FFCP PHASE1:Hg19::chr10:3916000..3916035,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:3916000..3916035,-
|short_description=p@chr10:3916000..3916035,-
|description=CAGE_peak_at_chr10:3916000..3916035,-
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:3916000..3916035,- | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr10:3916000..3916035,- | |||
|id=chr10:3916000..3916035,- | |||
|ontology_enrichment_celltype=CL:0000738!1.06e-51!140;CL:0000037!1.62e-47!172;CL:0000566!1.62e-47!172;CL:0000988!5.24e-44!182;CL:0002087!4.33e-43!119;CL:0002032!3.21e-41!165;CL:0000837!3.21e-41!165;CL:0002031!2.34e-39!124;CL:0000542!1.31e-27!53;CL:0000051!1.31e-27!53;CL:0000838!3.75e-26!52;CL:0002057!2.31e-18!42;CL:0002393!3.27e-17!9;CL:0002397!3.27e-17!9;CL:0000860!8.92e-17!45;CL:0000766!1.93e-16!76;CL:0000624!6.95e-16!6;CL:0000763!7.54e-16!112;CL:0000049!7.54e-16!112;CL:0000791!1.20e-15!18;CL:0000789!1.20e-15!18;CL:0002420!1.20e-15!18;CL:0002419!1.20e-15!18;CL:0000790!1.20e-15!18;CL:0000134!3.82e-15!358;CL:0000557!9.77e-15!71;CL:0002320!1.52e-14!365;CL:0000839!1.33e-13!70;CL:0002009!1.34e-13!65;CL:0002194!9.29e-13!63;CL:0000576!9.29e-13!63;CL:0000040!9.29e-13!63;CL:0000559!9.29e-13!63;CL:0000219!1.96e-12!390;CL:0000945!9.49e-12!24;CL:0000826!9.49e-12!24;CL:0000034!4.95e-11!444;CL:0000084!1.60e-10!25;CL:0000827!1.60e-10!25;CL:0000048!1.62e-10!430;CL:0000236!2.07e-10!14;CL:0000723!3.75e-10!436;CL:0000767!2.07e-09!3;CL:0000623!2.50e-09!3;CL:0000825!2.50e-09!3;CL:0000898!1.71e-08!3;CL:0000842!1.05e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000624;8.70e-28;6!CL:0000791;1.14e-22;18!CL:0000789;1.14e-22;18!CL:0002419;1.14e-22;18!CL:0000767;7.40e-22;3!CL:0000623;1.12e-21;3!CL:0002393;5.90e-18;6!CL:0002397;5.90e-18;6!CL:0000084;5.17e-16;25!CL:0000542;3.88e-11;53!CL:0000898;7.84e-10;3!CL:0000094;1.65e-08;8!CL:0000037;3.70e-08;1!CL:0001024;3.70e-08;1!CL:0000895;3.70e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,6.78e-28,6;CL:0000791,9.62e-23,18;CL:0000789,9.62e-23,18;CL:0002420,9.62e-23,18;CL:0002419,9.62e-23,18;CL:0000790,9.62e-23,18;CL:0000767,7.42e-22,3;CL:0000623,1.20e-21,3;CL:0000825,1.20e-21,3;CL:0000738,1.66e-21,136;CL:0000838,2.18e-19,52;CL:0000542,5.65e-19,53;CL:0000051,5.65e-19,53;CL:0000037,2.23e-18,168;CL:0002031,4.89e-18,120;CL:0002032,1.66e-17,161;CL:0000837,1.66e-17,161;CL:0000988,3.21e-17,177;CL:0000084,4.57e-16,25;CL:0000827,4.57e-16,25;CL:0002087,4.53e-15,115;CL:0002393,5.84e-12,9;CL:0002397,5.84e-12,9;CL:0000898,8.21e-10,3;CL:0000094,1.65e-08,8;CL:0001024,2.90e-08,1;CL:0000810,4.11e-08,1;CL:0000895,4.11e-08,1;CL:0002436,4.11e-08,1;CL:0002427,4.11e-08,1;CL:0002428,4.11e-08,1;CL:0002429,4.11e-08,1;CL:0002433,4.11e-08,1;CL:0002431,4.11e-08,1;CL:0002432,4.11e-08,1;CL:0000766,1.96e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;1.14e-22;18!CL:0000051;3.88e-11;53!CL:0002427;3.70e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.47e-16!102;UBERON:0003061!8.47e-16!102;UBERON:0002384!1.00e-13!375;UBERON:0002371!1.03e-13!80;UBERON:0002193!1.19e-13!112;UBERON:0001474!2.68e-12!86;UBERON:0004765!1.61e-09!101;UBERON:0001434!1.61e-09!101;UBERON:0002405!2.70e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,5.11373559903575,6.52509976765262,6.34746105595912,0,0,0,0,0.142169232487422,2.93600439334847,2.21598163412751,1.40381113229099,2.60413044859022,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.47296445977717,0.689491361473237,0.645484683583826,0,0,0,1.12361742222542,0.612167784741805,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0.633765858935825,0.425208599930087,1.04829322754188,0,0.300353785683013,0.48217676009124,0.285012743741249,0,0.547992461293902,0,0.546138611262131,0.889509253863555,1.70692089026603,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,1.52909291250092,6.60856642895129,1.12101712596307,0,2.55722701147983,3.14408610199332,1.85041349099558,0,0.32592226663359,1.89379122293893,0,0.334231370655521,1.47302953737419,1.10766947291811,0,0,0.260118695119756,0,0,0,0.296573126324121,0.535081656179426,0,0,2.29932296161153,2.40539211837841,1.77113784413652,0,0,0,0.301150238155546,0,0,0,0.821127996921047,2.01606743224732,1.87208137048455,2.31719046212478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00883967391873,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3346767244424,6.253199670926,3.7219480521127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0.899895566206002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,5.11373559903575,6.52509976765262,6.34746105595912,0,0,0,0,0.142169232487422,2.93600439334847,2.21598163412751,1.40381113229099,2.60413044859022,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.47296445977717,0.689491361473237,0.645484683583826,0,0,0,1.12361742222542,0.612167784741805,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0,0,0.633765858935825,0.425208599930087,1.04829322754188,0,0.300353785683013,0.48217676009124,0.285012743741249,0,0.547992461293902,0,0.546138611262131,0.889509253863555,1.70692089026603,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,1.52909291250092,6.60856642895129,1.12101712596307,0,2.55722701147983,3.14408610199332,1.85041349099558,0,0.32592226663359,1.89379122293893,0,0.334231370655521,1.47302953737419,1.10766947291811,0,0,0.260118695119756,0,0,0,0.296573126324121,0.535081656179426,0,0,2.29932296161153,2.40539211837841,1.77113784413652,0,0,0,0.301150238155546,0,0,0,0.821127996921047,2.01606743224732,1.87208137048455,2.31719046212478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00883967391873,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3346767244424,6.253199670926,3.7219480521127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0.899895566206002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:3916000..3916035,- | |||
}} | }} |
Latest revision as of 13:38, 23 July 2015
Short description: | p@chr10:3916000..3916035, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3916000..3916035, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data