14.3752564364972,1.17447824240415,1.45072428402269,1.68046899571232,7.20326420900652,5.44413535883638,3.6097046459421,1.82084814773638,1.5869729378161,1.26766280701236,18.6364492638023,6.22506357277798,0,2.96659908770092,1.4209602298922,3.59520132622086,6.91592949578798,2.7996195323289,2.29510095163874,2.73422449756797,3.14216082844184,3.09215957332259,2.32732518508413,1.62937300731002,0,6.60695285996332,3.57524546638526,6.45147439676223,1.84640802822271,0.640413505216868,2.6045668527838,5.58365998002762,3.93933827022176,3.66715794664344,3.24091444021034,2.13557521198654,1.4911955666024,4.54357159999104,5.36558076758177,3.76823835312181,31.8356834483113,45.5580793584193,56.6688351219708,39.6363614643078,29.5697745484241,43.3973258207113,2.89731548382698,3.89679006904303,2.12003744706204,5.0703631119605,1.28326477414318,2.54805239706646,0,3.46385665617943,2.78695852022608,2.52762222507392,80.042899683061,0.258937883647172,1.92974780784272,6.7659277438793,5.1759131313064,6.22661842591358,3.91878865436819,2.4693628498498,1.88499886994513,14.8316980640624,1.01219549843938,0.884610551949874,1.7794353494215,1.32504911076236,2.42437626567611,9.31958806090611,2.34224637609238,2.30391377494801,75.3598312865345,8.8663192134381,7.19883277192089,9.02198612218759,2.69623150928681,3.20250421973039,0.879580464790051,0.869121600961382,1.53429274398198,1.24672826735736,1.78465389374533,5.19380755636613,2.48813941220186,6.31806896084187,0.631325567659422,4.81445638962004,5.0578462975364,4.14142898552303,3.76762044589288,1.97305847538851,2.69038812598185,1.87403449119458,1.03481348295606,3.23351989399263,3.21480336285293,3.16712023495108,3.5071317188412,5.00485048606076,4.52727816478817,1.64625709126355,7.36426787228425,5.61770549850588,7.46308930632674,7.38825098428541,2.48550927042602,1.87620847984877,3.6012412292203,1.89395788468168,3.14822770795846,2.93107514486019,3.72054311600653,4.29237442239391,4.32031766758527,2.79751744852917,3.77585167381919,4.53985333456792,4.82459958503597,5.48875288227627,3.22095405024892,0.630869845692382,1.02904612379284,82.2742769629657,138.836547498361,5.75878276445132,3.94802342162745,4.89696353023955,6.85723983719365,12.6755484991576,12.7451169495415,64.5359523700536,21.9049609782934,15.5827829456167,12.7332142106337,15.9870551437679,50.3338868846364,66.3543813115311,89.6135729644652,11.0007382552787,7.31190480702264,10.1436962105772,11.2008230314923,14.5464365375719,13.9570281581734,24.9784321640816,53.1396532726568,94.0422379769835,73.7915040252367,56.0295465194711,5.83957870006329,8.84515478009414,8.99448449539415,9.94014594803664,15.6765153839071,13.2405442926338,11.5078454980324,12.6465476884528,27.1815799056201,18.6898668485561,22.3284568601102,31.5158049845706,47.9899868099512,43.5935714858247,55.4810049567872,0.369506380333209,7.39016505904891,4.4000543639347,4.07388205860452,3.75504397261603,1.67506257441816,1.90434912708811,1.56106918286239,2.04925687338048,1.10732344824387,0.797273843287435,0.655453258862952,0.863424909329478,0.578596234326046,0,0,2.95058563811422,2.20749397043786,4.17431533968259,4.68846746368813,3.60656879828686,0.504941854408746,2.2085575359138,2.73307121007647,1.72338718186239,1.43381278771531,2.89638276307112,1.13230612315533,4.04810701674894,2.04579100537918,3.16230222357219,0.642642632843614,1.98716119291576,6.58842733568844,3.58351310577867,2.63952196756057,5.30980553359851,4.85561272309963,10.5813244937663,6.03536255218874,2.65771703592696,3.68922177532713,6.71913562237375,4.72593848320757,7.12994756769443,5.68866164284469,4.21674434299995,3.09406629744561,3.40439605753788,2.52085531643834,4.65691261617916,3.85806663056866,1.95074257006501,4.10248280484762,5.10101963866575,10.3518082698964,2.58138878870081,0.63549621259146,1.10264199027481,0.8244312647074,1.61464426695906,1.68876189798836,2.38744688006273,1.96969079694074,44.888048840997,6.30446026835733,0.683483523191411,2.47664241555867,1.66675074632741,1.50694765603753,0.820165366326151,1.37266903923914,4.75939603982795,4.47844647435706,4.69879910935041,6.68269432610579,5.69404788446044,4.47302827679067,5.83228840437727,4.18176592028937,5.02233896616208,5.12484516262319,7.60411792673091,8.37619014348895,14.387262035389,0.621339313086926,1.12738587736838,9.8680920389026,8.93475848468327,8.5558522871381,8.39538852605252,6.58928889414035,4.81164678447591,7.16124116641726,5.03324853243412,1.44950472495604,1.72818003754719,0.948033361884535,6.48720688928525,3.80030541509861,2.20865399062252,1.43221356533985,1.58945083825012,1.08175904567972,0.886137163047463,0.908698049533329,1.143102099825,0.504130925684203,0.487289403698762,0.384847366561318,0.233753804363