FFCP PHASE1:Hg19::chr12:12522676..12522678,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:12522676..12522678,+ | |||
|description=CAGE_peak_at_chr12:12522676..12522678,+ | |description=CAGE_peak_at_chr12:12522676..12522678,+ | ||
|id=chr12:12522676..12522678,+ | |id=chr12:12522676..12522678,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.99e-10!52;CL:0000542!4.75e-10!53;CL:0000051!4.75e-10!53;CL:0000084!1.85e-07!25;CL:0000827!1.85e-07!25;CL:0000738!1.93e-07!140;CL:0000624!2.09e-07!6;CL:0002031!3.07e-07!124;CL:0000791!3.25e-07!18;CL:0000789!3.25e-07!18;CL:0002420!3.25e-07!18;CL:0002419!3.25e-07!18;CL:0000790!3.25e-07!18;CL:0002087!6.70e-07!119 | |ontology_enrichment_celltype=CL:0000838!1.99e-10!52;CL:0000542!4.75e-10!53;CL:0000051!4.75e-10!53;CL:0000084!1.85e-07!25;CL:0000827!1.85e-07!25;CL:0000738!1.93e-07!140;CL:0000624!2.09e-07!6;CL:0002031!3.07e-07!124;CL:0000791!3.25e-07!18;CL:0000789!3.25e-07!18;CL:0002420!3.25e-07!18;CL:0002419!3.25e-07!18;CL:0000790!3.25e-07!18;CL:0002087!6.70e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000624;4.34e-12;6!CL:0000791;1.64e-10;18!CL:0000789;1.64e-10;18!CL:0002419;1.64e-10;18!CL:0000895;5.09e-09;1!CL:0000084;1.63e-07;25!CL:0000542;8.02e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.03e-12,6;CL:0000791,1.20e-10,18;CL:0000789,1.20e-10,18;CL:0002420,1.20e-10,18;CL:0002419,1.20e-10,18;CL:0000790,1.20e-10,18;CL:0000810,5.75e-09,1;CL:0000895,5.75e-09,1;CL:0002436,5.75e-09,1;CL:0002427,5.75e-09,1;CL:0002428,5.75e-09,1;CL:0002429,5.75e-09,1;CL:0002433,5.75e-09,1;CL:0002431,5.75e-09,1;CL:0002432,5.75e-09,1;CL:0000838,1.70e-08,52;CL:0000542,2.58e-08,53;CL:0000051,2.58e-08,53;CL:0000084,1.30e-07,25;CL:0000827,1.30e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.64e-10;18!CL:0002427;5.09e-09;1!CL:0000051;8.02e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;5.09e-09;1!DOID:10165;5.09e-09;1!DOID:1798;5.09e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,8.49e-09,1;DOID:10165,8.49e-09,1;DOID:1798,8.49e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.86e-19!57;UBERON:0005068!3.86e-19!57;UBERON:0006241!3.86e-19!57;UBERON:0007135!3.86e-19!57;UBERON:0007023!1.33e-16!115;UBERON:0003080!1.92e-16!42;UBERON:0002780!1.64e-15!41;UBERON:0001890!1.64e-15!41;UBERON:0006240!1.64e-15!41;UBERON:0002346!1.76e-15!90;UBERON:0002616!1.88e-14!59;UBERON:0003075!3.69e-14!86;UBERON:0007284!3.69e-14!86;UBERON:0002020!2.85e-13!34;UBERON:0003528!2.85e-13!34;UBERON:0001893!5.61e-13!34;UBERON:0001017!1.34e-12!82;UBERON:0002791!1.86e-12!33;UBERON:0005743!3.46e-12!86;UBERON:0001869!7.75e-12!32;UBERON:0000955!1.22e-11!69;UBERON:0006238!1.22e-11!69;UBERON:0000073!6.85e-11!94;UBERON:0001016!6.85e-11!94;UBERON:0003056!1.22e-09!61;UBERON:0002308!7.27e-09!9;UBERON:0000125!7.27e-09!9;UBERON:0009663!1.41e-07!7;UBERON:0000956!3.68e-07!25;UBERON:0000203!3.68e-07!25;UBERON:0002420!8.26e-07!9;UBERON:0007245!8.26e-07!9;UBERON:0010009!8.26e-07!9;UBERON:0010011!8.26e-07!9;UBERON:0000454!8.26e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;5.09e-09;1!UBERON:0002171;5.09e-09;1!UBERON:0006518;5.09e-09;1!UBERON:0008949;5.09e-09;1!UBERON:0000101;5.09e-09;1!UBERON:0002167;5.09e-09;1!UBERON:0002784;1.30e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.82e-09,1;UBERON:0006518,2.82e-09,1;UBERON:0008949,2.82e-09,1;UBERON:0000101,2.82e-09,1;UBERON:0002167,2.82e-09,1;UBERON:0001874,4.19e-09,1;UBERON:0002784,2.58e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.534893840235659,0.57470412614962,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0.293600439334847,1.10799081706375,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0.16072558669708,0.570025487482497,0.19891667719909,0,0,1.09227722252426,0.889509253863555,0,0,0,0,0,1.70763890732835,0,0.764546456250458,0,0.560508562981536,0.263384084775077,1.96709770113833,1.17903228824749,0.205601498999509,0,0.977766799900771,1.89379122293893,0,0.111410456885174,0.883817722424512,0,0.812411591295047,0.384273959177026,0.650296737799391,0.164437904603676,0,0,0,0,0,0,1.14966148080576,1.03088233644789,1.01207876807801,0.637130828648193,0.651083453856419,0,0,0,0,0.236777252044017,0,0.604820