FFCP PHASE1:Mm9::chr7:117917364..117917376,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11717 | |EntrezGene=11717 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D3YU73 | |UniProt=D3YU73 | ||
|association_with_transcript=-381bp_to_ENSMUST00000147587_5end | |association_with_transcript=-381bp_to_ENSMUST00000147587_5end | ||
|cluster_id=chr7:117917364..117917376,+ | |||
|description=CAGE_peak_6_at_Ampd3_5end | |description=CAGE_peak_6_at_Ampd3_5end | ||
|id=chr7:117917364..117917376,+ | |id=chr7:117917364..117917376,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.30e-10,8;CL:0000128,4.40e-08,6;CL:0000126,4.40e-08,6;CL:0000127,4.40e-08,6;CL:0000333,4.63e-08,10;CL:0000095,4.63e-08,10;CL:0000243,4.63e-08,10;CL:0000123,4.63e-08,10;CL:0000125,4.63e-08,10;CL:0000030,4.63e-08,10;CL:0000339,4.63e-08,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!1.65e-10!26;UBERON:0000990!1.65e-10!26;UBERON:0003133!1.63e-09!24;UBERON:0000991!6.88e-08!18;UBERON:0005564!6.88e-08!18;UBERON:0000073!7.44e-08!75;UBERON:0001016!7.44e-08!75;UBERON:0004176!8.38e-08!17;UBERON:0009196!8.38e-08!17;UBERON:0009117!8.38e-08!17;UBERON:0001017!1.22e-07!73;UBERON:0005743!1.22e-07!73;UBERON:0001049!1.25e-07!52;UBERON:0005068!1.25e-07!52;UBERON:0006241!1.25e-07!52;UBERON:0007135!1.25e-07!52;UBERON:0002346!2.36e-07!71;UBERON:0003075!2.36e-07!71;UBERON:0007284!2.36e-07!71;UBERON:0004121!5.14e-07!102;UBERON:0000924!5.14e-07!102;UBERON:0006601!5.14e-07!102;UBERON:0003101!6.00e-07!16;UBERON:0000079!6.00e-07!16;UBERON:0003064!8.21e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,4.23e-12,26;UBERON:0000990,4.23e-12,26;UBERON:0003133,1.72e-10,24;UBERON:0003064,3.81e-09,14;UBERON:0004176,6.82e-09,17;UBERON:0009196,6.82e-09,17;UBERON:0009117,6.82e-09,17;UBERON:0000991,3.30e-08,18;UBERON:0005564,3.30e-08,18;UBERON:0002369,1.27e-07,7;UBERON:0006858,1.27e-07,7;UBERON:0003101,1.44e-07,16;UBERON:0000079,1.44e-07,16;UBERON:0003135,4.67e-07,15 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,1.39912375625629,0,0,0,1.61582251287033,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,2.92972141515835,0,0.523523743973798,0.588231488031014,0,0,0.755380907853464,0.304130793658544,0.183546752161682,2.34717403304412,6.5407546914134,1.97717564461025,2.3331587888914,3.91961980551015,2.87505128729943,0,0,0,16.2073444702647,14.6132054368766,5.67239301505187,0,0,0,1.0165335962074,0,1.3498495759221,0,0,4.79360176829448,6.91592949578798,0,0.135005938331691,0,2.28520787523043,1.98781686856452,0.367472397644862,0,0,0,1.0214987046815,1.68967186581868,0.527545150920775,0,0.52091337055676,0.279182999001381,0,1.22238598221448,2.06240009831567,0.711858403995515,0,0.227178579999552,0.982430281388212,0.289864488701678,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0.517875767294343,2.67195850316685,1.04091196059682,2.74018930480927,2.30615497256059,2.11011696773672,1.99900802130698,1.38233250462643,0.741584903203122,1.73519228303894,1.76922110389975,0,0.662524555381181,0,0,0.878342391034642,0.41889341362691,0,0,0,0,1.79748767285787,2.28750301409313,0.753926112677186,0.869121600961382,1.79000820131231,1.45451631191692,2.43361894601636,2.54598409625791,0.995255764880744,1.26361379216837,0,0,0,0,0.150704817835715,0,0,0,0.517406741478031,0,0,0,0,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0.324275238183423,0.146199987425332,0.439100230582101,0.536825675041487,1.26173969138476,0.514523061896422,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0.597423819763102,0,0.342745537829186,0,0.407302655690628,0.387904974335251,0.911765658574141,1.26473074248515,1.91893192373483,2.04