138,2.0405734525369,4.21773311410723,6.54911153249173,3.02192309455341,1.73870634628971,1.87682475451182,1.28206136987086,0.643105137237198,2.50786052017682,0.564751842617067,1.38097570952153,0.572895513439397,0.515559547031063,0.685082519770642,1.5107877947794,0.675022500231806,0.900642406448441,0.906284817968409,1.55328093525546,3.63255716544618,2.79317411380722,2.56100408631201,5.10524105843418,7.96530017986333,4.59608771125035,3.11145418922261,4.73880631649457,2.56735367673452,3.53776096469316,3.29523089857312,4.33840585187975,4.58843386602424,4.48176066834085,4.82457939227151,1.90517476513229,4.28772005995965,3.08654752741928,1.23625770240992,3.53277408322554,5.14303878578123,5.85670160325814,4.76872379894642,2.90692833264657,4.04670335785922,4.23073039458383,3.65855945745545,4.20911538300549,4.48153575691344,6.17256498823512,3.55905054372522,3.94017929502254,4.50154147486658,4.33823155320705,4.82266527452853,3.49734809113124,2.57324769289949,4.51229213501426,2.29545998482612,2.64709702943419,2.78241402744506
|phase1_expression=5.2849119544582,242.537908309356,214.759640991861,296.112462869387,390.698669358151,29.8825104003164,29.4351927150362,1.54947988129892,5.77233760821834,5.85161315804984,3.4243593645101,8.53562101250099,0.856003649656029,0.961624426608971,1.33243904726265,0.404950534779652,1.39912375625629,1.57731082679119,1.64537320326887,0.42438965179803,52.9819697641165,5.56029326724958,6.52999472847338,44.4778935365671,50.4700418347774,240.028961000078,164.551082532767,108.166558808316,89.5010305639521,121.730552674047,40.7984139605761,26.0362576118449,20.9122027778754,0,29.46286521463,38.8989070138872,31.4420808644048,1.25559489221072,3.1253413780952,0,0,0,0,4.78407908307194,4.8660926985367,3.30384153891027,14.0830441982647,4.79655344036982,7.90870257844099,4.47188767870852,5.87942970826523,14.3752564364972,1.17447824240415,1.45072428402269,1.68046899571232,7.20326420900652,5.44413535883638,3.6097046459421,1.82084814773638,1.5869729378161,1.26766280701236,18.6364492638023,6.22506357277798,0,2.96659908770092,1.4209602298922,3.59520132622086,6.91592949578798,2.7996195323289,2.29510095163874,2.73422449756797,3.14216082844184,3.09215957332259,2.32732518508413,1.62937300731002,0,6.60695285996332,3.57524546638526,6.45147439676223,1.84640802822271,0.640413505216868,2.6045668527838,5.58365998002762,3.93933827022176,3.66715794664344,3.24091444021034,2.13557521198654,1.4911955666024,4.54357159999104,5.36558076758177,3.76823835312181,31.8356834483113,45.5580793584193,56.6688351219708,39.6363614643078,29.5697745484241,43.3973258207113,2.89731548382698,3.89679006904303,2.12003744706204,5.0703631119605,1.28326477414318,2.54805239706646,0,3.46385665617943,2.78695852022608,2.52762222507392,80.042899683061,0.258937883647172,1.92974780784272,6.7659277438793,5.1759131313064,6.22661842591358,3.91878865436819,2.4693628498498,1.88499886994513,14.8316980640624,1.01219549843938,0.884610551949874,1.7794353494215,1.32504911076236,2.42437626567611,9.31958806090611,2.34224637609238,2.30391377494801,75.3598312865345,8.8663192134381,7.19883277192089,9.02198612218759,2.69623150928681,3.20250421973039,0.879580464790051,0.869121600961382,1.53429274398198,1.24672826735736,1.78465389374533,5.19380755636613,2.48813941220186,6.31806896084187,0.631325567659422,4.81445638962004,5.0578462975364,4.14142898552303,3.76762044589288,1.97305847538851,2.69038812598185,1.87403449119458,1.03481348295606,3.23351989399263,3.21480336285293,3.16712023495108,3.5071317188412,5.00485048606076,4.52727816478817,1.64625709126355,7.36426787228425,5.61770549850588,7.46308930632674,7.38825098428541,2.48550927042602,1.87620847984877,3.6012412292203,1.89395788468168,3.14822770795846,2.93107514486019,3.72054311600653,4.29237442239391,4.32031766758527,2.79751744852917,3.77585167381919,4.53985333456792,4.82459958503597,5.48875288227627,3.22095405024892,0.630869845692382,1.02904612379284,82.2742769629657,138.836547498361,5.75878276445132,3.94802342162745,4.89696353023955,6.85723983719365,12.6755484991576,12.7451169495415,64.5359523700536,21.9049609782934,15.5827829456167,12.7332142106337,15.9870551437679,50.3338868846364,66.3543813115311,89.6135729644652,11.0007382552787,7.31190480702264,10.1436962105772,11.2008230314923,14.5464365375719,13.9570281581734,24.9784321640816,53.1396532726568,94.0422379769835,73.7915040252367,56.0295465194711,5.83957870006329,8.84515478009414,8.99448449539415,9.94014594803664,15.6765153839071,13.2405442926338,11.5078454980324,12.6465476884528,27.1815799056201,18.6898668485561,22.3284568601102,31.5158049845706,47.9899868099512,43.5935714858247,55.4810049567872,0.369506380333209,7.39016