FFCP PHASE1:Mm9::chr7:112936020..112936037,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=233651 | |EntrezGene=233651 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=E9PVD3 | |UniProt=E9PVD3 | ||
|association_with_transcript=26bp_to_ENSMUST00000078482,NM_001162943,uc009izh.2,uc009izk.2_5end | |association_with_transcript=26bp_to_ENSMUST00000078482,NM_001162943,uc009izh.2,uc009izk.2_5end | ||
|cluster_id=chr7:112936020..112936037,- | |||
|description=CAGE_peak_2_at_Dchs1_5end | |description=CAGE_peak_2_at_Dchs1_5end | ||
|id=chr7:112936020..112936037,- | |id=chr7:112936020..112936037,- | ||
|ontology_enrichment_celltype=CL:0000540!2.73e-10!33;CL:0000047!2.73e-10!33;CL:0000031!2.73e-10!33;CL:0000404!2.73e-10!33;CL:0000393!5.77e-10!39;CL:0000211!5.77e-10!39;CL:0000117!1.90e-09!23;CL:0000337!1.90e-09!23;CL:0000221!7.14e-09!44;CL:0000133!7.14e-09!44;CL:0000055!7.32e-09!50;CL:0002319!9.70e-09!43 | |ontology_enrichment_celltype=CL:0000540!2.73e-10!33;CL:0000047!2.73e-10!33;CL:0000031!2.73e-10!33;CL:0000404!2.73e-10!33;CL:0000393!5.77e-10!39;CL:0000211!5.77e-10!39;CL:0000117!1.90e-09!23;CL:0000337!1.90e-09!23;CL:0000221!7.14e-09!44;CL:0000133!7.14e-09!44;CL:0000055!7.32e-09!50;CL:0002319!9.70e-09!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.40e-11,23;CL:0000337,1.40e-11,23;CL:0000540,1.68e-11,33;CL:0000047,1.68e-11,33;CL:0000031,1.68e-11,33;CL:0000404,1.68e-11,33;CL:0002319,4.75e-10,43;CL:0000221,1.23e-09,44;CL:0000133,1.23e-09,44;CL:0000393,2.02e-09,39;CL:0000211,2.02e-09,39;CL:0002609,1.58e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.41e-09!73;UBERON:0005743!3.41e-09!73;UBERON:0000468!2.40e-08!333;UBERON:0000073!2.75e-08!75;UBERON:0001016!2.75e-08!75;UBERON:0002346!5.34e-08!71;UBERON:0003075!5.34e-08!71;UBERON:0007284!5.34e-08!71;UBERON:0004121!2.32e-07!102;UBERON:0000924!2.32e-07!102;UBERON:0006601!2.32e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.97e-08,73;UBERON:0001016,9.08e-08,75 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.917733760808408,3.9119567217402,0.65407546914134,0,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0.771778308107841,1.14613375975503,0,5.05791152148994,3.70293685490423,3.1691570175309,1.0165335962074,2.66788438833342,0,0,0,0.299600110518405,1.53687322128622,3.00699875694585,2.56511282830212,3.36519938162211,0.571301968807607,1.54607978666129,3.91970557487853,2.77951865952885,1.83843757322004,0,0.510749352340751,0.768032666281217,3.69281605644543,4.94033275453012,5.73004707612436,1.11673199600552,0.56276261003168,0.763991238884051,2.35702868378934,1.70846016958924,2.98239113320481,0,0,1.15945795480671,0.860423876981386,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0.517875767294343,0.29688427812965,0.867426633830679,1.21786191324856,1.15307748628029,0.301445281105245,0.705532242814229,0.125666591329675,0,0.144599356919912,0,0.808834249737046,0.662524555381181,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.748953197024114,0,2.38743269014442,0.695297280769106,0.255715457330331,0.41557608911912,0.973447578406546,1.93494791315601,0.124406970610093,0.252722758433675,0.210441855886474,1.69156575851515,0.689706313300419,0.720248519221397,1.05493372485001,0.95251098811859,0.640568601424249,1.03071897015702,0.776110112217047,1.72454394346274,1.32374256117473,1.93546236580344,3.28793598641362,1.94633074457919,1.39300866608867,0.411564272815887,2.38841120182192,0,0,0,0.621377317606506,0.703578179943289,0.900310307305074,0.473489471170421,0.393528463494808,1.23413690309903,0.232533944750408,0.536546802799238,0.467061369468678,0.987359099480883,1.47750717671186,0.243206428637567,0.584799949701329,0.219550115291051,0.536825675041487,0.210289948564127,3.19004298375782,0,0,1.2797295032114,2.09013004674395,0.902072229254653,0.605050573870028,0.444756087689741,0.951128130562796,0.949058123089023,1.4822905925161,0,1.1937388322469,0.38992817423824,0.898819408654221,0,0.199141273254367,0.758671603812327,1.25673363870702,1.1270773567308,1.4255592949172,1.16371492300575,1.