FFCP PHASE1:Hg19::chr13:96706062..96706067,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55757 | |EntrezGene=55757 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15664 | |HGNC=15664 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N5K0,Q05D90,Q9NYU1 | |UniProt=Q8N5K0,Q05D90,Q9NYU1 | ||
|association_with_transcript=-326bp_to_ENST00000376714,NM_020121,uc001vmt.2,uc001vmv.2,uc010afo.2,uc010afp.2_5end | |association_with_transcript=-326bp_to_ENST00000376714,NM_020121,uc001vmt.2,uc001vmv.2,uc010afo.2,uc010afp.2_5end | ||
|cluster_id=chr13:96706062..96706067,- | |||
|description=CAGE_peak_3_at_UGGT2_5end | |description=CAGE_peak_3_at_UGGT2_5end | ||
|id=chr13:96706062..96706067,- | |id=chr13:96706062..96706067,- | ||
|ontology_enrichment_celltype=CL:0000066!1.23e-16!254;CL:0002076!1.12e-15!43;CL:0002251!4.89e-12!21;CL:0000223!1.03e-11!59;CL:0000039!1.91e-08!7;CL:0000586!1.91e-08!7;CL:0002322!1.37e-07!5 | |ontology_enrichment_celltype=CL:0000066!1.23e-16!254;CL:0002076!1.12e-15!43;CL:0002251!4.89e-12!21;CL:0000223!1.03e-11!59;CL:0000039!1.91e-08!7;CL:0000586!1.91e-08!7;CL:0002322!1.37e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.29e-13;7!CL:0000586;1.29e-13;7!CL:1001319;1.19e-07;1!CL:1000600;1.19e-07;1!CL:0000313;4.20e-07;1!CL:0000083;5.68e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.69e-13,7;CL:0000586,1.69e-13,7;CL:1001319,1.20e-07,1;CL:1000600,1.20e-07,1;CL:0000313,5.50e-07,1;CL:0000083,7.20e-07,4;CL:0000066,8.15e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.18e-35!106;DOID:0050687!2.22e-28!143;DOID:1749!5.16e-17!14;DOID:162!9.48e-17!235;DOID:14566!5.81e-16!239;DOID:299!5.34e-14!25;DOID:0050615!1.68e-07!16;DOID:0050686!1.70e-07!137;DOID:3119!2.13e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.74e-15;14!DOID:299;3.28e-14;25!DOID:305;9.66e-09;106!DOID:0050687;1.63e-07;143!DOID:120;1.82e-07;27!DOID:1799;4.20e-07;1!DOID:10165;4.20e-07;1!DOID:2152;4.20e-07;1!DOID:1798;4.20e-07;1!DOID:1793;5.68e-07;4!DOID:193;6.53e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.40e-22,106;DOID:0050687,5.77e-19,143;DOID:1749,8.32e-15,14;DOID:299,3.80e-14,25;DOID:162,9.27e-12,235;DOID:14566,2.09e-11,239;DOID:120,2.06e-07,27;DOID:2152,5.50e-07,1;DOID:1799,6.57e-07,1;DOID:10165,6.57e-07,1;DOID:1798,6.57e-07,1;DOID:1793,7.20e-07,4;DOID:193,7.31e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.14e-13!12;UBERON:0004119!6.69e-11!169;UBERON:0000925!6.69e-11!169;UBERON:0006595!6.69e-11!169;UBERON:0001007!3.69e-09!155;UBERON:0001555!3.69e-09!155;UBERON:0007026!3.69e-09!155;UBERON:0001004!9.78e-09!72;UBERON:0005911!2.51e-08!82;UBERON:0000077!4.68e-08!130;UBERON:0003729!5.11e-08!5;UBERON:0005156!1.50e-07!59;UBERON:0000990!1.50e-07!59;UBERON:0003343!2.68e-07!4;UBERON:0004785!2.68e-07!4;UBERON:0005153!7.13e-07!37;UBERON:0000161!7.55e-07!35;UBERON:0004807!7.64e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;4.84e-14;4!UBERON:0004785;4.84e-14;4!UBERON:0000007;6.69e-13;2!UBERON:0000974;1.58e-09;6!UBERON:0004645;1.19e-07;1!UBERON:0001256;1.19e-07;1!UBERON:0001259;1.19e-07;1!UBERON:0004913;1.79e-07;1!UBERON:0003703;1.79e-07;1!UBERON:0001174;1.79e-07;1!UBERON:0004914;1.79e-07;1!UBERON:0000344;2.21e-07;20!UBERON:0004911;4.20e-07;1!UBERON:0001052;7.19e-07;4!UBERON:0003296;7.19e-07;4!UBERON:0010133;7.19e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,4.86e-14,4;UBERON:0004785,4.86e-14,4;UBERON:0000007,5.60e-13,2;UBERON:0004645,1.20e-07,1;UBERON:0001256,1.20e-07,1;UBERON:0001259,1.20e-07,1;UBERON:0004913,2.23e-07,1;UBERON:0003703,2.23e-07,1;UBERON:0001174,2.23e-07,1;UBERON:0004914,2.23e-07,1;UBERON:0000344,2.26e-07,20;UBERON:0004911,5.50e-07,1;UBERON:0001052,6.22e-07,4;UBERON:0003296,6.59e-07,4;UBERON:0010133,6.59e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.860413786167011,0.609868530647977,0.530119073285941,0.348581828608555,0.518305275076852,0.504641701751257,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576570202095319,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0.307160702099232,0,0,0,0,2.95575571379191,0,0,3.52705846995986,0,0.123084805461069,0,0.449341755736634,0.716084698702437,0,0,0,0,0,0,0,0,0.349839999984783,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0,0.83654246567162,0,0,1.1528195219403,1.16684937732704,0.760531603454056,3.19001159731919,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,5.71314828557017,2.26164914294305,0.216388639742091,0,0,0,0,0,0,0,0,0.468528891450678,0.182454789215666,5.6742739490306,0,0,1.20990716048664,0,0,1.05226393590145,0,0,0,0,0,0,0,1.04135843001079,0.587954384486266,0.783532859223623,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,1.95551382734803,0.480952921509202,0,0.19980960958213,0.72045208577053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,1.76828463311521,0.687697182986169,0.83088067605837,0,2.32140586367385,0,0.335434687599266,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.513260513652988,2.81926008926669,0,0.157204305099666,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0.314531883711793,0,0,0,0,0,0,0,0.80057074828547,0,0,0.192687675289379,0,0,0,0,0,0,0,0.392590874004102,6.01645589073476,1.10057159113007,1.5018336599544,0,0,0,0,0,0.781514011233092,1.04762677792569,0,2.06998520703863,0,0,0,0,0,0,0,0,0.127762427639595,0,0,2.42786241694653,1.36597314810779,0.354809480650555,0.115233987555779,0,0,0,0.472775363535873,0.333694205676207,0.078493092850514,0,1.68163297988273,0,0.215927591218621,0,0,0,0.23248285073625,0,0,0,0,0,0.430227358820278,0,0,0,2.2910686854405,0.31020638566432,0,1.11855431797792,0.196300467230486,0.121917924982269,0,0,0,0,1.40363678077263,0.994753875806841,0,0.5647304101948,0,0.603851374266694,0,0,0.470317296361523,0.245148321753905,0.707029641304878,0,0,0,0,0,0,0.0999411559249289,1.2498775702396,1.41157948686277,0.641930933513346,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.109265571963696,0.253397002022874,0.509944148709909,2.13773924212448,0,1.25353769646188,0.227336094654718,0.535928260312357,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0.12729431655633,0,0,0,0.134704106029175,0.0717222053926763,0,4.63998631082555,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.860413786167011,0.609868530647977,0.530119073285941,0.348581828608555,0.518305275076852,0.504641701751257,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576570202095319,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0.307160702099232,0,0,0,0,2.95575571379191,0,0,3.52705846995986,0,0.123084805461069,0,0.449341755736634,0.716084698702437,0,0,0,0,0,0,0,0,0.349839999984783,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0,0.83654246567162,0,0,1.1528195219403,1.16684937732704,0.760531603454056,3.19001159731919,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,5.71314828557017,2.26164914294305,0.216388639742091,0,0,0,0,0,0,0,0,0.468528891450678,0.182454789215666,5.6742739490306,0,0,1.20990716048664,0,0,1.05226393590145,0,