505904891,4.4000543639347,4.07388205860452,3.75504397261603,1.67506257441816,1.90434912708811,1.56106918286239,2.04925687338048,1.10732344824387,0.797273843287435,0.655453258862952,0.863424909329478,0.578596234326046,0,0,2.95058563811422,2.20749397043786,4.17431533968259,4.68846746368813,3.60656879828686,0.504941854408746,2.2085575359138,2.73307121007647,1.72338718186239,1.43381278771531,2.89638276307112,1.13230612315533,4.04810701674894,2.04579100537918,3.16230222357219,0.642642632843614,1.98716119291576,6.58842733568844,3.58351310577867,2.63952196756057,5.30980553359851,4.85561272309963,10.5813244937663,6.03536255218874,2.65771703592696,3.68922177532713,6.71913562237375,4.72593848320757,7.12994756769443,5.68866164284469,4.21674434299995,3.09406629744561,3.40439605753788,2.52085531643834,4.65691261617916,3.85806663056866,1.95074257006501,4.10248280484762,5.10101963866575,10.3518082698964,2.58138878870081,0.63549621259146,1.10264199027481,0.8244312647074,1.61464426695906,1.68876189798836,2.38744688006273,1.96969079694074,44.888048840997,6.30446026835733,0.683483523191411,2.47664241555867,1.66675074632741,1.50694765603753,0.820165366326151,1.37266903923914,4.75939603982795,4.47844647435706,4.69879910935041,6.68269432610579,5.69404788446044,4.47302827679067,5.83228840437727,4.18176592028937,5.02233896616208,5.12484516262319,7.60411792673091,8.37619014348895,14.387262035389,0.621339313086926,1.12738587736838,9.8680920389026,8.93475848468327,8.5558522871381,8.39538852605252,6.58928889414035,4.81164678447591,7.16124116641726,5.03324853243412,1.44950472495604,1.72818003754719,0.948033361884535,6.48720688928525,3.80030541509861,2.20865399062252,1.43221356533985,1.58945083825012,1.08175904567972,0.886137163047463,0.908698049533329,1.143102099825,0.504130925684203,0.487289403698762,0.384847366561318,0.233753804363138,2.0405734525369,4.21773311410723,6.54911153249173,3.02192309455341,1.73870634628971,1.87682475451182,1.28206136987086,0.643105137237198,2.50786052017682,0.564751842617067,1.38097570952153,0.572895513439397,0.515559547031063,0.685082519770642,1.5107877947794,0.675022500231806,0.900642406448441,0.906284817968409,1.55328093525546,3.63255716544618,2.79317411380722,2.56100408631201,5.10524105843418,7.96530017986333,4.59608771125035,3.11145418922261,4.73880631649457,2.56735367673452,3.53776096469316,3.29523089857312,4.33840585187975,4.58843386602424,4.48176066834085,4.82457939227151,1.90517476513229,4.28772005995965,3.08654752741928,1.23625770240992,3.53277408322554,5.14303878578123,5.85670160325814,4.76872379894642,2.90692833264657,4.04670335785922,4.23073039458383,3.65855945745545,4.20911538300549,4.48153575691344,6.17256498823512,3.55905054372522,3.94017929502254,4.50154147486658,4.33823155320705,4.82266527452853,3.49734809113124,2.57324769289949,4.51229213501426,2.29545998482612,2.64709702943419,2.78241402744506
|short_description=p1@Acy1
}}
}}

Revision as of 02:00, 19 April 2012

Short description:p1@Acy1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Acy1_5end
Coexpression cluster:NA
Association with transcript: 37bp_to_ENSMUST00000024031, NM_025371, uc009rjp.1_5end
EntrezGene:Acy1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Acy1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5242.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6214.76
CD326+ enterocyte, pool1.CNhs13542.11848-124I3296.11
CD326+ enterocyte, pool2.CNhs13197.11849-124I4390.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I729.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I829.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.54
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A352.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D144.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D250.47
GP2+ M cell, pool1.CNhs13228.11845-124H9240.03
GP2+ M cell, pool2.CNhs13231.11846-124I1164.55
GP2+ M cell, pool3.CNhs13240.11847-124I2108.17
Ileum epithelium, pool1.CNhs13199.10252-104B989.50
Ileum epithelium, pool2.CNhs13232.10253-104C1121.73
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C840.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I326.04
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F529.46
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F638.90
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F731.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.80
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.91
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.88
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.20
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C618.64
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D94.54
