FFCP PHASE1:Hg19::chr17:40556543..40556580,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:40556543..40556580,+ | |||
|description=CAGE_peak_at_chr17:40556543..40556580,+ | |description=CAGE_peak_at_chr17:40556543..40556580,+ | ||
|id=chr17:40556543..40556580,+ | |id=chr17:40556543..40556580,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.61e-24!180;CL:0000057!8.60e-16!75;CL:0000222!3.77e-14!119;CL:0000220!3.50e-11!246;CL:0002321!9.28e-11!248;CL:0000680!9.31e-11!57;CL:0000056!9.31e-11!57;CL:0000355!9.31e-11!57;CL:0000183!1.21e-10!59;CL:0000187!6.83e-10!54;CL:0002371!1.32e-09!591;CL:0000144!1.66e-09!625;CL:0002620!4.68e-09!23;CL:0000548!5.61e-09!679;CL:0000004!5.61e-09!679;CL:0000255!5.61e-09!679;CL:0000012!1.61e-08!682;CL:0000393!3.84e-08!60;CL:0000211!3.84e-08!60;CL:0000192!1.80e-07!42;CL:0000514!1.80e-07!42 | |ontology_enrichment_celltype=CL:0000055!9.61e-24!180;CL:0000057!8.60e-16!75;CL:0000222!3.77e-14!119;CL:0000220!3.50e-11!246;CL:0002321!9.28e-11!248;CL:0000680!9.31e-11!57;CL:0000056!9.31e-11!57;CL:0000355!9.31e-11!57;CL:0000183!1.21e-10!59;CL:0000187!6.83e-10!54;CL:0002371!1.32e-09!591;CL:0000144!1.66e-09!625;CL:0002620!4.68e-09!23;CL:0000548!5.61e-09!679;CL:0000004!5.61e-09!679;CL:0000255!5.61e-09!679;CL:0000012!1.61e-08!682;CL:0000393!3.84e-08!60;CL:0000211!3.84e-08!60;CL:0000192!1.80e-07!42;CL:0000514!1.80e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.57e-10;23!CL:0002494;3.38e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.91e-14,76;CL:0002620,2.12e-10,23;CL:0000222,1.18e-09,121;CL:0000048,4.70e-08,427;CL:0000680,1.03e-07,58;CL:0000056,1.03e-07,58;CL:0000355,1.03e-07,58;CL:0000723,1.18e-07,433;CL:0002494,1.29e-07,16;CL:0000034,3.82e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.47e-08;5!DOID:450;8.47e-08;5!DOID:66;8.47e-08;5!DOID:423;8.47e-08;5!DOID:0080000;8.47e-08;5!DOID:11722;8.47e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.07e-08,5;DOID:450,5.07e-08,5;DOID:66,5.07e-08,5;DOID:423,5.07e-08,5;DOID:0080000,5.07e-08,5;DOID:11722,5.07e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000486!1.38e-13!82;UBERON:0000914!6.18e-13!83;UBERON:0002329!6.18e-13!83;UBERON:0003077!6.18e-13!83;UBERON:0003059!6.18e-13!83;UBERON:0007282!6.18e-13!83;UBERON:0009618!6.18e-13!83;UBERON:0007285!6.18e-13!83;UBERON:0004872!7.51e-12!84;UBERON:0004290!1.42e-11!70;UBERON:0001134!3.81e-10!61;UBERON:0002036!3.81e-10!61;UBERON:0003082!3.81e-10!61;UBERON:0002385!3.96e-10!63;UBERON:0001015!3.96e-10!63;UBERON:0000383!3.96e-10!63;UBERON:0002049!7.20e-10!79;UBERON:0007798!7.20e-10!79;UBERON:0000055!6.58e-09!69;UBERON:0001981!1.99e-08!60;UBERON:0007500!1.99e-08!60;UBERON:0004537!1.99e-08!60;UBERON:0006965!1.99e-08!60;UBERON:0003914!4.42e-08!118;UBERON:0001009!4.47e-08!113;UBERON:0005256!4.62e-08!143;UBERON:0004535!4.65e-08!110;UBERON:0000490!6.49e-08!138;UBERON:0001637!1.30e-07!42;UBERON:0003509!1.30e-07!42;UBERON:0004572!1.30e-07!42;UBERON:0003102!3.75e-07!95;UBERON:0000468!5.43e-07!659;UBERON:0004923!7.01e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.57e-08;33!UBERON:0004571;2.57e-08;33!UBERON:0007500;8.44e-07;56!UBERON:0001981;8.44e-07;56!UBERON:0004537;8.44e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.22e-12,83;UBERON:0007500,3.