FFCP PHASE1:Hg19::chr12:10460489..10460500,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3824 | |EntrezGene=3824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6378 | |HGNC=6378 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000538997_5end | |association_with_transcript=-43bp_to_ENST00000538997_5end | ||
|cluster_id=chr12:10460489..10460500,+ | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_3_at_KLRD1_5end | |description=CAGE_peak_3_at_KLRD1_5end | ||
|id=chr12:10460489..10460500,+ | |id=chr12:10460489..10460500,+ | ||
|ontology_enrichment_celltype=CL:0000625!2.08e-23!11;CL:0000791!1.11e-15!18;CL:0000789!1.11e-15!18;CL:0002420!1.11e-15!18;CL:0002419!1.11e-15!18;CL:0000790!1.11e-15!18;CL:0000738!1.35e-14!140;CL:0002087!1.19e-13!119;CL:0000084!5.86e-12!25;CL:0000827!5.86e-12!25;CL:0002031!6.01e-10!124;CL:0000037!9.06e-10!172;CL:0000566!9.06e-10!172;CL:0000988!1.21e-08!182;CL:0000838!9.54e-08!52;CL:0000623!1.15e-07!3;CL:0000825!1.15e-07!3;CL:0000542!1.62e-07!53;CL:0000051!1.62e-07!53;CL:0000767!1.99e-07!3;CL:0000842!2.94e-07!3;CL:0002032!3.53e-07!165;CL:0000837!3.53e-07!165 | |ontology_enrichment_celltype=CL:0000625!2.08e-23!11;CL:0000791!1.11e-15!18;CL:0000789!1.11e-15!18;CL:0002420!1.11e-15!18;CL:0002419!1.11e-15!18;CL:0000790!1.11e-15!18;CL:0000738!1.35e-14!140;CL:0002087!1.19e-13!119;CL:0000084!5.86e-12!25;CL:0000827!5.86e-12!25;CL:0002031!6.01e-10!124;CL:0000037!9.06e-10!172;CL:0000566!9.06e-10!172;CL:0000988!1.21e-08!182;CL:0000838!9.54e-08!52;CL:0000623!1.15e-07!3;CL:0000825!1.15e-07!3;CL:0000542!1.62e-07!53;CL:0000051!1.62e-07!53;CL:0000767!1.99e-07!3;CL:0000842!2.94e-07!3;CL:0002032!3.53e-07!165;CL:0000837!3.53e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.79e-52;11!CL:0000791;6.06e-37;18!CL:0000789;6.06e-37;18!CL:0002419;6.06e-37;18!CL:0000084;7.17e-26;25!CL:0000623;1.12e-15;3!CL:0000767;4.22e-15;3!CL:0000226;1.06e-14;3!CL:0000842;1.06e-14;3!CL:0000542;3.15e-09;53!CL:0002393;2.43e-07;6!CL:0002397;2.43e-07;6!CL:0002087;4.46e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.72e-52,11;CL:0000791,6.06e-37,18;CL:0000789,6.06e-37,18;CL:0002420,6.06e-37,18;CL:0002419,6.06e-37,18;CL:0000790,6.06e-37,18;CL:0000084,7.17e-26,25;CL:0000827,7.17e-26,25;CL:0000838,6.13e-18,52;CL:0000738,1.06e-17,136;CL:0000542,1.55e-17,53;CL:0000051,1.55e-17,53;CL:0000623,1.12e-15,3;CL:0000825,1.12e-15,3;CL:0000767,3.93e-15,3;CL:0002087,5.80e-15,115;CL:0000226,9.68e-15,3;CL:0000842,9.68e-15,3;CL:0000037,3.17e-13,168;CL:0000988,2.93e-12,177;CL:0002031,4.91e-10,120;CL:0002032,2.40e-09,161;CL:0000837,2.40e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000790;6.06e-37;18!CL:0000051;3.15e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.03e-28!115;UBERON:0000178!1.52e-18!15;UBERON:0000179!1.52e-18!15;UBERON:0000463!1.52e-18!15;UBERON:0002390!1.39e-12!102;UBERON:0003061!1.39e-12!102;UBERON:0002193!1.85e-12!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.65e-42;15!UBERON:0000179;1.65e-42;15!UBERON:0000463;1.65e-42;15!UBERON:0002390;1.26e-20;32!UBERON:0002193;6.79e-12;42!UBERON:0000007;2.23e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.57e-42,15;UBERON:0000179,1.57e-42,15;UBERON:0000463,1.57e-42,15;UBERON:0002390,4.58e-11,98;UBERON:0003061,4.58e-11,98;UBERON:0000007,1.98e-10,2;UBERON:0002193,1.08e-09,108 | |||
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| ||
|short_description=p3@KLRD1 | |short_description=p3@KLRD1 | ||
}} | }} |
Latest revision as of 23:43, 15 September 2015
Short description: | p3@KLRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KLRD1_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -43bp_to_ENST00000538997_5end |
EntrezGene: | KLRD1 |
HGNC: | 6378 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.72e-52 | 11 |
mature alpha-beta T cell | 6.06e-37 | 18 |
alpha-beta T cell | 6.06e-37 | 18 |
immature T cell | 6.06e-37 | 18 |
mature T cell | 6.06e-37 | 18 |
immature alpha-beta T cell | 6.06e-37 | 18 |
T cell | 7.17e-26 | 25 |
pro-T cell | 7.17e-26 | 25 |
lymphoid lineage restricted progenitor cell | 6.13e-18 | 52 |
leukocyte | 1.06e-17 | 136 |
lymphocyte | 1.55e-17 | 53 |
common lymphoid progenitor | 1.55e-17 | 53 |
natural killer cell | 1.12e-15 | 3 |
pro-NK cell | 1.12e-15 | 3 |
basophil | 3.93e-15 | 3 |
nongranular leukocyte | 5.80e-15 | 115 |
single nucleate cell | 9.68e-15 | 3 |
mononuclear cell | 9.68e-15 | 3 |
hematopoietic stem cell | 3.17e-13 | 168 |
hematopoietic cell | 2.93e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 4.91e-10 | 120 |
hematopoietic oligopotent progenitor cell | 2.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.40e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.57e-42 | 15 |
haemolymphatic fluid | 1.57e-42 | 15 |
organism substance | 1.57e-42 | 15 |
hematopoietic system | 4.58e-11 | 98 |
blood island | 4.58e-11 | 98 |
pituitary gland | 1.98e-10 | 2 |
hemolymphoid system | 1.08e-09 | 108 |