Mouse Schwann, donor2.CNhs12573.11746-123F95.37
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F731.84
Mouse hepatocyte, donor1.CNhs13078.11714-123C445.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C856.67
Mouse hepatocyte, donor6.CNhs13090.11822-124F439.64
Mouse hepatocyte, donor8.CNhs13091.11824-124F629.57
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A743.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B680.04
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C56.77
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F53.92
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A814.83
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H775.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.02
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.19
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B26.32
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C94.14
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E23.23
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I67.36
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.46
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.39
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E34.32
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G14.54
heart, neonate N20.CNhs11127.821-26I64.82
heart, neonate N25.CNhs11196.1351-25D35.49
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I382.27
intestine, adult.CNhs10496.178-9A3138.84
intestine, embryo E12.CNhs11019.1251-16I55.76
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H46.86
intestine, embryo E17.CNhs10582.482-18D312.68
intestine, embryo E18.CNhs10526.1289-20F712.75
intestine, neonate N00.CNhs11126.644-26D164.54
intestine, neonate N01.CNhs11192.1322-23E921.90
intestine, neonate N06.CNhs11102.688-20B815.58
intestine, neonate N07.CNhs11095.720-20F212.73
intestine, neonate N10.CNhs11098.755-23A515.99
intestine, neonate N20.CNhs11187.827-18D150.33
intestine, neonate N25.CNhs11121.1352-25E366.35
intestine, neonate N30.CNhs11131.1384-42G189.61
kidney, embryo E14.CNhs10606.411-4I911.00
kidney, embryo E15.CNhs10997.434-16F87.31
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I211.20
kidney, embryo E18.CNhs11001.1288-20C714.55
kidney, neonate N00.CNhs11214.646-21G713.96
kidney, neonate N10.CNhs11206.758-6D524.98
kidney, neonate N20.CNhs11113.832-19I153.14
kidney, neonate N25.CNhs11122.1353-25F394.04
kidney, neonate N30.CNhs11203.1385-42H173.79
liver, adult pregnant day01.CNhs10466.508-5B256.03
liver, embryo E12.CNhs10601.355-15F85.84
liver, embryo E13.CNhs10524.378-3H68.85
liver, embryo E14.CNhs10594.409-16E18.99
liver, embryo E15.CNhs10520.433-16D79.94
liver, embryo E16.CNhs10523.462-17F515.68
liver, embryo E17.CNhs10510.481-18A313.24
liver, embryo E18.CNhs10579.499-43G411.51
liver, neonate N00.CNhs11117.641-24F412.65
liver, neonate N03.CNhs11123.1345-25G227.18
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H222.33
liver, neonate N10.CNhs11115.751-24B931.52
liver, neonate N20.CNhs11220.823-25A347.99
liver, neonate N25.CNhs11198.1368-26H143.59
liver, neonate N30.CNhs11106.1382-42D155.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G27.39
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H76.59
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F210.58
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G96.72
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F64.10
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E910.35
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I144.89
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.70
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E35.69
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D45.83
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B85.12
stomach, neonate N07.CNhs11210.718-18A97.60
stomach, neonate N25.CNhs11104.1355-25E48.38
stomach, neonate N30.CNhs11134.1386-42I114.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F59.87
testis, embryo E15.CNhs11034.443-27C58.93
testis, embryo E16.CNhs11033.470-26G58.56
testis, embryo E17.CNhs11029.486-18I58.40
testis, embryo E18.CNhs11027.503-18G56.59
testis, neonate N00.CNhs11189.1300-22B74.81
testis, neonate N07.CNhs11222.726-26I47.16
testis, neonate N10.CNhs11204.763-44D95.03
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I46.49
thymus, embryo E15.CNhs11005.430-45I23.80
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.55
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I83.63
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B17.97
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:106340500..106340529,-&oldid=999399"