32e-10,59;UBERON:0001981,3.32e-10,59;UBERON:0004537,3.32e-10,59;UBERON:0006965,3.32e-10,59;UBERON:0000055,7.43e-10,68;UBERON:0007503,4.05e-09,78;UBERON:0001637,7.44e-09,42;UBERON:0003509,7.44e-09,42;UBERON:0004572,7.44e-09,42;UBERON:0002199,8.12e-09,46;UBERON:0002416,8.12e-09,46;UBERON:0003914,1.10e-08,117;UBERON:0004535,1.16e-08,109;UBERON:0007524,1.47e-08,73;UBERON:0000486,1.89e-08,83;UBERON:0004573,1.94e-08,33;UBERON:0004571,1.94e-08,33;UBERON:0002049,2.23e-08,78;UBERON:0007798,2.23e-08,78;UBERON:0001009,3.43e-08,112;UBERON:0002329,3.61e-08,71;UBERON:0003059,3.61e-08,71;UBERON:0007282,3.61e-08,71;UBERON:0004290,3.61e-08,71;UBERON:0009618,3.61e-08,71;UBERON:0003077,5.78e-08,72;UBERON:0007285,5.78e-08,72;UBERON:0001134,1.33e-07,62;UBERON:0002036,1.33e-07,62;UBERON:0003082,1.33e-07,62;UBERON:0002097,3.42e-07,41;UBERON:0002385,3.46e-07,64;UBERON:0001015,3.46e-07,64;UBERON:0000383,3.46e-07,64 | |||
|phase1_expression=1.45342703416445,0.642301571672949,0.704772020479856,4.00293193412522,2.23480547213644,2.61701557230111,5.06599756336621,0,0.522371256399677,1.22866968250754,1.39560233594486,0,0,1.60896258848061,1.32558950291166,2.6893005858071,2.41077811209591,2.19093027116212,1.46379839637152,0.246242116153576,0.408001382488506,1.56727360739044,0.286235987131057,0.684372125364421,0.753255837568817,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,3.19656404608826,1.0843174571537,1.00267582127178,2.02785126545153,0,0.486634870302636,0.945348171640679,0.665188192387692,0.351339142772504,0.327447688744282,0,0.741568885568859,0,0,0,0,0,0,0,1.72046919021225,0.347140501607594,0,0.838998872419812,2.47606237746061,0.208994966536811,3.35941786920128,0.71153252537342,0.66944122552934,1.61131726843659,0,2.19655851793353,1.47065232138347,3.24056779152704,0.446498641420399,0.673588117878509,0.337834441449967,3.06633274931766,0,1.09921046358244,0,0,0,1.98788780678127,1.2663051166458,1.19168262731897,0.860509862246441,0.354668382198357,1.12135520028461,1.06748995729705,0.98667019366864,0,0.942974704487816,1.30769522490767,0.302714855289863,0,0,0.936480230490962,0.570471821544449,1.19558944441441,0.587172493218824,1.45685649931318,0.702254033511242,0.61246251376468,0.859840221182376,0,1.18800285728205,0.494533858557114,0,0,0.841680569770331,0,0,0.877955241761676,1.83892677479412,1.65261864797256,1.13432183160021,1.25572744982203,1.49490172172997,1.90738711043606,2.10063767259082,1.44273540933814,2.31876486041066,1.48893485065272,1.85653965465393,1.16924406193438,1.51460264546469,0.460249493211497,0.646584227275248,0.355009592516614,1.61203357164224,2.88253006927829,0.193260853163297,0.545492241181669,0,0,0,0.116193942869518,0,0.252320850875628,0,0,1.92972281457866,0,2.3218396401599,2.16563844500876,0.709840800239063,0.168584690078102,1.44606617930089,0.661763836394364,1.30727666455444,0.237270619111097,0.539325232640658,0.392442930250692,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,1.02940686179115,0.658501712451753,0,0.402115889646523,0.370353780634118,0.325808305310325,3.11980435583874,0,0.231860809950154,0.587043471179108,0.721832238805369,1.38895653772983,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0.283550194484773,0.0895585227028483,0.871901815541886,0.383382679165