Swissregulon:NFIL3.p1: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{SwissregulonMotif
|datasource=http://www.swissregulon.unibas.ch/
|name=NFIL3.p1
|associated_transcription_factors=1.000:4783:NFIL3:nuclear factor, interleukin 3 regulated...") |
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{{SwissregulonMotif | {{SwissregulonMotif | ||
|associated_transcription_factors=1.000:4783:NFIL3:nuclear factor, interleukin 3 regulated::NM_005384:E4BP4,NFIL3A,NF-IL3A | |||
|datasource=http://www.swissregulon.unibas.ch/ | |datasource=http://www.swissregulon.unibas.ch/ | ||
|gostat_on_mara_hg19=GO:0008219!cell death!6.4924874739059e-05!929;735;29965;8633;6314;1191;58484;2898;3428;8835;959;2537$GO:0016265!death!6.4924874739059e-05!929;735;29965;8633;6314;1191;58484;2898;3428;8835;959;2537$GO:0006915!apoptosis!0.000159215365516873!929;735;29965;8633;1191;2898;58484;3428;8835;959;2537$GO:0012501!programmed cell death!0.000159215365516873!929;735;29965;8633;1191;2898;58484;3428;8835;959;2537$GO:0006954!inflammatory response!0.0001916670638315!1191;729230;929;735;64581;959;629$GO:0009611!response to wounding!0.0001916670638315!1191;729230;64805;929;735;64581;959;629$GO:0043067!regulation of programmed cell death!0.0001916670638315!735;29965;1191;2898;58484;3428;8835;959;2537$GO:0006952!defense response!0.0001916670638315!729230;6039;929;735;629;1191;58484;959;64581$GO:0009605!response to external stimulus!0.000328127333567786!729230;64805;929;735;629;1191;58484;959;64581$GO:0048468!cell development!0.00034463440002515!929;735;29965;8633;6314;1191;58484;2898;3428;8835;959;2537$GO:0042981!regulation of apoptosis!0.00106668447215602!735;29965;1191;58484;3428;959;8835;2537$GO:0008632!apoptotic program!0.00187467079211805!58484;735;29965;2537$GO:0005887!integral to plasma membrane!0.00291551113230433!729230;735;9376;3747;9414;10261;2898;959;22802;6575;2823$GO:0031226!intrinsic to plasma membrane!0.00301538887731356!729230;735;9376;3747;9414;10261;2898;959;22802;6575;2823$GO:0006956!complement activation!0.00303469000861738!1191;735;629$GO:0002541!activation of plasma proteins during acute inflammatory response!0.00303469000861738!1191;735;629$GO:0002252!immune effector process!0.00303469000861738!1191;735;959;629$GO:0045087!innate immune response!0.00329351898790611!1191;735;64581;629$GO:0042771!DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis!0.00418254390483607!3428;29965$GO:0044459!plasma membrane part!0.00418254390483607!1740;729230;9628;929;735;9376;3747;9414;10261;2898;959;22802;6575;2823$GO:0006950!response to stress!0.00451771060370554!729230;64805;929;735;29965;629;1191;3428;959;64581$GO:0016064!immunoglobulin mediated immune response!0.00478067881446844!1191;735;959$GO:0019724!B cell mediated immunity!0.00478067881446844!1191;735;959$GO:0042221!response to chemical stimulus!0.00478067881446844!1191;729230;2898;1066;9376;64581;629$GO:0043068!positive regulation of programmed cell death!0.00478067881446844!58484;2898;3428;735;29965$GO:0048869!cellular developmental process!0.00506099550833125!929;735;29965;8633;6314;1191;58484;2898;3428;8835;959;2537$GO:0030154!cell differentiation!0.00506099550833125!929;735;29965;8633;6314;1191;58484;2898;3428;8835;959;2537$GO:0032502!developmental process!0.00559755476719281!1462;3202;929;735;29965;8633;6314;1191;58484;2898;3428;8031;8835;959;3290;2537$GO:0004385!guanylate kinase activity!0.00559755476719281!9414;1740$GO:0043281!regulation of caspase activity!0.00592648162566946!58484;735;2537$GO:0008329!pattern recognition receptor activity!0.00607970436110138!929;64581$GO:0006957!complement activation, alternative pathway!0.00607970436110138!735;629$GO:0009607!response