229674197,1.33720097891754,1.15859523106239,0,0,0,0,0,0,0.795285947051099,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.394061520403854,2.37190332345469,0.513372145118994,0,0,0,0,1.27587750330633,0.749007023947182,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,1.28073069364133,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,0.106824071127473,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0.146508179271894,0.242721043499027,0.111443384277478,0,0.23874448473769,0,0,0,0.140669416410513,0,0.16480387422676,0.211125408127993,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,2.17499872630438,0.341380344856499,0,0,0,0.291604613383254,0.173624994933292,0.885741385813839,0.844175070377856,0,0.663475559587348,0.591095237907095,0.219385397153973,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0,0,0.296521128680622,0,0.104421949505455,0.134802265961354,0.802577647298789,0.234264445725339,0.364909578431332,0,0,0.789168805698781,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0.0870592065804026,0.34945333648406,0,0,0.0730893170861856,0.164230914106418,0,0,0.677942222341597,0.137041924646751,0.19871461170299,0.316553979779393,0,0,0,0,0,0.114536596165916,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,1.09524303113594,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,2.38568906942791,0.544813624446302,0,0,0,0.2249738915515,0,0.303747783290123,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0.258565912723101,0.26446520348538,0,0,0.106787412567695,0,1.65695622138878,0.496166021811951,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0.625954653532499,0.573409195690071,0.221858103073705,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0.850299680406731,0.495743057036009,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.478901577171454,0.615349092722265,0.756215088665154,0,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0.147856086217045,0.202612753855184,0,0,0.253663240775627,0.546974809018219,0,0.496211178389294,0.175871244359621,0,0,1.00885116665647,0.606965604236632,0.455324382702595,0,0,0,0,0,0,0,0,1.25692471932802,0,0,0,0,0.357382720883282,0,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.447421727191169,0.098150233615243,0.121917924982269,0,0,0,0,0,0.596852325484105,0,0.11294608203896,0.109940516745429,0,0.154348316215889,0,0,0,0,0.392616934229891,0.891139200981258,0.4226557275834,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0.573358332605805,0,0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| ||
|short_description=p@chr12:12522676..12522678,+ | |short_description=p@chr12:12522676..12522678,+ | ||
}} | }} |
Latest revision as of 06:28, 24 July 2015
Short description: | p@chr12:12522676..12522678, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:12522676..12522678, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 3.03e-12 | 6 |
mature alpha-beta T cell | 1.20e-10 | 18 |
alpha-beta T cell | 1.20e-10 | 18 |
immature T cell | 1.20e-10 | 18 |
mature T cell | 1.20e-10 | 18 |
immature alpha-beta T cell | 1.20e-10 | 18 |
CD4-positive, alpha-beta thymocyte | 5.75e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 5.75e-09 | 1 |
mature CD4 single-positive thymocyte | 5.75e-09 | 1 |
resting double-positive thymocyte | 5.75e-09 | 1 |
double-positive blast | 5.75e-09 | 1 |
CD69-positive double-positive thymocyte | 5.75e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 5.75e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 5.75e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 5.75e-09 | 1 |
lymphoid lineage restricted progenitor cell | 1.70e-08 | 52 |
lymphocyte | 2.58e-08 | 53 |
common lymphoid progenitor | 2.58e-08 | 53 |
T cell | 1.30e-07 | 25 |
pro-T cell | 1.30e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.82e-09 | 1 |
right lung lobe | 2.82e-09 | 1 |
lower lobe of lung | 2.82e-09 | 1 |
lobe of lung | 2.82e-09 | 1 |
right lung | 2.82e-09 | 1 |
putamen | 4.19e-09 | 1 |
regional part of diencephalon | 2.58e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 8.49e-09 | 1 |
endocrine pancreas cancer | 8.49e-09 | 1 |
pancreatic endocrine carcinoma | 8.49e-09 | 1 |