098346193787,1.85095745882701,0,0.83422552858047,1.17935397067922,0.899448449539415,1.42002084971952,2.17059443777175,1.78238096246994,1.72617682470486,0.810676133875177,0.549122826376163,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0,0,0.163863314715738,0,0.289298117163023,3.01582567878545,2.17562273527484,0,0,1.44495530989013,4.57125577709592,0.163934945376675,0.504941854408746,0.315508219416257,0,1.07711698866399,0,0.891194696329576,0,0,0.292255857911312,0.395287777946524,0.642642632843614,3.54850213020672,1.42452482933804,1.79175655288934,6.92874516484649,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0.680879211507576,0.36012218806262,0,0.428674070063185,1.24138163549592,1.42695054081656,0.822745103010605,2.74018454203139,0.938686832254841,0,1.10264199027481,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.656563598980245,0,2.41052892613663,0.683483523191411,0.412773735926445,0.925972636848558,1.69531611304222,1.77702496037333,1.37266903923914,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.41326727862668,0,0.129614973291793,0,1.12738587736838,0.299033092087958,0.992750942742586,2.91676782516071,2.0665571756437,3.71703476079712,3.40335992072686,1.69265700297135,1.57289016638566,1.69108884578204,0.288030006257865,0.316011120628178,1.21635129174099,0,0.25984164595559,0,0.198681354781265,0,0.295379054349154,0,0.0762068066549998,0.201652370273681,0,0,0,0.453460767230423,0,0,0.167884616364078,0.19318959403219,6.38120416534019,8.97442958909599,2.35805216986972,1.00314420807073,1.12950368523413,1.38097570952153,1.71868654031819,1.54667864109319,0.685082519770642,0.755393897389701,0,0.900642406448441,0.453142408984205,0,0,0,0.341467211508268,0.243106717068294,0.419226325255965,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,0.842773567228942,0.320125762024346,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.685738504770831,0,0.238436189947321,0.436039249896986,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.197008964751127,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0.661774257358546,0.695603506861264 | |phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0.809901069559304,1.39912375625629,0,0,0,1.61582251287033,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,2.92972141515835,0,0.523523743973798,0.588231488031014,0,0,0.755380907853464,0.304130793658544,0.183546752161682,2.34717403304412,6.5407546914134,1.97717564461025,2.3331587888914,3.91961980551015,2.87505128729943,0,0,0,16.2073444702647,14.6132054368766,5.67239301505187,0,0,0,1.0165335962074,0,1.3498495759221,0,0,4.79360176829448,6.91592949578798,0,0.135005938331691,0,2.28520787523043,1.98781686856452,0.367472397644862,0,0,0,1.0214987046815,1.68967186581868,0.527545150920775,0,0.52091337055676,0.279182999001381,0,1.22238598221448,2.06240009831567,0.711858403995515,0,0.227178579999552,0.982430281388212,0.289864488701678,0,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0.517875767294343,2.67195850316685,1.04091196059682,2.74018930480927,2.30615497256059,2.11011696773672,1.99900802130698,1.38233250462643,0.741584903203122,1.73519228303894,1.76922110389975,0,0.662524555381181,0,0,0.878342391034642,0.41889341362691,0,0,0,0,1.79748767285787,2.28750301409313,0.753926112677186,0.869121600961382,1.79000820131231,1.45451631191692,2.43361894601636,2.54598409625791,0.995255764880744,1.26361379216837,0,0,0,0,0.150704817835715,0,0,0,0.517406741478031,0,0,0,0,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0.324275238183423,0.146199987425332,0.439100230582101,0.536825675041487,1.26173969138476,0.514523061896422,