47285221769669,1.07502113111237,0,0.156998727841375,0.370191491765402,0,0.333690211432188,0.589676985339609,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0,0,0,0,0.739012760666419,1.32643988239339,0.977789858652155,1.52770577197669,0.704070744865506,0.167506257441816,0.714130922658041,1.75620283072019,0.945810864637146,0.44292937929755,0.478364305972461,0.163863314715738,0.690739927463582,0.578596234326046,0,0,0,0,0.160550589987792,0.234423373184406,0,0.757412781613119,2.83957397474631,0.390438744296638,1.72338718186239,0.238968797952552,0.222798674082394,0.566153061577665,1.21443210502468,1.16902343164525,0.790575555893047,1.60660658210904,0.283880170416537,1.06839362200353,2.44330439030364,0.989820737835213,0,0.971122544619926,0.302323556964751,0.377210159511796,0.590603785761546,0,1.03371317267288,0.727067458955011,0,0,1.05418608574999,1.03135543248187,0.340439605753788,1.44048875225048,2.06973894052407,1.71469628025274,1.06404140185364,0.356737635204141,0.987294123612726,1.8267896946876,0.23467170806371,0.21183207086382,0,0,0.484393280087717,0.301564624640779,0.119372344003136,0.328281799490123,0,0.370850604021019,0.170870880797853,1.03193433981611,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,1.26534397432454,2.03319467126849,0.756037385752609,1.04544148007234,0.218362563746178,0.674321731924103,0.41326727862668,0,0.129614973291793,0,0,0.448549638131936,1.15820943319968,0.388902376688095,1.29159823477731,0.506868376472335,2.22978753426933,0.39061315453185,0.419437377702843,0.241584120826006,0,0,0.810900861160657,0.205421914329655,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0.579568782096571,0.375364950902364,1.64836461840539,0.428736758158132,0.501572104035363,0,1.84130094602871,0,0.68741272937475,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.830298780673413,3.59122386060928,2.90247129782028,0.729320151204882,0.209613162627982,0.551530525350042,2.00022055021454,0.824140228955577,0.962757628775446,0.252697211763798,1.2673964994512,1.50901073108861,0.561849044819294,1.02440243847791,0.574354689556133,1.42888107384922,0.811190281613988,0.578727661391115,2.06042950401653,2.06078488188156,1.71434626192708,1.59728225543404,1.43061713968393,0.726732083161643,0.846984423737976,1.26921911837515,0.548783918618318,1.8414879800649,0.950628796921032,0,0.830445126869219,0.788035859004508,1.22769312950907,1.08455788830176,1.35034627686799,1.99848462350357,1.87145286756327,0.859484216193193,0.765153328275374,1.76473135295612,0.463735671240843 | |phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0.917733760808408,3.9119567217402,0.65407546914134,0,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0.771778308107841,1.14613375975503,0,5.05791152148994,3.70293685490423,3.1691570175309,1.0165335962074,2.66788438833342,0,0,0,0.299600110518405,1.53687322128622,3.00699875694585,2.56511282830212,3.36519938162211,0.571301968807607,1.54607978666129,3.91970557487853,2.77951865952885,1.83843757322004,0,0.510749352340751,0.768032666281217,3.69281605644543,4.94033275453012,5.73004707612436,1.11673199600552,0.56276261003168,0.763991238884051,2.35702868378934,1.70846016958924,2.98239113320481,0,0,1.15945795480671,0.860423876981386,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0.517875767294343,0.29688427812965,0.867426633830679,1.21786191324856,1.15307748628029,0.301445281105245,0.705532242814229,0.125666591329675,0,0.144599356919912,0,0.808834249737046,0.662524555381181,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.748953197024114,0,2.38743269014442,0.695297280769106,0.255715457330331,0.41557608911912,0.973447578406546,1.93494791315601,0.124406970610093,0.252722758433675,0.210441855886474,1.69156575851515,0.689706313300419,0.720248519221397,1.05493372485001,0.95251098811859,0.640568601424249,1.03071897015702,0.776110112217047,1.72454394346274,1.32374256117473,1.93546236580344,3.28793598641362,1.94633074457919,1.39300866608867,0.411564272815887,2.38841120182192,0,0,0,0.621377317606506,0.703578179943289,0.900310