FFCP PHASE1:Hg19::chr10:123748653..123748685,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10579 | |EntrezGene=10579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11523 | |HGNC=11523 | ||
|TSSclassifier=strong | |||
|UniProt=O95359 | |UniProt=O95359 | ||
|association_with_transcript=-3bp_to_ENST00000492689,NM_206861,NM_206862,uc001lfv.2,uc001lfw.2,uc009xzx.2,uc010qtv.1_5end | |association_with_transcript=-3bp_to_ENST00000492689,NM_206861,NM_206862,uc001lfv.2,uc001lfw.2,uc009xzx.2,uc010qtv.1_5end | ||
|cluster_id=chr10:123748653..123748685,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_8_at_TACC2_5end | |description=CAGE_peak_8_at_TACC2_5end | ||
|id=chr10:123748653..123748685,+ | |id=chr10:123748653..123748685,+ | ||
|ontology_enrichment_celltype=CL:0002541!2.43e-15!3;CL:0000181!8.55e-14!12;CL:0000417!8.55e-14!12;CL:0000668!8.55e-14!12;CL:0000414!8.55e-14!12;CL:0000412!8.55e-14!12;CL:0000182!8.55e-14!12;CL:0000039!2.19e-11!7;CL:0000586!2.19e-11!7;CL:0000223!3.64e-09!59 | |ontology_enrichment_celltype=CL:0002541!2.43e-15!3;CL:0000181!8.55e-14!12;CL:0000417!8.55e-14!12;CL:0000668!8.55e-14!12;CL:0000414!8.55e-14!12;CL:0000412!8.55e-14!12;CL:0000182!8.55e-14!12;CL:0000039!2.19e-11!7;CL:0000586!2.19e-11!7;CL:0000223!3.64e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.11e-28;3!CL:0000039;3.97e-13;7!CL:0000586;3.97e-13;7!CL:0000182;9.67e-13;12!CL:0000083;1.54e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.20e-29,3;CL:0000039,3.89e-13,7;CL:0000586,3.89e-13,7;CL:0000182,1.04e-12,12;CL:0000083,1.62e-10,4;CL:0000223,2.86e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.06e-14;11!UBERON:0009497;8.88e-12;13!UBERON:0003124;2.53e-11;1!UBERON:0001041;7.05e-11;30 | |||
|ontology_enrichment_disease=DOID:305!3.47e-10!106;DOID:0050687!9.78e-10!143;DOID:170!7.86e-08!6 | |ontology_enrichment_disease=DOID:305!3.47e-10!106;DOID:0050687!9.78e-10!143;DOID:170!7.86e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:1799;3.95e-11;1!DOID:10165;3.95e-11;1!DOID:1798;3.95e-11;1!DOID:178;1.46e-10;1!DOID:326;1.46e-10;1!DOID:3978;1.46e-10;1!DOID:3394;1.46e-10;1!DOID:5844;1.46e-10;1!DOID:1793;1.54e-10;4!DOID:170;2.61e-07;6!DOID:7;4.70e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.15e-11,1;DOID:10165,4.15e-11,1;DOID:1798,4.15e-11,1;DOID:178,1.21e-10,1;DOID:326,1.21e-10,1;DOID:3978,1.21e-10,1;DOID:3394,1.21e-10,1;DOID:5844,1.21e-10,1;DOID:1793,1.62e-10,4;DOID:7,3.13e-08,39;DOID:170,2.69e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.43e-15!3;UBERON:0000920!2.43e-15!3;UBERON:0004921!2.68e-12!129;UBERON:0004185!2.68e-12!129;UBERON:0003124!1.50e-11!7;UBERON:0000077!4.76e-11!130;UBERON:0001007!1.94e-09!155;UBERON:0001555!1.94e-09!155;UBERON:0007026!1.94e-09!155;UBERON:0004119!2.57e-09!169;UBERON:0000925!2.57e-09!169;UBERON:0006595!2.57e-09!169;UBERON:0001041!9.99e-09!98;UBERON:0005631!1.47e-08!14;UBERON:0000158!1.47e-08!14;UBERON:0002107!1.75e-08!19;UBERON:0006925!1.75e-08!19;UBERON:0008836!1.75e-08!19;UBERON:0007499!2.15e-08!25;UBERON:0001737!3.18e-08!9;UBERON:0009856!4.92e-08!26;UBERON:0008835!3.05e-07!22;UBERON:0003894!3.05e-07!22;UBERON:0000949!4.59e-07!45;UBERON:0005911!5.21e-07!82;UBERON:0009854!6.70e-07!23;UBERON:0003929!6.98e-07!54 | |ontology_enrichment_uberon=UBERON:0000476!2.43e-15!3;UBERON:0000920!2.43e-15!3;UBERON:0004921!2.68e-12!129;UBERON:0004185!2.68e-12!129;UBERON:0003124!1.50e-11!7;UBERON:0000077!4.76e-11!130;UBERON:0001007!1.94e-09!155;UBERON:0001555!1.94e-09!155;UBERON:0007026!1.94e-09!155;UBERON:0004119!2.57e-09!169;UBERON:0000925!2.57e-09!169;UBERON:0006595!2.57e-09!169;UBERON:0001041!9.99e-09!98;UBERON:0005631!1.47e-08!14;UBERON:0000158!1.47e-08!14;UBERON:0002107!1.75e-08!19;UBERON:0006925!1.75e-08!19;UBERON:0008836!1.75e-08!19;UBERON:0007499!2.15e-08!25;UBERON:0001737!3.18e-08!9;UBERON:0009856!4.92e-08!26;UBERON:0008835!3.05e-07!22;UBERON:0003894!3.05e-07!22;UBERON:0000949!4.59e-07!45;UBERON:0005911!5.21e-07!82;UBERON:0009854!6.70e-07!23;UBERON:0003929!6.98e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.11e-28;3!UBERON:0000920;1.11e-28;3!UBERON:0002171;9.50e-11;1!UBERON:0006518;9.50e-11;1!UBERON:0008949;9.50e-11;1!UBERON:0000101;9.50e-11;1!UBERON:0002167;9.50e-11;1!UBERON:0005631;5.03e-09;10!UBERON:0000158;5.03e-09;10!UBERON:0002107;4.06e-08;19!UBERON:0006925;4.06e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.20e-29,3;UBERON:0003124,4.96e-22,7;UBERON:0005631,3.85e-11,14;UBERON:0000158,3.85e-11,14;UBERON:0002171,1.10e-10,1;UBERON:0006518,1.10e-10,1;UBERON:0008949,1.10e-10,1;UBERON:0000101,1.10e-10,1;UBERON:0002167,1.10e-10,1;UBERON:0002107,4.26e-08,19;UBERON:0006925,4.26e-08,19;UBERON:0008836,4.26e-08,19;UBERON:0000949,4.10e-07,45;UBERON:0008835,5.17e-07,22;UBERON:0003894,5.17e-07,22 | |||
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|short_description=p8@TACC2 | |short_description=p8@TACC2 | ||
}} | }} |
Latest revision as of 19:36, 16 September 2015
Short description: | p8@TACC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TACC2_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -3bp_to_ENST00000492689, NM_206861, NM_206862, uc001lfv.2, uc001lfw.2, uc009xzx.2, uc010qtv.1_5end |
EntrezGene: | TACC2 |
HGNC: | 11523 |
UniProt: | O95359 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.20e-29 | 3 |
germ line cell | 3.89e-13 | 7 |
germ cell | 3.89e-13 | 7 |
hepatocyte | 1.04e-12 | 12 |
epithelial cell of pancreas | 1.62e-10 | 4 |
endodermal cell | 2.86e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 9.20e-29 | 3 |
chorion | 4.96e-22 | 7 |
extraembryonic membrane | 3.85e-11 | 14 |
membranous layer | 3.85e-11 | 14 |
lower lobe of right lung | 1.10e-10 | 1 |
right lung lobe | 1.10e-10 | 1 |
lower lobe of lung | 1.10e-10 | 1 |
lobe of lung | 1.10e-10 | 1 |
right lung | 1.10e-10 | 1 |
liver | 4.26e-08 | 19 |
digestive gland | 4.26e-08 | 19 |
liver bud | 4.26e-08 | 19 |
endocrine system | 4.10e-07 | 45 |
hepatic diverticulum | 5.17e-07 | 22 |
liver primordium | 5.17e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.15e-11 | 1 |
endocrine pancreas cancer | 4.15e-11 | 1 |
pancreatic endocrine carcinoma | 4.15e-11 | 1 |
vascular disease | 1.21e-10 | 1 |
ischemia | 1.21e-10 | 1 |
extrinsic cardiomyopathy | 1.21e-10 | 1 |
myocardial ischemia | 1.21e-10 | 1 |
myocardial infarction | 1.21e-10 | 1 |
pancreatic cancer | 1.62e-10 | 4 |
disease of anatomical entity | 3.13e-08 | 39 |
endocrine gland cancer | 2.69e-07 | 6 |