211,0,0,0,0.288239906833923,0,0.253991577168676,0,0,0,0.205654985406647,1.20137223137567,0,0.224262168690721,0,0.36669142910475,0.646358578788889,0,0,2.39344304926383,2.08014873822732,1.80045161983499,1.41849132023278,1.0656887160644,0.57191197463259,0,0,0.65147236858747,0,0,1.80863626235752,0,0.899756920638513,0,0,0,1.91699884393266,1.14861935834114,0,1.59259437334337,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,1.08506009479894,6.44709670745502,6.42344359669782,4.41566762095017,1.28855556491985,0.300946099727719,0,0,3.32112799267718,0.737476674166813,0.955719759148911,0.783204629850962,0.686286847621712,0,0,0,0.909382714338778,1.66435439510497,0.907170879989041,0.744323423456331,2.60885354589706,1.96462066103151,0.768834895534206,0.511707249066704,0.965123526861645,1.48418066444991,1.07946785661859,1.42049380250502,0.492762936082855,0,1.97557643381931,0,0.40101294060657,0,1.26295892981067,0.546273504020151,0.262248829918848,0.451199612907412,0.15403067420883,0.784349769176855,0,0,1.13733384070897,1.70093705276516,0,0,0.541892875087706,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0.650756789328606,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0.580024309752732,1.23238893691716,0.921022048356777,0.689182862422653,0.537101224341368,0.870100163485371,0.93749290157711,0.712256285173899,0.330569830721956,0.384380134730212,0.765676274967505,0.10115778085555,1.39453664789186,0.31481234683064,0,0.924100740528266,0,0,0.55597265731176,0,0.744316738719335,0,0.38126038784765,1.79128453917934,0,1.27281299170375,0,1.61885211824983,2.19629623788844,0.706874414074119,0,3.17020642346017,1.26377536871694,0.48763373908959,1.21856744815642,1.05650146756755,0.682499557039929,0.282810863907425,2.26016233240486,0,1.99031692572366,0.876901770507525,0.578775534266688,1.31178950409327,0.202910376962704,0.6196469961995,0.845086807596724,0.430234056612155,2.06322986127554,0,0,4.01104507065562,3.29294892959902,0,0.699869440489966,0,0,1.08890984861323,0.188287601553558,0.86101074534246,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.534120355637366,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.71623345421307,0.890894042497916,0.307160702099232,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.20453736500431,0,0.933118762985422,0.0898683511473268,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p@chr17:40556543..40556580,+ | |short_description=p@chr17:40556543..40556580,+ | ||
}} | }} |
Latest revision as of 17:01, 25 July 2015
Short description: | p@chr17:40556543..40556580, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:40556543..40556580, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.91e-14 | 76 |
skin fibroblast | 2.12e-10 | 23 |
mesodermal cell | 1.18e-09 | 121 |
multi fate stem cell | 4.70e-08 | 427 |
muscle precursor cell | 1.03e-07 | 58 |
myoblast | 1.03e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.03e-07 | 58 |
somatic stem cell | 1.18e-07 | 433 |
cardiocyte | 1.29e-07 | 16 |
stem cell | 3.82e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.07e-08 | 5 |
myotonic disease | 5.07e-08 | 5 |
muscle tissue disease | 5.07e-08 | 5 |
myopathy | 5.07e-08 | 5 |
muscular disease | 5.07e-08 | 5 |
myotonic dystrophy | 5.07e-08 | 5 |