FFCP PHASE1:Mm9::chr7:98120896..98120913,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=375 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:98120896..98120913,+ | |||
|description=CAGE_peak_at_chr7:98120896..98120913,+ | |description=CAGE_peak_at_chr7:98120896..98120913,+ | ||
|id=chr7:98120896..98120913,+ | |id=chr7:98120896..98120913,+ | ||
|ontology_enrichment_celltype=CL:0000063!3.03e-13!66;CL:0000548!6.17e-09!115;CL:0000004!6.17e-09!115;CL:0000255!6.17e-09!115;CL:0000144!8.70e-09!121;CL:0000012!8.70e-09!121;CL:0002371!1.28e-08!118;CL:0002320!2.71e-07!46;CL:0000134!2.71e-07!46;CL:0000066!4.35e-07!25 | |ontology_enrichment_celltype=CL:0000063!3.03e-13!66;CL:0000548!6.17e-09!115;CL:0000004!6.17e-09!115;CL:0000255!6.17e-09!115;CL:0000144!8.70e-09!121;CL:0000012!8.70e-09!121;CL:0002371!1.28e-08!118;CL:0002320!2.71e-07!46;CL:0000134!2.71e-07!46;CL:0000066!4.35e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.28e-12,54;CL:0002320,9.82e-12,46;CL:0000134,9.82e-12,46;CL:0000223,1.04e-09,20;CL:0000068,1.66e-09,3;CL:0002202,1.66e-09,3;CL:0000069,1.66e-09,3;CL:0002632,1.66e-09,3;CL:0002368,1.66e-09,3;CL:0000307,1.66e-09,3;CL:0000377,1.66e-09,3;CL:0002031,3.26e-09,25;CL:0000066,3.91e-09,25;CL:0000349,1.41e-08,3;CL:0000351,1.41e-08,3;CL:0002076,1.72e-08,15;CL:0000988,3.15e-08,32;CL:0002032,3.15e-08,32;CL:0000037,3.15e-08,32;CL:0000837,3.15e-08,32;CL:0000215,3.28e-08,3;CL:0000553,2.74e-07,6;CL:0000556,2.74e-07,6;CL:0000839,3.19e-07,13;CL:0002476,3.68e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.09e-07!15;UBERON:0002384!2.71e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.82e-12,46;UBERON:0003126,1.66e-09,3;UBERON:0001005,1.66e-09,3;UBERON:0007196,1.66e-09,3;UBERON:0001558,1.66e-09,3;UBERON:0000358,1.41e-08,3;UBERON:0000307,1.41e-08,3;UBERON:0007010,1.41e-08,3;UBERON:0001962,3.22e-07,2;UBERON:0001961,3.22e-07,2;UBERON:0001744,3.22e-07,2 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,1.81478526784098,2.50447864973174,0.33575854382378,3.50418960893289,0.387369970324729,0.703943610758334,0.468129052643987,2.05461561870606,0.797721589953364,0.171200729931206,1.04904482902797,0.666219523631325,1.21485160433896,3.49780939064073,0.946386496074713,1.09691546884591,1.69755860719212,0.0850432901510698,0,2.87319768052829,6.55968933452967,4.5881856213434,1.14846392823004,0.430761996159075,0.215471232685889,7.79096019771133,0.756090389279792,0.443461021310609,0.635030673459631,0,0,0.577703239502549,0.332469290716985,0.612508068787107,0.418531630736908,0,0,0.588231488031014,0,0.971020706062307,0.251793635951155,0,0,0,0,0,0.388859798148567,0,0,1.67782606057736,0,0,0.514518872071894,0.85960031981627,0,0,0,0,0.677689064138264,0,0.899899717281399,0.988866362566974,0,0.299600110518405,0,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0.837548997004143,0,0.15279824777681,0,0.569486723196412,0.559198337475902,1.4387976733305,1.20914496170857,1.15945795480671,9.46466264679525,0,1.07940638327563,0,0.448026887097336,0.140444420131752,0,1.55871602761721,2.47337702157238,0.281686839553361,1.28326477414318,0,0,4.11332977921307,3.29367825117628,2.52762222507392,0,0,0,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0.289198713839823,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0.239630249011841,1.19980546198682,0.127070227073065,0.149790639404823,0.457500602818626,0,0,0.255715457330331,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0.51469581422943,0,0,0.234526059981096,0.720248245844059,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0.233530684734339,0.329119699826961,0.32833492815819,0.405344047729279,0.292399974850665,0.219550115291051,0.268412837520744,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.494096864172033,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.246794327843601,0.592905254174298,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.358794827043824,0,0,0,0,0.169745085775188,0.469380496577004,0.167506257441816,0,0,0.472905432318573,0,0.318909537314974,0.327726629431476,0,0,6.03165135757089,4.35124547054968,0,0,0.160550589987792,0.234423373184406,0,0,0,0.390438744296638,0,0.477937595905104,0,0,0,0.292255857911312,0,0,0,0.534196811001766,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0.180938774784468,0,0.164140899745061,0.582961673259701,0,0,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0,0.419854356970974,0.276399947608848,0,0,0,0.540026704109006,0,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.388844919875379,0,0,0,0.330916980914195,0,0.129159823477731,0.168956125490778,0,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0.201932899896295,0.15241361331,0.302478555410522,0.0974578807397524,0.0962118416403295,0,0,1.33191572024439,1.25599399253266,2.18250001273302,0,0.187682475451182,0,0,0.501572104035363,0,0.460325236507177,0,3.26521046453006,0,0,0,0.45032120322422,0,0,0.207574695168353,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0,0.187283014939765,0,0,0,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.365855945745545,0,0,0,0,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0,0,0,0 | |phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,1.81478526784098,2.50447864973174,0.33575854382378,3.50418960893289,0.387369970324729,0.703943610758334,0.468129052643987,2.05461561870606,0.797721589953364,0.171200729931206,1.04904482902797,0.666219523631325,1.21485160433896,3.49780939064073,0.946386496074713,1.09691546884591,1.69755860719212,0.0850432901510698,0,2.87319768052829,6.55968933452967,4.5881856213434,1.14846392823004,0.430761996159075,0.215471232685889,7.79096019771133,0.756090389279792,0.443461021310609,0.635030673459631,0,0,0.577703239502549,0.332469290716985,0.612508068787107,0.418531630736908,0,0,0.588231488031014,0,0.971020706062307,0.251793635951155,0,0,0,0,0,0.388859798148567,0,0,1.67782606057736,0,0,0.514518872071894,0.85960031981627,0,0,0,0,0.677689064138264,0,0.899899717281399,0.988866362566974,0,0.299600110518405,0,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0.837548997004143,0,0.15279824777681,0,0.569486723196412,0.559198337475902,1.4387976733305,1.20914496170857,1.15945795480671,9.46466264679525,0,1.07940638327563,0,0.448026887097336,0.140444420131752,0,1.55871602761721,2.47337702157238,0.281686839553361,1.28326477414318,0,0,4.11332977921307,3.29367825117628,2.52762222507392,0,0,0,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0.289198713839823,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0.239630249011841,1.19980546198682,0.127070227073065,0.149790639404823,0.457500602818626,0,0,0.255715457330331,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0.51469581422943,0,0,0.234526059981096,0.720248245844059,0.23674473558521,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0.233530684734339,0.329119699826961,0.32833492815819,0.405344047729279,0.292399974850665,0.219550115291051,0.268412837520744,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.494096864172033,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.246794327843601,0.592905254174298,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.358794827043824,0,0,0,0,0.169745085775188,0.469380496577004,0.167506257441816,0,0,0.472905432318573,0,0.318909537314974,0.327726629431476,0,0,6.03165135757089,4.35124547054968,0,0,0.160550589987792,0.234423373184406,0,0,0,0.390438744296638,0,0.477937595905104,0,0,0,0.292255857911312,0,0,0,0.534196811001766,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0.180938774784468,0,0.164140899745061,0.582961673259701,0,0,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0,0.419854356970974,0.276399947608848,0,0,0,0.540026704109006,0,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.388844919875379,0,0,0,0.330916980914195,0,0.129159823477731,0.168956125490778,0,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0.201932899896295,0.15241361331,0.302478555410522,0.0974578807397524,0.0962118416403295,0,0,1.33191572024439,1.25599399253266,2.18250001273302,0,0.187682475451182,0,0,0.501572104035363,0,0.460325236507177,0,3.26521046453006,0,0,0,0.45032120322422,0,0,0.207574695168353,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0,0.187283014939765,0,0,0,0.115884325944855,0.38581844092741,0,0,0.342869252385415,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.365855945745545,0,0,0,0,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr7:98120896..98120913,+ | |short_description=p@chr7:98120896..98120913,+ | ||
}} | }} |
Latest revision as of 18:24, 5 August 2015
Short description: | p@chr7:98120896..98120913, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:98120896..98120913, + |
Coexpression cluster: | MCL_coexpression_mm9:375 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.28e-12 | 54 |
connective tissue cell | 9.82e-12 | 46 |
mesenchymal cell | 9.82e-12 | 46 |
endodermal cell | 1.04e-09 | 20 |
duct epithelial cell | 1.66e-09 | 3 |
epithelial cell of tracheobronchial tree | 1.66e-09 | 3 |
branched duct epithelial cell | 1.66e-09 | 3 |
epithelial cell of lower respiratory tract | 1.66e-09 | 3 |
respiratory epithelial cell | 1.66e-09 | 3 |
tracheal epithelial cell | 1.66e-09 | 3 |
tracheoblast | 1.66e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 3.26e-09 | 25 |
epithelial cell | 3.91e-09 | 25 |
extraembryonic cell | 1.41e-08 | 3 |
trophoblast cell | 1.41e-08 | 3 |
endo-epithelial cell | 1.72e-08 | 15 |
hematopoietic cell | 3.15e-08 | 32 |
hematopoietic oligopotent progenitor cell | 3.15e-08 | 32 |
hematopoietic stem cell | 3.15e-08 | 32 |
hematopoietic multipotent progenitor cell | 3.15e-08 | 32 |
barrier cell | 3.28e-08 | 3 |
megakaryocyte progenitor cell | 2.74e-07 | 6 |
megakaryocyte | 2.74e-07 | 6 |
myeloid lineage restricted progenitor cell | 3.19e-07 | 13 |
bone marrow macrophage | 3.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.82e-12 | 46 |
trachea | 1.66e-09 | 3 |
respiratory airway | 1.66e-09 | 3 |
tracheobronchial tree | 1.66e-09 | 3 |
lower respiratory tract | 1.66e-09 | 3 |
blastocyst | 1.41e-08 | 3 |
blastula | 1.41e-08 | 3 |
cleaving embryo | 1.41e-08 | 3 |
gut-associated lymphoid tissue | 3.22e-07 | 2 |
mucosa-associated lymphoid tissue | 3.22e-07 | 2 |
lymphoid tissue | 3.22e-07 | 2 |