FFCP PHASE1:Hg19::chr14:23607321..23607333,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23428 | |EntrezGene=23428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11066 | |HGNC=11066 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_ENST00000528186_5end | |association_with_transcript=86bp_to_ENST00000528186_5end | ||
|cluster_id=chr14:23607321..23607333,- | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_29_at_SLC7A8_5end | |description=CAGE_peak_29_at_SLC7A8_5end | ||
|id=chr14:23607321..23607333,- | |id=chr14:23607321..23607333,- | ||
|ontology_enrichment_celltype=CL:0002586!3.99e-18!3;CL:0000149!9.87e-14!4;CL:0000076!3.14e-09!62;CL:0002623!7.48e-09!3;CL:0000066!4.42e-08!254;CL:0002159!2.09e-07!13;CL:0002251!5.98e-07!21;CL:0000313!9.73e-07!1 | |ontology_enrichment_celltype=CL:0002586!3.99e-18!3;CL:0000149!9.87e-14!4;CL:0000076!3.14e-09!62;CL:0002623!7.48e-09!3;CL:0000066!4.42e-08!254;CL:0002159!2.09e-07!13;CL:0002251!5.98e-07!21;CL:0000313!9.73e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002251;6.00e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,6.30e-11,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.65e-14!14;DOID:3151!3.82e-07!1;DOID:3149!3.82e-07!1;DOID:2152!9.73e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.66e-15;14!DOID:4362;2.66e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.93e-15,14;DOID:4362,2.66e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0001781!3.99e-18!3;UBERON:0001782!3.99e-18!3;UBERON:0005424!3.99e-18!3;UBERON:0000020!1.72e-11!23;UBERON:0000966!4.36e-11!5;UBERON:0005388!4.36e-11!5;UBERON:0001802!4.36e-11!5;UBERON:0001032!5.65e-11!24;UBERON:0004456!5.65e-11!24;UBERON:0001444!1.86e-10!48;UBERON:0000166!1.22e-09!21;UBERON:0001723!1.24e-08!3;UBERON:0001033!1.24e-08!3;UBERON:0010056!1.24e-08!3;UBERON:0007029!2.84e-07!1;UBERON:0000165!4.43e-07!28;UBERON:0000930!4.43e-07!28;UBERON:0000970!4.51e-07!20;UBERON:0003343!4.58e-07!4;UBERON:0004785!4.58e-07!4;UBERON:0000014!8.70e-07!4;UBERON:0004911!9.73e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;6.60e-50;4!UBERON:0004785;6.60e-50;4!UBERON:0000974;9.87e-34;6!UBERON:0001905;7.14e-26;2!UBERON:0002757;7.14e-26;2!UBERON:0010134;7.14e-26;2!UBERON:0005408;7.14e-26;2!UBERON:0001899;7.14e-26;2!UBERON:0003729;3.07e-16;13!UBERON:0003296;1.13e-13;4!UBERON:0010133;1.13e-13;4!UBERON:0002784;1.13e-13;4!UBERON:0000161;1.81e-11;19!UBERON:0000166;1.81e-11;19!UBERON:0000344;6.00e-11;20!UBERON:0000002;1.22e-09;6!UBERON:0001560;1.22e-09;6!UBERON:0001894;2.18e-08;7!UBERON:0000165;4.06e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,8.47e-50,4;UBERON:0004785,8.47e-50,4;UBERON:0001905,5.56e-26,2;UBERON:0002757,5.56e-26,2;UBERON:0010134,5.56e-26,2;UBERON:0005408,5.56e-26,2;UBERON:0001899,5.56e-26,2;UBERON:0000974,1.04e-20,10;UBERON:0003729,3.31e-16,13;UBERON:0003296,1.00e-13,4;UBERON:0010133,1.00e-13,4;UBERON:0002784,1.00e-13,4;UBERON:0000344,6.30e-11,20;UBERON:0000166,4.96e-10,22;UBERON:0000002,1.22e-09,6;UBERON:0001560,1.22e-09,6;UBERON:0001894,2.03e-08,7;UBERON:0006222,2.03e-08,7;UBERON:0000165,7.40e-08,29;UBERON:0000930,7.40e-08,29 | |||
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|short_description=p29@SLC7A8 | |short_description=p29@SLC7A8 | ||
}} | }} |
Latest revision as of 09:04, 19 September 2015
Short description: | p29@SLC7A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_SLC7A8_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | 86bp_to_ENST00000528186_5end |
EntrezGene: | SLC7A8 |
HGNC: | 11066 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 6.30e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 8.47e-50 | 4 |
respiratory system mucosa | 8.47e-50 | 4 |
pineal body | 5.56e-26 | 2 |
regional part of epithalamus | 5.56e-26 | 2 |
secretory circumventricular organ | 5.56e-26 | 2 |
circumventricular organ | 5.56e-26 | 2 |
epithalamus | 5.56e-26 | 2 |
neck | 1.04e-20 | 10 |
mouth mucosa | 3.31e-16 | 13 |
gland of diencephalon | 1.00e-13 | 4 |
neuroendocrine gland | 1.00e-13 | 4 |
regional part of diencephalon | 1.00e-13 | 4 |
mucosa | 6.30e-11 | 20 |
oral opening | 4.96e-10 | 22 |
uterine cervix | 1.22e-09 | 6 |
neck of organ | 1.22e-09 | 6 |
diencephalon | 2.03e-08 | 7 |
future diencephalon | 2.03e-08 | 7 |
mouth | 7.40e-08 | 29 |
stomodeum | 7.40e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.93e-15 | 14 |
cervical cancer | 2.66e-11 | 5 |