to biotic stimulus!0.00612458624151544!58484;3428;929;64581;629$GO:0002376!immune system process!0.00769076592003679!729230;929;735;629;10261;1191;3428;959;64581;2537$GO:0006916!anti-apoptosis!0.00785868426138944!1191;8835;959;2537$GO:0002253!activation of immune response!0.00812398971134341!1191;735;629$GO:0002449!lymphocyte mediated immunity!0.00823667516925526!1191;735;959$GO:0065007!biological regulation!0.00850581761088005!9628;64805;735;29965;84969;8863;629;58484;221037;9869;8835;6002;6617;2717;729230;3202;8633;8864;1191;2898;3428;8031;959;56980;2537$GO:0006959!humoral immune response!0.00850581761088005!1191;735;629$GO:0030330!DNA damage response, signal transduction by p53 class mediator!0.00850581761088005!3428;29965$GO:0002460!adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains!0.00850581761088005!1191;735;959$GO:0002250!adaptive immune response!0.00850581761088005!1191;735;959$GO:0006955!immune response!0.00858369197297208!729230;929;735;629;1191;10261;959;64581;2537$GO:0002443!leukocyte mediated immunity!0.00858369197297208!1191;735;959$GO:0051704!multi-organism process!0.00858369197297208!58484;3428;929;735;64581$GO:0002526!acute inflammatory response!0.0086998012008058!1191;735;629$GO:0050778!positive regulation of immune response!0.0104094878378087!1191;735;629$GO:0008630!DNA damage response, signal transduction resulting in induction of apoptosis!0.0104094878378087!3428;29965$GO:0002684!positive regulation of immune system process!0.0104676074699601!1191;735;629$GO:0044464!cell part!0.0107435093265079!9628;64805;1571;929;29965;201799;8863;218;629;9869;22802;2717;6575;59340;1066;51123;7431;3202;8864;27327;10261;2898;8566;8031;959;64581;56980;1460;57003;29978;8175;735;2628;84969;3747;9936;9348;286046;140901;58484;221037;8835;6002;6617;3290;729230;1740;55691;8633;9376;6314;9414;1191;3428;2537;2823$GO:0051707!response to other organism!0.0109956449172687!58484;3428;929;64581$GO:0050789!regulation of biological process!0.0109956449172687!9628;735;29965;84969;8863;629;58484;221037;9869;8835;6002;6617;2717;3202;8633;8864;1191;2898;3428;8031;959;56980;2537$GO:0044425!membrane part!0.0110853247579448!57003;9628;64805;1571;929;735;201799;3747;9348;9936;286046;3290;22802;6575;729230;1740;59340;55691;8633;9376;9414;10261;2898;64581;959;2537;2823$GO:0012502!induction of programmed cell death!0.0118792680209172!2898;3428;735;29965$GO:0050776!regulation of immune response!0.0136315320116954!1191;735;629$GO:0002682!regulation of immune system process!0.0139542938501388!1191;735;629$GO:0009636!response to toxin!0.0139542938501388!1066;9376$GO:0043066!negative regulation of apoptosis!0.0139542938501388!1191;8835;959;2537$GO:0048518!positive regulation of biological process!0.0139542938501388!735;29965;629;1191;2898;58484;3428;8031$GO:0043069!negative regulation of programmed cell death!0.0140325886776741!1191;8835;959;2537$GO:0007165!signal transduction!0.0140325886776741!9628;64805;929;735;29965;8863;58484;3707;8835;6002;729230;59340;8633;8864;10261;2898;8031;64581;1460;2537$GO:0030168!platelet activation!0.0140325886776741!64805;959$GO:0009968!negative regulation of signal transduction!0.0141307956557403!9628;8835;6002$GO:0051240!positive regulation of multicellular organismal process!0.0142993455005904!1191;735;629$GO:0019898!extrinsic to membrane!0.014866258168029!9628;55691;929$GO:0006958!complement activation, classical pathway!0.0165471791884605!1191;735$GO:0002455!humoral immune response mediated by circulating immunoglobulin!0.0185844889463169!1191;735$GO:0043065!positive regulation of apoptosis!0.0185844889463169!58484;3428;735;29965$GO:0005886!plasma