FFCP PHASE1:Hg19::chr11:134094420..134094447,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23310 | |EntrezGene=23310 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28952 | |HGNC=28952 | ||
|TSSclassifier=strong | |||
|UniProt=E9PR72,E9PJM8,G3V1A9,P42695 | |UniProt=E9PR72,E9PJM8,G3V1A9,P42695 | ||
|association_with_transcript=0bp_to_ENST00000525485,ENST00000526422,ENST00000534532,NM_015261,uc001qhd.1,uc009zda.1,uc010scm.1_5end | |association_with_transcript=0bp_to_ENST00000525485,ENST00000526422,ENST00000534532,NM_015261,uc001qhd.1,uc009zda.1,uc010scm.1_5end | ||
|cluster_id=chr11:134094420..134094447,- | |||
|description=CAGE_peak_2_at_NCAPD3_5end | |description=CAGE_peak_2_at_NCAPD3_5end | ||
|id=chr11:134094420..134094447,- | |id=chr11:134094420..134094447,- | ||
|ontology_enrichment_celltype=CL:0000542!3.91e-16!53;CL:0000051!3.91e-16!53;CL:0000838!5.14e-16!52;CL:0000084!3.58e-10!25;CL:0000827!3.58e-10!25;CL:0000037!4.28e-09!172;CL:0000566!4.28e-09!172;CL:0000791!4.07e-08!18;CL:0000789!4.07e-08!18;CL:0002420!4.07e-08!18;CL:0002419!4.07e-08!18;CL:0000790!4.07e-08!18;CL:0002032!6.95e-08!165;CL:0000837!6.95e-08!165;CL:0000988!7.27e-08!182;CL:0002087!1.73e-07!119;CL:0002031!2.30e-07!124;CL:0000738!6.34e-07!140 | |ontology_enrichment_celltype=CL:0000542!3.91e-16!53;CL:0000051!3.91e-16!53;CL:0000838!5.14e-16!52;CL:0000084!3.58e-10!25;CL:0000827!3.58e-10!25;CL:0000037!4.28e-09!172;CL:0000566!4.28e-09!172;CL:0000791!4.07e-08!18;CL:0000789!4.07e-08!18;CL:0002420!4.07e-08!18;CL:0002419!4.07e-08!18;CL:0000790!4.07e-08!18;CL:0002032!6.95e-08!165;CL:0000837!6.95e-08!165;CL:0000988!7.27e-08!182;CL:0002087!1.73e-07!119;CL:0002031!2.30e-07!124;CL:0000738!6.34e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.48e-10;53!CL:0000084;2.79e-10;25!CL:0000791;2.28e-08;18!CL:0000789;2.28e-08;18!CL:0002419;2.28e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.74e-16,53;CL:0000051,2.74e-16,53;CL:0000838,3.64e-16,52;CL:0000084,3.10e-10,25;CL:0000827,3.10e-10,25;CL:0000037,4.65e-09,168;CL:0000988,3.18e-08,177;CL:0000791,3.97e-08,18;CL:0000789,3.97e-08,18;CL:0002420,3.97e-08,18;CL:0002419,3.97e-08,18;CL:0000790,3.97e-08,18;CL:0002032,7.91e-08,161;CL:0000837,7.91e-08,161;CL:0002087,4.42e-07,115;CL:0002031,7.38e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;2.48e-10;53!CL:0000790;2.28e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.77e-07,51;DOID:0060083,5.77e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.49e-08,114 | |||
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| ||
|short_description=p2@NCAPD3 | |short_description=p2@NCAPD3 | ||
}} | }} |
Latest revision as of 20:28, 16 September 2015
Short description: | p2@NCAPD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NCAPD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000525485, ENST00000526422, ENST00000534532, NM_015261, uc001qhd.1, uc009zda.1, uc010scm.1_5end |
EntrezGene: | NCAPD3 |
HGNC: | 28952 |
UniProt: | E9PR72E9PJM8G3V1A9P42695 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.74e-16 | 53 |
common lymphoid progenitor | 2.74e-16 | 53 |
lymphoid lineage restricted progenitor cell | 3.64e-16 | 52 |
T cell | 3.10e-10 | 25 |
pro-T cell | 3.10e-10 | 25 |
hematopoietic stem cell | 4.65e-09 | 168 |
hematopoietic cell | 3.18e-08 | 177 |
mature alpha-beta T cell | 3.97e-08 | 18 |
alpha-beta T cell | 3.97e-08 | 18 |
immature T cell | 3.97e-08 | 18 |
mature T cell | 3.97e-08 | 18 |
immature alpha-beta T cell | 3.97e-08 | 18 |
hematopoietic oligopotent progenitor cell | 7.91e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.91e-08 | 161 |
nongranular leukocyte | 4.42e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 7.38e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.49e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.77e-07 | 51 |
immune system cancer | 5.77e-07 | 51 |