307305074,0.473489471170421,0.393528463494808,1.23413690309903,0.232533944750408,0.536546802799238,0.467061369468678,0.987359099480883,1.47750717671186,0.243206428637567,0.584799949701329,0.219550115291051,0.536825675041487,0.210289948564127,3.19004298375782,0,0,1.2797295032114,2.09013004674395,0.902072229254653,0.605050573870028,0.444756087689741,0.951128130562796,0.949058123089023,1.4822905925161,0,1.1937388322469,0.38992817423824,0.898819408654221,0,0.199141273254367,0.758671603812327,1.25673363870702,1.1270773567308,1.4255592949172,1.16371492300575,1.47285221769669,1.07502113111237,0,0.156998727841375,0.370191491765402,0,0.333690211432188,0.589676985339609,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0,0,0,0,0.739012760666419,1.32643988239339,0.977789858652155,1.52770577197669,0.704070744865506,0.167506257441816,0.714130922658041,1.75620283072019,0.945810864637146,0.44292937929755,0.478364305972461,0.163863314715738,0.690739927463582,0.578596234326046,0,0,0,0,0.160550589987792,0.234423373184406,0,0.757412781613119,2.83957397474631,0.390438744296638,1.72338718186239,0.238968797952552,0.222798674082394,0.566153061577665,1.21443210502468,1.16902343164525,0.790575555893047,1.60660658210904,0.283880170416537,1.06839362200353,2.44330439030364,0.989820737835213,0,0.971122544619926,0.302323556964751,0.377210159511796,0.590603785761546,0,1.03371317267288,0.727067458955011,0,0,1.05418608574999,1.03135543248187,0.340439605753788,1.44048875225048,2.06973894052407,1.71469628025274,1.06404140185364,0.356737635204141,0.987294123612726,1.8267896946876,0.23467170806371,0.21183207086382,0,0,0.484393280087717,0.301564624640779,0.119372344003136,0.328281799490123,0,0.370850604021019,0.170870880797853,1.03193433981611,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,1.26534397432454,2.03319467126849,0.756037385752609,1.04544148007234,0.218362563746178,0.674321731924103,0.41326727862668,0,0.129614973291793,0,0,0.448549638131936,1.15820943319968,0.388902376688095,1.29159823477731,0.506868376472335,2.22978753426933,0.39061315453185,0.419437377702843,0.241584120826006,0,0,0.810900861160657,0.205421914329655,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0.579568782096571,0.375364950902364,1.64836461840539,0.428736758158132,0.501572104035363,0,1.84130094602871,0,0.68741272937475,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.830298780673413,3.59122386060928,2.90247129782028,0.729320151204882,0.209613162627982,0.551530525350042,2.00022055021454,0.824140228955577,0.962757628775446,0.252697211763798,1.2673964994512,1.50901073108861,0.561849044819294,1.02440243847791,0.574354689556133,1.42888107384922,0.811190281613988,0.578727661391115,2.06042950401653,2.06078488188156,1.71434626192708,1.59728225543404,1.43061713968393,0.726732083161643,0.846984423737976,1.26921911837515,0.548783918618318,1.8414879800649,0.950628796921032,0,0.830445126869219,0.788035859004508,1.22769312950907,1.08455788830176,1.35034627686799,1.99848462350357,1.87145286756327,0.859484216193193,0.765153328275374,1.76473135295612,0.463735671240843 | ||
|short_description=p2@Dchs1 | |short_description=p2@Dchs1 | ||
}} | }} |
Latest revision as of 16:44, 25 September 2015
Short description: | p2@Dchs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dchs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 26bp_to_ENSMUST00000078482, NM_001162943, uc009izh.2, uc009izk.2_5end |
EntrezGene: | Dchs1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.40e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.40e-11 | 23 |
neuron | 1.68e-11 | 33 |
neuronal stem cell | 1.68e-11 | 33 |
neuroblast | 1.68e-11 | 33 |
electrically signaling cell | 1.68e-11 | 33 |
neural cell | 4.75e-10 | 43 |
ectodermal cell | 1.23e-09 | 44 |
neurectodermal cell | 1.23e-09 | 44 |
electrically responsive cell | 2.02e-09 | 39 |
electrically active cell | 2.02e-09 | 39 |
neuron of cerebral cortex | 1.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.97e-08 | 73 |
nervous system | 9.08e-08 | 75 |