FFCP PHASE1:Hg19::chr15:39888341..39888350,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39888341..39888350,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39888341..39888350,+ | |description=CAGE_peak_at_chr15:39888341..39888350,+ | ||
|id=chr15:39888341..39888350,+ | |id=chr15:39888341..39888350,+ | ||
|ontology_enrichment_celltype=CL:0000057!3.34e-16!75;CL:0002371!2.25e-13!591;CL:0000055!1.31e-12!180;CL:0000144!4.51e-12!625;CL:0000548!1.13e-11!679;CL:0000004!1.13e-11!679;CL:0000255!1.13e-11!679;CL:0000012!2.68e-11!682;CL:0000115!4.70e-10!35;CL:0000222!4.72e-10!119;CL:0002139!7.02e-10!24;CL:0000220!1.99e-09!246;CL:0002321!3.97e-09!248;CL:0002620!5.38e-09!23;CL:0002078!1.96e-07!44;CL:0000063!2.62e-07!578;CL:0002334!5.90e-07!12;CL:0000213!7.45e-07!57;CL:0000215!7.45e-07!57;CL:0000003!9.30e-07!722 | |ontology_enrichment_celltype=CL:0000057!3.34e-16!75;CL:0002371!2.25e-13!591;CL:0000055!1.31e-12!180;CL:0000144!4.51e-12!625;CL:0000548!1.13e-11!679;CL:0000004!1.13e-11!679;CL:0000255!1.13e-11!679;CL:0000012!2.68e-11!682;CL:0000115!4.70e-10!35;CL:0000222!4.72e-10!119;CL:0002139!7.02e-10!24;CL:0000220!1.99e-09!246;CL:0002321!3.97e-09!248;CL:0002620!5.38e-09!23;CL:0002078!1.96e-07!44;CL:0000063!2.62e-07!578;CL:0002334!5.90e-07!12;CL:0000213!7.45e-07!57;CL:0000215!7.45e-07!57;CL:0000003!9.30e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002334;3.28e-10;12!CL:0002138;6.71e-10;6!CL:0002580;3.49e-09;3!CL:0002579;1.56e-08;3!CL:0000346;7.93e-08;3!CL:1000428;7.93e-08;3!CL:0000057;4.88e-07;73!CL:0000197;5.06e-07;6!CL:0000098;5.06e-07;6!CL:0002167;5.06e-07;6!CL:0000136;7.28e-07;13!CL:0002620;8.19e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.05e-17,76;CL:0002334,3.33e-10,12;CL:0005020,5.26e-10,6;CL:0002138,5.26e-10,6;CL:0005022,5.26e-10,6;CL:0002580,3.43e-09,3;CL:0002579,1.63e-08,3;CL:0000346,4.71e-08,3;CL:1000428,4.71e-08,3;CL:0000048,4.26e-07,427;CL:0000197,6.65e-07,6;CL:0000098,6.65e-07,6;CL:0002167,6.65e-07,6;CL:0002620,7.30e-07,23;CL:0000723,8.36e-07,433 | |||
|ontology_enrichment_development_v019=CL:0005022;6.71e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.01e-08;5!DOID:450;8.01e-08;5!DOID:66;8.01e-08;5!DOID:423;8.01e-08;5!DOID:0080000;8.01e-08;5!DOID:11722;8.01e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.17e-08,5;DOID:450,9.17e-08,5;DOID:66,9.17e-08,5;DOID:423,9.17e-08,5;DOID:0080000,9.17e-08,5;DOID:11722,9.17e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.91e-15!69;UBERON:0002049!1.44e-13!79;UBERON:0007798!1.44e-13!79;UBERON:0001981!2.98e-13!60;UBERON:0007500!2.98e-13!60;UBERON:0004537!2.98e-13!60;UBERON:0006965!2.98e-13!60;UBERON:0004872!3.71e-12!84;UBERON:0003914!5.66e-12!118;UBERON:0003102!2.52e-11!95;UBERON:0002199!4.66e-11!45;UBERON:0002416!4.66e-11!45;UBERON:0001637!4.69e-11!42;UBERON:0003509!4.69e-11!42;UBERON:0004572!4.69e-11!42;UBERON:0004535!3.27e-10!110;UBERON:0001009!5.15e-10!113;UBERON:0002100!1.02e-09!216;UBERON:0002097!1.31e-09!40;UBERON:0000468!4.61e-09!659;UBERON:0000467!1.25e-08!625;UBERON:0000480!1.61e-08!626;UBERON:0000486!7.77e-08!82;UBERON:0000490!1.44e-07!138;UBERON:0005256!2.60e-07!143;UBERON:0000914!2.96e-07!83;UBERON:0002329!2.96e-07!83;UBERON:0003077!2.96e-07!83;UBERON:0003059!2.96e-07!83;UBERON:0007282!2.96e-07!83;UBERON:0009618!2.96e-07!83;UBERON:0007285!2.96e-07!83;UBERON:0000475!3.91e-07!365;UBERON:0000487!5.50e-07!22;UBERON:0004573!6.02e-07!33;UBERON:0004571!6.02e-07!33;UBERON:0000947!7.90e-07!21;UBERON:0010191!7.90e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.34e-11;6!UBERON:0002358;4.34e-11;6!UBERON:0003684;4.34e-11;6!UBERON