FFCP PHASE1:Mm9::chrX:163647400..163647406,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19241 | |EntrezGene=19241 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=P20065 | |UniProt=P20065 | ||
|association_with_transcript=-153bp_to_ENSMUST00000112172_5end | |association_with_transcript=-153bp_to_ENSMUST00000112172_5end | ||
|cluster_id=chrX:163647400..163647406,- | |||
|description=CAGE_peak_5_at_Tmsb4x_5end | |description=CAGE_peak_5_at_Tmsb4x_5end | ||
|id=chrX:163647400..163647406,- | |id=chrX:163647400..163647406,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.61e-12,25;CL:0000068,3.94e-12,3;CL:0002202,3.94e-12,3;CL:0000069,3.94e-12,3;CL:0002632,3.94e-12,3;CL:0002368,3.94e-12,3;CL:0000307,3.94e-12,3;CL:0000377,3.94e-12,3;CL:0000682,1.59e-11,3;CL:0002076,1.09e-10,15;CL:0000223,8.55e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!1.31e-07!17;UBERON:0005181!1.31e-07!17;UBERON:0002224!1.31e-07!17;UBERON:0000915!1.31e-07!17;UBERON:0008947!1.31e-07!17;UBERON:0003258!1.31e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.94e-12,3;UBERON:0001005,3.94e-12,3;UBERON:0007196,3.94e-12,3;UBERON:0001558,3.94e-12,3;UBERON:0000344,1.49e-10,15;UBERON:0001962,1.38e-08,2;UBERON:0001961,1.38e-08,2;UBERON:0001744,1.38e-08,2;UBERON:0005178,2.78e-07,17;UBERON:0005181,2.78e-07,17;UBERON:0002224,2.78e-07,17;UBERON:0000915,2.78e-07,17;UBERON:0008947,2.78e-07,17;UBERON:0003258,2.78e-07,17 | |||
|phase1_expression=0,1.39590163055744,2.27499619694768,0,0,1.00727563147134,0.467225281191051,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.17008658030214,0,0,3.67982572424835,2.98232065387321,1.72269589234506,2.15380998079537,3.01659725760245,0.570070258369122,0,1.99557459589774,0,0,0,0.577703239502549,0.498703936075477,1.02084678131185,0.418531630736908,1.5626706890476,0,0,0.683045484958446,0.971020706062307,0.125896817975577,0,0,0,0.872100625521786,0.439372365468944,0.388859798148567,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0.404632921719196,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0,0,0,0,0.285650984403804,0.220868540951614,0.244981598429908,0,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0,0,0,0.605809546665472,1.058001841495,0.579728977403356,0,0,0,0,0,0,0.340860645156116,0,0,0.14084341977668,0,0,0,4.32982082022428,6.33399663687746,2.52762222507392,0,0,0,0,0,0,0,0,0,0.247194967734374,0.578397427679647,0,0.161766849947409,0,0,0,0.292780797011547,0,0.255457055208591,0.718890747035522,0,0.762421362438388,0.149790639404823,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0,0.360124259610698,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0.393528463494808,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.380451252225118,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0,0.325929952884052,0.509235257325564,1.17345124144251,2.84760637651087,2.38043640886014,0.975668239288994,0,0.221464689648775,0.478364305972461,0.327726629431476,0.345369963731791,0.144649058581512,0,0.54390568381871,0,0,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.469343416127421,0.21183207086382,0.441056796109924,0,0.161464426695906,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0.376736914009382,0,0,0.339956859987711,0.69975726161829,0.552799895217695,1.90934123603023,0,0.203319467126849,0.756037385752609,0.418176592028937,1.52853794622324,1.34864346384821,1.07449492442937,1.57053565190418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0.386379188064381,1.12609485270709,1.46521299413812,0.857473516316263,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0.666740183404846,0,0,0.252697211763798,1.01391719956096,0,0.280924522409647,0.0640251524048693,0.229741875822453,0,0,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.492522411877817,0.409231043169689,0.154936841185966,0,0,0.467863216890817,0,0,0,0 | |phase1_expression=0,1.39590163055744,2.27499619694768,0,0,1.00727563147134,0.467225281191051,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.17008658030214,0,0,3.67982572424835,2.98232065387321,1.72269589234506,2.15380998079537,3.01659725760245,0.570070258369122,0,1.99557459589774,0,0,0,0.577703239502549,0.498703936075477,1.02084678131185,0.418531630736908,1.5626706890476,0,0,0.683045484958446,0.971020706062307,0.125896817975577,0,0,0,0.872100625521786,0.439372365468944,0.388859798148567,0.279972843250725,0,0,0,0,0.257259436035947,0,0,0.404632921719196,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0,0,0,0,0.285650984403804,0.220868540951614,0.244981598429908,0,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0,0,0,0.605809546665472,1.058001841495,0.579728977403356,0,0,0,0,0,0,0.340860645156116,0,0,0.14084341977668,0,0,0,4.32982082022428,6.33399663687746,2.52762222507392,0,0,0,0,0,0,0,0,0,0.247194967734374,0.578397427679647,0,0.161766849947409,0,0,0,0.292780797011547,0,0.255457055208591,0.718890747035522,0,0.762421362438388,0.149790639404823,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0,0.360124259610698,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0.393528463494808,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.380451252225118,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0,0.325929952884052,0.509235257325564,1.17345124144251,2.84760637651087,2.38043640886014,0.975668239288994,0,0.221464689648775,0.478364305972461,0.327726629431476,0.345369963731791,0.144649058581512,0,0.54390568381871,0,0,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.469343416127421,0.21183207086382,0.441056796109924,0,0.161464426695906,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0.376736914009382,0,0,0.339956859987711,0.69975726161829,0.552799895217695,1.90934123603023,0,0.203319467126849,0.756037385752609,0.418176592028937,1.52853794622324,1.34864346384821,1.07449492442937,1.57053565190418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0.386379188064381,1.12609485270709,1.46521299413812,0.857473516316263,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.486213434136588,0.209613162627982,0,0.666740183404846,0,0,0.252697211763798,1.01391719956096,0,0.280924522409647,0.0640251524048693,0.229741875822453,0,0,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.492522411877817,0.409231043169689,0.154936841185966,0,0,0.467863216890817,0,0,0,0 | ||
|short_description=p5@Tmsb4x | |short_description=p5@Tmsb4x | ||
}} | }} |
Latest revision as of 18:39, 1 October 2015
Short description: | p5@Tmsb4x |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tmsb4x_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | -153bp_to_ENSMUST00000112172_5end |
EntrezGene: | Tmsb4x |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.61e-12 | 25 |
duct epithelial cell | 3.94e-12 | 3 |
epithelial cell of tracheobronchial tree | 3.94e-12 | 3 |
branched duct epithelial cell | 3.94e-12 | 3 |
epithelial cell of lower respiratory tract | 3.94e-12 | 3 |
respiratory epithelial cell | 3.94e-12 | 3 |
tracheal epithelial cell | 3.94e-12 | 3 |
tracheoblast | 3.94e-12 | 3 |
M cell of gut | 1.59e-11 | 3 |
endo-epithelial cell | 1.09e-10 | 15 |
endodermal cell | 8.55e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 3.94e-12 | 3 |
respiratory airway | 3.94e-12 | 3 |
tracheobronchial tree | 3.94e-12 | 3 |
lower respiratory tract | 3.94e-12 | 3 |
mucosa | 1.49e-10 | 15 |
gut-associated lymphoid tissue | 1.38e-08 | 2 |
mucosa-associated lymphoid tissue | 1.38e-08 | 2 |
lymphoid tissue | 1.38e-08 | 2 |
thoracic cavity element | 2.78e-07 | 17 |
thoracic segment organ | 2.78e-07 | 17 |
thoracic cavity | 2.78e-07 | 17 |
thoracic segment of trunk | 2.78e-07 | 17 |
respiratory primordium | 2.78e-07 | 17 |
endoderm of foregut | 2.78e-07 | 17 |