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0.597423819763102,0,0.342745537829186,0,0.407302655690628,0.387904974335251,0.911765658574141,1.26473074248515,1.91893192373483,2.04098346193787,1.85095745882701,0,0.83422552858047,1.17935397067922,0.899448449539415,1.42002084971952,2.17059443777175,1.78238096246994,1.72617682470486,0.810676133875177,0.549122826376163,0,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0,0,0.163863314715738,0,0.289298117163023,3.01582567878545,2.17562273527484,0,0,1.44495530989013,4.57125577709592,0.163934945376675,0.504941854408746,0.315508219416257,0,1.07711698866399,0,0.891194696329576,0,0,0.292255857911312,0.395287777946524,0.642642632843614,3.54850213020672,1.42452482933804,1.79175655288934,6.92874516484649,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0.680879211507576,0.36012218806262,0,0.428674070063185,1.24138163549592,1.42695054081656,0.822745103010605,2.74018454203139,0.938686832254841,0,1.10264199027481,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.656563598980245,0,2.41052892613663,0.683483523191411,0.412773735926445,0.925972636848558,1.69531611304222,1.77702496037333,1.37266903923914,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.41326727862668,0,0.129614973291793,0,1.12738587736838,0.299033092087958,0.992750942742586,2.91676782516071,2.0665571756437,3.71703476079712,3.40335992072686,1.69265700297135,1.57289016638566,1.69108884578204,0.288030006257865,0.316011120628178,1.21635129174099,0,0.25984164595559,0,0.198681354781265,0,0.295379054349154,0,0.0762068066549998,0.201652370273681,0,0,0,0.453460767230423,0,0,0.167884616364078,0.19318959403219,6.38120416534019,8.97442958909599,2.35805216986972,1.00314420807073,1.12950368523413,1.38097570952153,1.71868654031819,1.54667864109319,0.685082519770642,0.755393897389701,0,0.900642406448441,0.453142408984205,0,0,0,0.341467211508268,0.243106717068294,0.419226325255965,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.565879024158229,0.842773567228942,0.320125762024346,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.685738504770831,0,0.238436189947321,0.436039249896986,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.197008964751127,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0.661774257358546,0.695603506861264 | ||
|short_description=p6@Ampd3 | |short_description=p6@Ampd3 | ||
}} | }} |
Latest revision as of 17:37, 25 September 2015
Short description: | p6@Ampd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ampd3_5end |
Coexpression cluster: | NA |
Association with transcript: | -381bp_to_ENSMUST00000147587_5end |
EntrezGene: | Ampd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.30e-10 | 8 |
oligodendrocyte | 4.40e-08 | 6 |
macroglial cell | 4.40e-08 | 6 |
astrocyte | 4.40e-08 | 6 |
migratory neural crest cell | 4.63e-08 | 10 |
neuron associated cell | 4.63e-08 | 10 |
glial cell (sensu Vertebrata) | 4.63e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 4.63e-08 | 10 |
glial cell | 4.63e-08 | 10 |
glioblast | 4.63e-08 | 10 |
glioblast (sensu Vertebrata) | 4.63e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 4.23e-12 | 26 |
reproductive system | 4.23e-12 | 26 |
reproductive organ | 1.72e-10 | 24 |
intermediate mesoderm | 3.81e-09 | 14 |
external genitalia | 6.82e-09 | 17 |
indifferent external genitalia | 6.82e-09 | 17 |
indifferent gonad | 6.82e-09 | 17 |
gonad | 3.30e-08 | 18 |
gonad primordium | 3.30e-08 | 18 |
adrenal gland | 1.27e-07 | 7 |
adrenal/interrenal gland | 1.27e-07 | 7 |
male organism | 1.44e-07 | 16 |
male reproductive system | 1.44e-07 | 16 |
male reproductive organ | 4.67e-07 | 15 |