membrane!0.0186622802846176!9628;64805;929;735;3747;22802;6575;729230;1740;59340;9376;10261;9414;2898;959;2823$GO:0000267!cell fraction!0.018795289219358!59340;729230;1571;9376;959;3290;6575$GO:0035270!endocrine system development!0.018795289219358!1191;3202$GO:0050794!regulation of cellular process!0.018795289219358!9628;735;29965;84969;8863;58484;221037;9869;8835;6002;6617;3202;8633;8864;1191;2898;3428;8031;959;56980;2537$GO:0048172!regulation of short-term neuronal synaptic plasticity!0.018795289219358!2898$GO:0045019!negative regulation of nitric oxide biosynthetic process!0.018795289219358!2717$GO:0005174!CD40 receptor binding!0.018795289219358!959$GO:0003812!alternative-complement-pathway C3/C5 convertase activity!0.018795289219358!629$GO:0015068!glycine amidinotransferase activity!0.018795289219358!2628$GO:0015067!amidinotransferase activity!0.018795289219358!2628$GO:0031727!CCR2 chemokine receptor binding!0.018795289219358!729230$GO:0048020!CCR chemokine receptor binding!0.018795289219358!729230$GO:0008792!arginine decarboxylase activity!0.018795289219358!113451$GO:0001621!platelet ADP receptor activity!0.018795289219358!64805$GO:0031557!induction of programmed cell death in response to chemical stimulus!0.018795289219358!2898$GO:0001871!pattern binding!0.018795289219358!1462;929;3273$GO:0051239!regulation of multicellular organismal process!0.0198057151530812!1191;2898;735;629$GO:0008277!regulation of G-protein coupled receptor protein signaling pathway!0.0207132550492244!9628;6002$GO:0008629!induction of apoptosis by intracellular signals!0.0207132550492244!3428;29965$GO:0048522!positive regulation of cellular process!0.02228708946984!1191;58484;2898;3428;735;29965;8031$GO:0008037!cell recognition!0.02228708946984!1462;64581$GO:0019201!nucleotide kinase activity!0.02228708946984!9414;1740$GO:0007259!JAK-STAT cascade!0.0232046066715699!729230;8835$GO:0006909!phagocytosis!0.0253359594263792!929;64581$GO:0042398!amino acid derivative biosynthetic process!0.0262838277392018!2628;113451$GO:0019221!cytokine and chemokine mediated signaling pathway!0.0269519199948713!729230;29965$GO:0042770!DNA damage response, signal transduction!0.0269519199948713!3428;29965$GO:0006919!caspase activation!0.0288621658469815!58484;735$GO:0007154!cell communication!0.0288621658469815!9628;64805;929;735;29965;8863;58484;3707;8835;6002;729230;59340;8633;8864;10261;2898;8031;64581;1460;2537$GO:0008269!JAK pathway signal transduction adaptor activity!0.0288621658469815!8835$GO:0051902!negative regulation of mitochondrial depolarization!0.0288621658469815!2537$GO:0006600!creatine metabolic process!0.0288621658469815!2628$GO:0032735!positive regulation of interleukin-12 production!0.0288621658469815!959$GO:0006601!creatine biosynthetic process!0.0288621658469815!2628$GO:0005042!netrin receptor activity!0.0288621658469815!8633$GO:0008106!alcohol dehydrogenase (NADP+) activity!0.0288621658469815!218$GO:0016235!aggresome!0.0288621658469815!1191$GO:0004557!alpha-galactosidase activity!0.0288621658469815!2717$GO:0005148!prolactin receptor binding!0.0288621658469815!8835$GO:0008478!pyridoxal kinase activity!0.0288621658469815!8566$GO:0005102!receptor binding!0.0290245319869868!729230;221037;8031;8835;64581;959;2717$GO:0044424!intracellular part!0.0297000444896529!9628;1571;29965;8863;218;629;9869;2717;1066;7431;3202;8864;27327;8566;8031;64581;56980;1460;29978;2628;8175;84969;9348;140901;58484;221037;6002;8835;3290;6617;729230;55691;6314;9414;1191;3428;2537$GO:0043280!positive regulation of caspase activity!0.0310199330850636!58484;735$GO:0007242!intracellular signaling