:0001178;4.34e-11;6!UBERON:0004573;1.09e-08;33!UBERON:0004571;1.09e-08;33!UBERON:0001637;1.70e-08;42!UBERON:0003509;1.70e-08;42!UBERON:0004572;1.70e-08;42!UBERON:0000055;6.10e-08;65!UBERON:0000412;7.93e-08;3!UBERON:0001992;7.93e-08;3!UBERON:0000947;1.14e-07;21!UBERON:0010191;1.14e-07;21!UBERON:0001473;2.53e-07;8!UBERON:0004536;2.53e-07;8!UBERON:0006558;2.53e-07;8!UBERON:0004457;3.20e-07;9!UBERON:0000042;3.20e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.96e-11,6;UBERON:0002358,4.96e-11,6;UBERON:0003684,4.96e-11,6;UBERON:0001178,4.96e-11,6;UBERON:0000055,1.33e-10,68;UBERON:0001637,6.36e-10,42;UBERON:0003509,6.36e-10,42;UBERON:0004572,6.36e-10,42;UBERON:0004573,7.82e-09,33;UBERON:0004571,7.82e-09,33;UBERON:0002049,1.44e-08,78;UBERON:0007798,1.44e-08,78;UBERON:0000412,4.71e-08,3;UBERON:0001992,4.71e-08,3;UBERON:0000947,1.73e-07,21;UBERON:0010191,1.73e-07,21;UBERON:0001473,2.12e-07,8;UBERON:0004536,2.12e-07,8;UBERON:0006558,2.12e-07,8;UBERON:0004871,4.26e-07,8;UBERON:0007500,5.57e-07,59;UBERON:0001981,5.57e-07,59;UBERON:0004537,5.57e-07,59;UBERON:0006965,5.57e-07,59 | |||
|phase1_expression=2.54349730978779,5.56661362116556,0.704772020479856,6.00439790118782,3.12872766099101,6.10636966870258,2.53299878168311,0.631719873426831,0,0.491467873003018,0.697801167972428,1.31064823278103,1.05506791291381,0.247532705920093,0,5.3786011716142,0.602694528023977,1.46062018077475,2.43966399395253,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0.553995408531877,0.200544447470142,0,0.223915474239924,0,0,0.581592955118259,0,0,1.16214518452842,0,0,2.01384674625505,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0.941211697713023,0.545812300115692,0,0.918251677112708,0,0,0.329851300186716,0,0.426224750532694,2.90209238628584,0,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,2.00535164254356,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0.79504962946682,0,0.694281003215189,0,0.419499436209906,0.550236083880135,1.25396979922086,0.258416759169329,1.06729878806013,1.67360306382335,0.805658634218294,1.52054421143703,0.976248230192678,1.10298924103761,3.24056779152704,0.803697554556718,0.22452937262617,0.112611480483322,0,0,0.732806975721629,0,0,0.436094052142534,5.96366342034382,1.01304409331664,0.926864265692532,1.14734648299525,1.06400514659507,0.560677600142307,2.1349799145941,1.2333377420858,0,0.134710672069688,0.326923806226917,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,0.309977343527296,0,2.22540236350701,0,0,0,0,0,1.31693286264251,2.14541457059314,1.20190447125277,0.340296549480063,2.87023417102179,2.56268866582281,1.05965950579781,1.20036438433761,0.309157587715317,2.83404594050192,0.744467425326359,2.02531598689519,0.68205903612839,1.7670364197088,1.28869858099219,0.646584227275248,3.90510551768276,0.503760491138201,0.508681776931463,0.386521706326594,0.818238361772504,0.286804595389004,0,0,0,0,0,0,1.56449532329816,4.5026865673502,1.38134921352481,0.464367928031979,0.721879481669586,0,0.337169380156203,0.241011029883482,0,0,0.71181185733329,0,0,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0.329250856225877,0,0.201057944823262,0.462942225792648,0,1.03993478527958,0,0,0,1.58803092537181,3.24089858803628,3.04406643575357,0,0,0,0,0,0,1.00789276919316,0.283550194484773,0.53735113621709,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,1.32969058292435,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,3.11956292296211,3.56857977594324,3.46945313074656,1.05427273493442,1.20378439891088,0,0,0,0,0.521301686808497,0,0,0.206768026122887,0,0,0,0,0,4.21783273291921,6.59886485138669,