0,0,0,0,0,0,1.04135843001079,0.587954384486266,0.783532859223623,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,1.95551382734803,0.480952921509202,0,0.19980960958213,0.72045208577053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,1.76828463311521,0.687697182986169,0.83088067605837,0,2.32140586367385,0,0.335434687599266,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.513260513652988,2.81926008926669,0,0.157204305099666,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0.314531883711793,0,0,0,0,0,0,0,0.80057074828547,0,0,0.192687675289379,0,0,0,0,0,0,0,0.392590874004102,6.01645589073476,1.10057159113007,1.5018336599544,0,0,0,0,0,0.781514011233092,1.04762677792569,0,2.06998520703863,0,0,0,0,0,0,0,0,0.127762427639595,0,0,2.42786241694653,1.36597314810779,0.354809480650555,0.115233987555779,0,0,0,0.472775363535873,0.333694205676207,0.078493092850514,0,1.68163297988273,0,0.215927591218621,0,0,0,0.23248285073625,0,0,0,0,0,0.430227358820278,0,0,0,2.2910686854405,0.31020638566432,0,1.11855431797792,0.196300467230486,0.121917924982269,0,0,0,0,1.40363678077263,0.994753875806841,0,0.5647304101948,0,0.603851374266694,0,0,0.470317296361523,0.245148321753905,0.707029641304878,0,0,0,0,0,0,0.0999411559249289,1.2498775702396,1.41157948686277,0.641930933513346,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.109265571963696,0.253397002022874,0.509944148709909,2.13773924212448,0,1.25353769646188,0.227336094654718,0.535928260312357,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0.12729431655633,0,0,0,0.134704106029175,0.0717222053926763,0,4.63998631082555,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@UGGT2 | |short_description=p3@UGGT2 | ||
}} | }} |
Latest revision as of 06:27, 18 September 2015
Short description: | p3@UGGT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UGGT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -326bp_to_ENST00000376714, NM_020121, uc001vmt.2, uc001vmv.2, uc010afo.2, uc010afp.2_5end |
EntrezGene: | UGGT2 |
HGNC: | 15664 |
UniProt: | Q8N5K0Q05D90Q9NYU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.69e-13 | 7 |
germ cell | 1.69e-13 | 7 |
bladder cell | 1.20e-07 | 1 |
lower urinary tract cell | 1.20e-07 | 1 |
serous secreting cell | 5.50e-07 | 1 |
epithelial cell of pancreas | 7.20e-07 | 4 |
epithelial cell | 8.15e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 4.86e-14 | 4 |
respiratory system mucosa | 4.86e-14 | 4 |
pituitary gland | 5.60e-13 | 2 |
urinary bladder urothelium | 1.20e-07 | 1 |
wall of urinary bladder | 1.20e-07 | 1 |
mucosa of urinary bladder | 1.20e-07 | 1 |
hepatopancreatic ampulla | 2.23e-07 | 1 |
extrahepatic bile duct | 2.23e-07 | 1 |
common bile duct | 2.23e-07 | 1 |
duodenal papilla | 2.23e-07 | 1 |
mucosa | 2.26e-07 | 20 |
epithelium of female gonad | 5.50e-07 | 1 |
rectum | 6.22e-07 | 4 |
gland of diencephalon | 6.59e-07 | 4 |
neuroendocrine gland | 6.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.40e-22 | 106 |
cell type cancer | 5.77e-19 | 143 |
squamous cell carcinoma | 8.32e-15 | 14 |
adenocarcinoma | 3.80e-14 | 25 |
cancer | 9.27e-12 | 235 |
disease of cellular proliferation | 2.09e-11 | 239 |
female reproductive organ cancer | 2.06e-07 | 27 |
ovary epithelial cancer | 5.50e-07 | 1 |
islet cell tumor | 6.57e-07 | 1 |
endocrine pancreas cancer | 6.57e-07 | 1 |
pancreatic endocrine carcinoma | 6.57e-07 | 1 |
pancreatic cancer | 7.20e-07 | 4 |
reproductive organ cancer | 7.31e-07 | 29 |