FFCP PHASE1:Hg19::chr13:38153485..38153498,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:38153485..38153498,- | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_at_chr13:38153485..38153498,- | |description=CAGE_peak_at_chr13:38153485..38153498,- | ||
|id=chr13:38153485..38153498,- | |id=chr13:38153485..38153498,- | ||
|ontology_enrichment_celltype=CL:0000055!1.84e-20!180;CL:0000057!4.04e-15!75;CL:0002334!6.58e-12!12;CL:0000680!2.29e-09!57;CL:0000056!2.29e-09!57;CL:0000355!2.29e-09!57;CL:0000187!1.04e-07!54;CL:0000048!1.82e-07!430;CL:0000723!2.51e-07!436;CL:0002570!5.26e-07!8 | |ontology_enrichment_celltype=CL:0000055!1.84e-20!180;CL:0000057!4.04e-15!75;CL:0002334!6.58e-12!12;CL:0000680!2.29e-09!57;CL:0000056!2.29e-09!57;CL:0000355!2.29e-09!57;CL:0000187!1.04e-07!54;CL:0000048!1.82e-07!430;CL:0000723!2.51e-07!436;CL:0002570!5.26e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002334;7.76e-20;12!CL:1000306;3.52e-10;4!CL:0002547;3.52e-10;4!CL:0002580;7.73e-09;3!CL:0000135;1.07e-08;3!CL:0000388;1.07e-08;3!CL:0002579;1.14e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,9.94e-20,12;CL:0000057,2.97e-14,76;CL:1000306,2.57e-10,4;CL:0002547,2.57e-10,4;CL:0002580,6.64e-09,3;CL:0000135,7.56e-09,3;CL:0000388,7.56e-09,3;CL:0002579,1.73e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.77e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!4.60e-10!61;UBERON:0002036!4.60e-10!61;UBERON:0003082!4.60e-10!61;UBERON:0002385!1.84e-09!63;UBERON:0001015!1.84e-09!63;UBERON:0000383!1.84e-09!63;UBERON:0000914!2.00e-09!83;UBERON:0002329!2.00e-09!83;UBERON:0003077!2.00e-09!83;UBERON:0003059!2.00e-09!83;UBERON:0007282!2.00e-09!83;UBERON:0009618!2.00e-09!83;UBERON:0007285!2.00e-09!83;UBERON:0004872!4.88e-09!84;UBERON:0004290!1.17e-07!70;UBERON:0000490!1.96e-07!138;UBERON:0000948!5.95e-07!24;UBERON:0005498!5.95e-07!24;UBERON:0004140!5.95e-07!24;UBERON:0009881!5.95e-07!24;UBERON:0004141!5.95e-07!24;UBERON:0003084!5.95e-07!24;UBERON:0007005!5.95e-07!24;UBERON:0004139!5.95e-07!24;UBERON:0004291!5.95e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;3.52e-10;4!UBERON:0000415;3.52e-10;4!UBERON:0007240;3.52e-10;4!UBERON:0005742;3.52e-10;4!UBERON:0005734;3.52e-10;4!UBERON:0004664;3.52e-10;4!UBERON:0004663;3.52e-10;4!UBERON:0007846;1.07e-08;3!UBERON:0000043;1.07e-08;3!UBERON:0007845;1.07e-08;3!UBERON:0001443;1.18e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.57e-10,4;UBERON:0007240,2.57e-10,4;UBERON:0005742,2.57e-10,4;UBERON:0005734,2.57e-10,4;UBERON:0004664,2.57e-10,4;UBERON:0004663,2.57e-10,4;UBERON:0007846,7.56e-09,3;UBERON:0000043,7.56e-09,3;UBERON:0007845,7.56e-09,3;UBERON:0001443,1.29e-07,11 | |||
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|short_description=p@chr13:38153485..38153498,- | |short_description=p@chr13:38153485..38153498,- | ||
}} | }} |
Latest revision as of 15:53, 24 July 2015
Short description: | p@chr13:38153485..38153498, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38153485..38153498, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 9.94e-20 | 12 |
fibroblast | 2.97e-14 | 76 |
fibroblast of tunica adventitia of artery | 2.57e-10 | 4 |
fibroblast of the aortic adventitia | 2.57e-10 | 4 |
preadipocyte of the breast | 6.64e-09 | 3 |
fibrocyte | 7.56e-09 | 3 |
tendon cell | 7.56e-09 | 3 |
omentum preadipocyte | 1.73e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
artery wall | 2.57e-10 | 4 |
tunica adventitia of artery | 2.57e-10 | 4 |
adventitia | 2.57e-10 | 4 |
tunica adventitia of blood vessel | 2.57e-10 | 4 |
aorta tunica adventitia | 2.57e-10 | 4 |
aorta wall | 2.57e-10 | 4 |
dense regular connective tissue | 7.56e-09 | 3 |
tendon | 7.56e-09 | 3 |
regular connective tissue | 7.56e-09 | 3 |
chest | 1.29e-07 | 11 |