cascade!0.031931062421004!729230;9628;64805;735;29965;58484;8031;8835;64581;2537$GO:0005057!receptor signaling protein activity!0.0331290709271248!9628;8835;6002$GO:0035257!nuclear hormone receptor binding!0.0331290709271248!221037;8031$GO:0051427!hormone receptor binding!0.0331290709271248!221037;8031$GO:0032501!multicellular organismal process!0.0331290709271248!1462;5950;64805;3202;735;8633;629;6314;1191;58484;2898;3428;8031;959;3290$GO:0052185!modification of structure of other organism during symbiotic interaction!0.0331290709271248!735$GO:0033209!tumor necrosis factor-mediated signaling pathway!0.0331290709271248!29965$GO:0051883!killing of cells in other organism during symbiotic interaction!0.0331290709271248!735$GO:0006599!phosphagen metabolic process!0.0331290709271248!2628$GO:0052331!hemolysis by organism of red blood cells in other organism during symbiotic interaction!0.0331290709271248!735$GO:0046477!glycosylceramide catabolic process!0.0331290709271248!2717$GO:0019836!hemolysis by symbiont of host red blood cells!0.0331290709271248!735$GO:0051801!cytolysis of cells in other organism during symbiotic interaction!0.0331290709271248!735$GO:0001907!killing by symbiont of host cells!0.0331290709271248!735$GO:0031640!killing of cells of another organism!0.0331290709271248!735$GO:0001897!cytolysis by symbiont of host cells!0.0331290709271248!735$GO:0051818!disruption of cells of other organism during symbiotic interaction!0.0331290709271248!735$GO:0008268!receptor signaling protein tyrosine kinase signaling protein activity!0.0331290709271248!8835$GO:0044004!disruption by symbiont of host cells!0.0331290709271248!735$GO:0051817!modification of morphology or physiology of other organism during symbiotic interaction!0.0331290709271248!735$GO:0051715!cytolysis of cells of another organism!0.0331290709271248!735$GO:0032655!regulation of interleukin-12 production!0.0331290709271248!959$GO:0052332!modification by organism of cell membrane in other organism during symbiotic interaction!0.0331290709271248!735$GO:0042396!phosphagen biosynthetic process!0.0331290709271248!2628$GO:0009756!carbohydrate mediated signaling!0.0331290709271248!64581$GO:0052111!modification by symbiont of host structure!0.0331290709271248!735$GO:0052025!modification by symbiont of host cell membrane!0.0331290709271248!735$GO:0052043!modification by symbiont of host cellular component!0.0331290709271248!735$GO:0044003!modification by symbiont of host morphology or physiology!0.0331290709271248!735$GO:0052188!modification of cellular component in other organism during symbiotic interaction!0.0331290709271248!735$GO:0050790!regulation of catalytic activity!0.0364706647267991!729230;58484;735;2537;2717$GO:0007166!cell surface receptor linked signal transduction!0.0385992921337488!59340;729230;9628;64805;929;29965;10261;2898;8031;6002;1460$GO:0005737!cytoplasm!0.0401439376360355!29978;9628;1571;2628;8863;9348;218;140901;629;58484;8835;3290;2717;729230;1066;55691;7431;8864;27327;6314;1191;8566;64581;2537$GO:0051354!negative regulation of oxidoreductase activity!0.0401439376360355!2717$GO:0004682!protein kinase CK2 activity!0.0401439376360355!1460$GO:0046514!ceramide catabolic process!0.0401439376360355!2717$GO:0042832!defense response to protozoan!0.0401439376360355!64581$GO:0005315!inorganic phosphate transmembrane transporter activity!0.0401439376360355!6575$GO:0006910!phagocytosis, recognition!0.0401439376360355!64581$GO:0051900!regulation of mitochondrial depolarization!0.0401439376360355!2537$GO:0030224!monocyte differentiation!0.0401439376360355!3428$GO:0005131!growth hormone receptor binding!0.0401439376360355!8835$GO:0051001!negative regulation of nitric-oxide