FFCP PHASE1:Mm9::chr9:58160797..58160811,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16949 | |EntrezGene=16949 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q4QQJ7 | |UniProt=Q4QQJ7 | ||
|association_with_transcript=179bp_to_ENSMUST00000167425_5end | |association_with_transcript=179bp_to_ENSMUST00000167425_5end | ||
|cluster_id=chr9:58160797..58160811,- | |||
|description=CAGE_peak_4_at_Loxl1_5end | |description=CAGE_peak_4_at_Loxl1_5end | ||
|id=chr9:58160797..58160811,- | |id=chr9:58160797..58160811,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.96e-09,10;CL:0000095,1.96e-09,10;CL:0000243,1.96e-09,10;CL:0000123,1.96e-09,10;CL:0000125,1.96e-09,10;CL:0000030,1.96e-09,10;CL:0000339,1.96e-09,10;CL:0000680,3.39e-09,6;CL:0000187,3.39e-09,6;CL:0000056,3.39e-09,6;CL:0000128,5.22e-08,6;CL:0000126,5.22e-08,6;CL:0000127,5.22e-08,6;CL:0002453,1.01e-07,8;CL:0000222,1.12e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,7.70e-07,23;UBERON:0001009,7.70e-07,23 | |||
|phase1_expression=0.640595388419176,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.510259740906419,0.198581902401771,0.261199789138935,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9673722514845,13.4831318521954,8.25960384727567,17.2126095756569,1.74420125104357,20.4308149943059,16.1376816231655,1.95980990275508,4.31257693094915,0,0,0,18.7799388306241,44.4126831905073,19.5955395065428,0,0,0,4.06613438482959,1.77858959222228,7.64914759689189,11.8663963508037,4.9733608046227,4.79360176829448,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,1.28734528666413,7.93501381121248,0.579728977403356,0,0,0,0,0,1.40444420131752,19.4290567738986,8.3131521472918,11.3068663843309,0.14084341977668,6.41632387071589,10.1922095882658,0,0,0.253359865475099,0,0.11418387971906,0,0.890652834388949,0,0.304465478312141,0.461230994512117,0.452167921657868,0.705532242814229,2.13633205260448,0.494389935468748,5.63937491987655,0.884610551949874,2.58826959915855,1.54589062922275,0.969750506270444,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,1.12023300235348,1.99051152976149,0.505445516867349,0.841767423545896,0.390361328888111,0,0.360124259610698,0.150704817835715,0.544291993210623,0.896796041993948,1.12442069471675,1.29351685369508,0,0,0,0,0,1.0447564995665,0.61734640922383,0.59710280045548,0,0,0,0.207125772535502,0,0.540186184383045,0.23674473558521,0.196764231747404,0.308534225774757,0,0.536546802799238,0.350296027101508,1.31647879930784,1.47750717671186,3.16168357228837,1.75439984910399,2.63460138349261,2.41571553768669,0,0.102904612379284,0,0.264450566663544,0,0,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0.610953983535943,0,0.561086559122548,1.45444035385792,0.738050739898011,1.255989822731,0.616985819609003,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0.717589654087649,0,1.66277871149944,0,0.162964976442026,0,0,1.00503754465089,1.42826184531608,2.34160377429359,2.20689201748667,3.98636441367795,3.82691444777969,1.80249646187312,4.83517949224508,3.61622646453779,0,0,0.983528546038072,1.37968373152366,0.321101179975584,0.117211686592203,6.55739781506702,3.02965112645248,0.315508219416257,0,0.215423397732799,0,0,0,0.809621403349789,0.292255857911312,0,0,0.425820255624806,0,0.81443479676788,0.164970122972535,0,0,0,0.565815239267694,0.590603785761546,0.307435147943927,1.29214146584111,0,1.78248689192361,0.948110273807448,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0.535106452806212,0.658196082408484,0.913394847343798,0,0.42366414172764,0.220528398054962,1.31909002353184,1.61464426695906,3.01564624640779,1.90995750405018,1.47726809770555,0,0,0,0.412773735926445,0.370389054739423,0.753473828018764,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,1.75323650300267,1.40510874733071,1.04702376793612,0.777689839750757,0,0.56369293868419,0.299033092087958,0.330916980914195,0.777804753376191,0.516639293910924,0.844780627453891,0.234714477291508,0.651021924219751,0.419437377702843,0.483168241652012,0,0.316011120628178,0,0,0.129920822977795,0.179026695667481,0.198681354781265,1.20195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0,0.453460767230423,0,0,0.335769232728157,1.73870634628971,7.13193406714492,0.549454872801795,0.643105137237198,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,1.92551525755089,0.505394423527595,0.760437899670719,0.754505365544305,1.31098110457835,0.960377286073039,0.804096565378586,0,1.0429589335037,0.964546102318525,0.824171801606613,0.883193520806384,1.02860775715625,0.887379030796687,0.715308569841963,0.581385666529314,1.12931256498397,0.676916863133412,0.548783918618318,0.263069711437843,0.814824683075171,0.561142271657738,0.237270036248348,1.18205378850676,0.409231043169689,1.23949472948773,1.15743966588685,0,0.233931608445408,3.22306581072447,1.72159498861959,4.41182838239031,5.33296021926969 | |phase1_expression=0.640595388419176,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.510259740906419,0.198581902401771,0.261199789138935,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9673722514845,13.4831318521954,8.25960384727567,17.2126095756569,1.74420125104357,20.4308149943059,16.1376816231655,1.95980990275508,4.31257693094915,0,0,0,18.7799388306241,44.4126831905073,19.5955395065428,0,0,0,4.06613438482959,1.77858959222228,7.64914759689189,11.8663963508037,4.9733608046227,4.79360176829448,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,1.28734528666413,7.93501381121248,0.579728977403356,0,0,0,0,0,1.40444420131752,19.4290567738986,8.3131521472918,11.3068663843309,0.14084341977668,6.41632387071589,10.1922095882658,0,0,0.253359865475099,0,0.11418387971906,0,0.890652834388949,0,0.304465478312141,0.461230994512117,0.452167921657868,0.705532242814229,2.13633205260448,0.494389935468748,5.63937491987655,0.884610551949874,2.58826959915855,1.54589062922275,0.969750506270444,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,1.12023300235348,1.99051152976149,0.505445516867349,0.841767423545896,0.390361328888111,0,0.360124259610698,0.150704817835715,0.544291993210623,0.896796041993948,1.12442069471675,1.29351685369508,0,0,0,0,0,1.0447564995665,0.61734640922383,0.59710280045548,0,0,0,0.207125772535502,0,0.540186184383045,0.23674473558521,0.196764231747404,0.308534225774757,0,0.536546802799238,0.350296027101508,1.31647879930784,1.47750717671186,3.16168357228837,1.75439984910399,2.63460138349261,2.41571553768669,0,0.102904612379284,0,0.264450566663544,0,0,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0.610953983535943,0,0.561086559122548,1.45444035385792,0.738050739898011,1.255989822731,0.616985819609003,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0.717589654087649,0,1.66277871149944,0,0.162964976442026,0,0,1.00503754465089,1.42826184531608,2.34160377429359,2.20689201748667,3.98636441367795,3.82691444777969,1.80249646187312,4.83517949224508,3.61622646453779,0,0,0.983528546038072,1.37968373152366,0.321101179975584,0.117211686592203,6.55739781506702,3.02965112645248,0.315508219416257,0,0.215423397732799,0,0,0,0.809621403349789,0.292255857911312,0,0,0.425820255624806,0,0.81443479676788,0.164970122972535,0,0,0,0.565815239267694,0.590603785761546,0.307435147943927,1.29214146584111,0,1.78248689192361,0.948110273807448,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0.535106452806212,0.658196082408484,0.913394847343798,0,0.42366414172764,0.220528398054962,1.31909002353184,1.61464426695906,3.01564624640779,1.90995750405018,1.47726809770555,0,0,0,0.412773735926445,0.370389054739423,0.753473828018764,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,1.75323650300267,1.40510874733071,1.04702376793612,0.777689839750757,0,0.56369293868419,0.299033092087958,0.330916980914195,0.777804753376191,0.516639293910924,0.844780627453891,0.234714477291508,0.651021924219751,0.419437377702843,0.483168241652012,0,0.316011120628178,0,0,0.129920822977795,0.179026695667481,0.198681354781265,1.20195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0,0.453460767230423,0,0,0.335769232728157,1.73870634628971,7.13193406714492,0.549454872801795,0.643105137237198,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,1.92551525755089,0.505394423527595,0.760437899670719,0.754505365544305,1.31098110457835,0.960377286073039,0.804096565378586,0,1.0429589335037,0.964546102318525,0.824171801606613,0.883193520806384,1.02860775715625,0.887379030796687,0.715308569841963,0.581385666529314,1.12931256498397,0.676916863133412,0.548783918618318,0.263069711437843,0.814824683075171,0.561142271657738,0.237270036248348,1.18205378850676,0.409231043169689,1.23949472948773,1.15743966588685,0,0.233931608445408,3.22306581072447,1.72159498861959,4.41182838239031,5.33296021926969 | ||
|short_description=p4@Loxl1 | |short_description=p4@Loxl1 | ||
}} | }} |
Latest revision as of 22:15, 26 September 2015
Short description: | p4@Loxl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Loxl1_5end |
Coexpression cluster: | NA |
Association with transcript: | 179bp_to_ENSMUST00000167425_5end |
EntrezGene: | Loxl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.96e-09 | 10 |
neuron associated cell | 1.96e-09 | 10 |
glial cell (sensu Vertebrata) | 1.96e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 1.96e-09 | 10 |
glial cell | 1.96e-09 | 10 |
glioblast | 1.96e-09 | 10 |
glioblast (sensu Vertebrata) | 1.96e-09 | 10 |
muscle precursor cell | 3.39e-09 | 6 |
muscle cell | 3.39e-09 | 6 |
myoblast | 3.39e-09 | 6 |
oligodendrocyte | 5.22e-08 | 6 |
macroglial cell | 5.22e-08 | 6 |
astrocyte | 5.22e-08 | 6 |
oligodendrocyte precursor cell | 1.01e-07 | 8 |
mesodermal cell | 1.12e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 7.70e-07 | 23 |
circulatory system | 7.70e-07 | 23 |