6.73584226639377,2.05022638809122,2.55853624533352,5.79074116116987,4.45254199334973,0.308419387605311,0.887808626565635,0.328508624055237,0,0,0.120859449591622,0.802025881213139,0,0.229628896329213,0,0.393373244878272,0.451199612907412,0,0,0,0,2.27466768141793,0.340187410553031,0.647747748306418,4.62681758070868,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,3.21367859688319,0,0,0.15350367472613,0.137836572484531,0,0.290033387828457,0,0,0.330569830721956,0.384380134730212,0.638063562472921,0,0,3.1481234683064,0,0,0,0.869932992075073,1.11194531462352,0,0,0.316379424718726,0,0.511795582622668,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0.404364963146632,0,0,0,0.487426979262569,1.05650146756755,0.409499734223957,0.424216295861138,1.13008116620243,0,1.32687795048244,1.31535265576129,0,0,0.811641507850816,0.92947049429925,0.281695602532241,0.143411352204052,0.392996164052485,1.07001315444375,0,0.211107635297664,0,0,0,0.288666338176536,0,0,0,1.29151611801369,0,1.33029046061003,1.1486170010348,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0.95497793895076,0.890894042497916,1.84296421259539,0,0,0,0,0,0.398495976502139,0,0,0.20453736500431,0,0.622079175323615,0.718946809178615,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0,0,0.320635281006135,0,0,0,0,0,0.14405479798815,0,0.235694034616795,0,0,0.305994652908965,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.446342914883745,0,3.60299883542404,0,0.0787831823072236,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,2.72620834856675,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p@chr15:39888341..39888350,+ | |short_description=p@chr15:39888341..39888350,+ | ||
}} | }} |
Latest revision as of 01:21, 25 July 2015
Short description: | p@chr15:39888341..39888350, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39888341..39888350, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.05e-17 | 76 |
preadipocyte | 3.33e-10 | 12 |
lymphangioblast | 5.26e-10 | 6 |
endothelial cell of lymphatic vessel | 5.26e-10 | 6 |
vascular lymphangioblast | 5.26e-10 | 6 |
preadipocyte of the breast | 3.43e-09 | 3 |
omentum preadipocyte | 1.63e-08 | 3 |
hair follicle dermal papilla cell | 4.71e-08 | 3 |
stem cell of epidermis | 4.71e-08 | 3 |
multi fate stem cell | 4.26e-07 | 427 |
receptor cell | 6.65e-07 | 6 |
sensory epithelial cell | 6.65e-07 | 6 |
olfactory epithelial cell | 6.65e-07 | 6 |
skin fibroblast | 7.30e-07 | 23 |
somatic stem cell | 8.36e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.96e-11 | 6 |
peritoneum | 4.96e-11 | 6 |
abdominal cavity | 4.96e-11 | 6 |
visceral peritoneum | 4.96e-11 | 6 |
vessel | 1.33e-10 | 68 |
artery | 6.36e-10 | 42 |
arterial blood vessel | 6.36e-10 | 42 |
arterial system | 6.36e-10 | 42 |
systemic artery | 7.82e-09 | 33 |
systemic arterial system | 7.82e-09 | 33 |
vasculature | 1.44e-08 | 78 |
vascular system | 1.44e-08 | 78 |
dermal papilla | 4.71e-08 | 3 |
papillary layer of dermis | 4.71e-08 | 3 |
aorta | 1.73e-07 | 21 |
aortic system | 1.73e-07 | 21 |
lymphatic vessel | 2.12e-07 | 8 |
lymph vasculature | 2.12e-07 | 8 |
lymphatic part of lymphoid system | 2.12e-07 | 8 |
somatic layer of lateral plate mesoderm | 4.26e-07 | 8 |
epithelial tube open at both ends | 5.57e-07 | 59 |
blood vessel | 5.57e-07 | 59 |
blood vasculature | 5.57e-07 | 59 |
vascular cord | 5.57e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.17e-08 | 5 |
myotonic disease | 9.17e-08 | 5 |
muscle tissue disease | 9.17e-08 | 5 |
myopathy | 9.17e-08 | 5 |
muscular disease | 9.17e-08 | 5 |
myotonic dystrophy | 9.17e-08 | 5 |