synthase activity!0.0401439376360355!2717$GO:0015016![heparan sulfate]-glucosamine N-sulfotransferase activity!0.0401439376360355!9348$GO:0008509!anion transmembrane transporter activity!0.0402774887297183!9376;22802;6575$GO:0001775!cell activation!0.0402774887297183!64805;64581;959$GO:0048519!negative regulation of biological process!0.0402774887297183!1191;9628;8835;6002;959;2537;2717$GO:0006917!induction of apoptosis!0.041380366731188!3428;735;29965$GO:0016776!phosphotransferase activity, phosphate group as acceptor!0.041380366731188!9414;1740$GO:0016021!integral to membrane!0.0429748836338526!57003;64805;735;201799;3747;9348;9936;286046;3290;22802;6575;729230;59340;8633;9376;9414;10261;2898;64581;959;2537;2823$GO:0031224!intrinsic to membrane!0.0458089544085215!57003;64805;735;201799;3747;9348;9936;286046;3290;22802;6575;729230;59340;8633;9376;9414;10261;2898;64581;959;2537;2823$GO:0051345!positive regulation of hydrolase activity!0.0459790148697584!58484;735$GO:0051882!mitochondrial depolarization!0.0459790148697584!2537$GO:0046521!sphingoid catabolic process!0.0459790148697584!2717$GO:0000389!nuclear mRNA 3'-splice site recognition!0.0459790148697584!8175$GO:0016019!peptidoglycan receptor activity!0.0459790148697584!929$GO:0046479!glycosphingolipid catabolic process!0.0459790148697584!2717$GO:0001562!response to protozoan!0.0459790148697584!64581$GO:0065009!regulation of a molecular function!0.0464556350399582!729230;58484;735;2537;2717$GO:0065008!regulation of biological quality!0.0490916549606486!729230;64805;2898;8835;959;2537$GO:0005624!membrane fraction!0.0493042268011719!59340;1571;9376;3290;6575 | |||
|gostat_on_mara_mm9=GO:0004091!carboxylesterase activity!0.0372804616519139!14756;67758$GO:0005615!extracellular space!0.0452285605282985!19275;67163;69583;12475;229759;76113;11657;67758;17381;67374;12654;16195;14756;12870;26464$GO:0007623!circadian rhythm!0.0452285605282985!19215;18627;18628 | |||
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| |||
|name=NFIL3.p1 | |name=NFIL3.p1 | ||
|weight_matrix=NA:NFIL3.p1;PO:A:C:G:T;01:8.118582:1.230281:2.511653:212.020174;02:4.577198:2.862591:43.45539:172.985511;03:183.520777:4.484349:9.767265:26.108299;04:5.186603:38.450992:5.675924:174.567171;05:43.668387:3.716931:158.411993:18.083379;06:10.349672:15.000746:1.595143:196.935129;07:208.920568:9.132661:5.01302:0.814441;08:203.151407:3.908454:14.491892:2.328937;09:15.930698:87.968618:34.149265:85.832109;10:66.896576:56.188096:42.21673:58.579288;11:56.740191:49.656189:34.922211:82.562099 | |weight_matrix=NA:NFIL3.p1;PO:A:C:G:T;01:8.118582:1.230281:2.511653:212.020174;02:4.577198:2.862591:43.45539:172.985511;03:183.520777:4.484349:9.767265:26.108299;04:5.186603:38.450992:5.675924:174.567171;05:43.668387:3.716931:158.411993:18.083379;06:10.349672:15.000746:1.595143:196.935129;07:208.920568:9.132661:5.01302:0.814441;08:203.151407:3.908454:14.491892:2.328937;09:15.930698:87.968618:34.149265:85.832109;10:66.896576:56.188096:42.21673:58.579288;11:56.740191:49.656189:34.922211:82.562099 | ||
}} | }} |
Latest revision as of 09:55, 17 April 2012
Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Motif Activities (MARA) on Phase1 data
hg19
Chart |
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Sample of clicked point: |
mm9
Z-value table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chart |
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Sample of clicked point: |
GOStat results on predicted Motif target
hg19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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mm9 | ||||||||
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