CL:1000615: Difference between revisions
From FANTOM5_SSTAR
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|id=CL:1000615
|name=kidney cortex tubule cell
|namespace=cell
|def=
|xref=KUPO:0001024
|is_a=CL:0002584;;CL:1000494
|synonym=
|comment=
|alt_id=
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|id=CL:1000615 | |||
|is_a=CL:0002584 ;;CL:1000494 | |||
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|name=kidney cortex tubule cell | |||
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|part_of=UBERON:0006853 | |part_of=UBERON:0006853 | ||
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
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Latest revision as of 16:47, 12 September 2014
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002584(renal cortical epithelial cell),CL:1000494(nephron tubule epithelial cell) |
|---|---|
| part_of: | UBERON:0006853(renal cortex tubule) |
Children
| is a: | CL:0002306 (epithelial cell of proximal tubule) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11676-122H2 (Renal Proximal Tubular Epithelial Cell, donor3)
Mouse (Mus musculus)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11595-120H2 (Renal Proximal Tubular Epithelial Cell, donor2)
- 11676-122H2 (Renal Proximal Tubular Epithelial Cell, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000615 (kidney cortex tubule cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
