FFCP PHASE1:Hg19::chr12:11421586..11421606,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5544 | |EntrezGene=5544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=9339 | |HGNC=9339 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=66bp_to_ENST00000539835_5end | |association_with_transcript=66bp_to_ENST00000539835_5end | ||
|cluster_id=chr12:11421586..11421606,- | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_2_at_PRB3_5end | |description=CAGE_peak_2_at_PRB3_5end | ||
|id=chr12:11421586..11421606,- | |id=chr12:11421586..11421606,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;6.62e-41;1!UBERON:0006965;5.69e-21;2!UBERON:0004872;6.04e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!6.36e-57!2;UBERON:0001831!7.48e-30!1;UBERON:0001567!7.48e-30!1;UBERON:0008801!7.48e-30!1;UBERON:0001044!6.48e-20!6;UBERON:0003293!6.48e-20!6;UBERON:0003294!6.48e-20!6;UBERON:0010047!6.48e-20!6;UBERON:0000167!6.48e-20!6;UBERON:0003126!4.02e-17!7;UBERON:0001005!4.02e-17!7;UBERON:0001829!1.15e-15!2;UBERON:0004089!1.15e-15!2;UBERON:0000341!1.33e-15!2;UBERON:0003408!2.24e-12!10;UBERON:0001004!3.76e-10!72;UBERON:0007023!4.18e-09!115;UBERON:0007196!4.56e-09!14;UBERON:0001558!4.56e-09!14;UBERON:0005178!3.67e-08!34;UBERON:0002224!3.67e-08!34;UBERON:0005181!6.01e-08!35;UBERON:0001041!1.58e-07!98;UBERON:0008947!2.27e-07!38;UBERON:0003258!2.27e-07!38;UBERON:0000078!2.68e-07!18;UBERON:0000464!4.18e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;6.62e-41;1!UBERON:0001567;6.62e-41;1!UBERON:0001044;2.38e-27;6!UBERON:0003293;2.38e-27;6!UBERON:0003294;2.38e-27;6!UBERON:0010047;2.38e-27;6!UBERON:0003408;2.38e-27;6!UBERON:0000167;2.38e-27;6!UBERON:0001829;3.11e-21;2!UBERON:0004089;3.11e-21;2!UBERON:0000341;3.81e-21;2!UBERON:0003127;5.69e-21;2!UBERON:0001041;2.24e-12;14!UBERON:0000161;2.17e-09;19!UBERON:0000166;2.17e-09;19!UBERON:0000974;5.92e-08;6!UBERON:0003126;6.04e-07;7!UBERON:0001005;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,6.62e-41,1;UBERON:0001567,6.62e-41,1;UBERON:0008801,6.62e-41,1;UBERON:0001044,2.72e-27,6;UBERON:0003293,2.72e-27,6;UBERON:0003294,2.72e-27,6;UBERON:0010047,2.72e-27,6;UBERON:0000167,2.72e-27,6;UBERON:0001829,3.11e-21,2;UBERON:0004089,3.11e-21,2;UBERON:0000341,3.81e-21,2;UBERON:0003127,4.66e-21,2;UBERON:0003408,7.51e-17,10;UBERON:0007023,2.58e-09,114;UBERON:0000166,3.15e-08,22;UBERON:0003126,5.70e-07,7;UBERON:0001005,5.70e-07,7 | |||
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|short_description=p2@PRB3 | |short_description=p2@PRB3 | ||
}} | }} |
Latest revision as of 13:26, 16 September 2015
Short description: | p2@PRB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRB3_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 66bp_to_ENST00000539835_5end |
EntrezGene: | PRB3 |
HGNC: | 9339 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parotid gland | 6.62e-41 | 1 |
cheek | 6.62e-41 | 1 |
parotid gland primordium | 6.62e-41 | 1 |
saliva-secreting gland | 2.72e-27 | 6 |
gland of oral region | 2.72e-27 | 6 |
gland of foregut | 2.72e-27 | 6 |
oral gland | 2.72e-27 | 6 |
oral cavity | 2.72e-27 | 6 |
major salivary gland | 3.11e-21 | 2 |
midface | 3.11e-21 | 2 |
throat | 3.81e-21 | 2 |
open tracheal system trachea | 4.66e-21 | 2 |
gland of gut | 7.51e-17 | 10 |
adult organism | 2.58e-09 | 114 |
oral opening | 3.15e-08 | 22 |
trachea | 5.70e-07 | 7 |
respiratory airway | 5.70e-07 | 7 |