FFCP PHASE1:Hg19::chr10:8458599..8458612,+: Difference between revisions
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|id=chr10:8458599..8458612,+
|short_description=p@chr10:8458599..8458612,+
|description=CAGE_peak_at_chr10:8458599..8458612,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:8458599..8458612,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr10:8458599..8458612,+ | |||
|id=chr10:8458599..8458612,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.53e-42!18;CL:0000789!2.53e-42!18;CL:0002420!2.53e-42!18;CL:0002419!2.53e-42!18;CL:0000790!2.53e-42!18;CL:0000084!6.38e-30!25;CL:0000827!6.38e-30!25;CL:0000624!1.59e-27!6;CL:0000838!3.00e-22!52;CL:0000542!8.92e-22!53;CL:0000051!8.92e-22!53;CL:0000623!3.32e-21!3;CL:0000825!3.32e-21!3;CL:0000625!4.08e-21!11;CL:0000738!4.28e-18!140;CL:0002087!6.38e-16!119;CL:0000037!6.17e-14!172;CL:0000566!6.17e-14!172;CL:0002031!2.03e-13!124;CL:0000988!6.19e-13!182;CL:0002032!8.36e-12!165;CL:0000837!8.36e-12!165;CL:0000898!9.30e-10!3;CL:0000767!1.50e-09!3;CL:0000842!3.24e-09!3;CL:0000810!7.97e-08!1;CL:0000895!7.97e-08!1;CL:0002436!7.97e-08!1;CL:0002427!7.97e-08!1;CL:0002428!7.97e-08!1;CL:0002429!7.97e-08!1;CL:0002433!7.97e-08!1;CL:0002431!7.97e-08!1;CL:0002432!7.97e-08!1;CL:0000224!4.03e-07!4;CL:0002393!4.32e-07!9;CL:0002397!4.32e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000623;6.99e-47;3!CL:0000791;2.31e-30;18!CL:0000789;2.31e-30;18!CL:0002419;2.31e-30;18!CL:0000624;2.58e-23;6!CL:0000084;7.71e-22;25!CL:0000625;2.39e-13;11!CL:0000542;2.77e-11;53!CL:0002393;5.09e-11;6!CL:0002397;5.09e-11;6!CL:0000815;7.21e-09;2!CL:0000792;7.21e-09;2!CL:0002677;7.21e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,6.47e-47,3;CL:0000825,6.47e-47,3;CL:0000791,1.93e-30,18;CL:0000789,1.93e-30,18;CL:0002420,1.93e-30,18;CL:0002419,1.93e-30,18;CL:0000790,1.93e-30,18;CL:0000624,1.97e-23,6;CL:0000838,3.39e-23,52;CL:0000542,9.57e-23,53;CL:0000051,9.57e-23,53;CL:0000084,6.79e-22,25;CL:0000827,6.79e-22,25;CL:0000738,5.07e-15,136;CL:0002087,5.44e-15,115;CL:0002031,2.49e-14,120;CL:0000625,2.39e-13,11;CL:0002032,1.56e-12,161;CL:0000837,1.56e-12,161;CL:0000037,5.74e-12,168;CL:0000988,2.64e-11,177;CL:0000815,6.42e-09,2;CL:0000792,6.42e-09,2;CL:0002677,6.42e-09,2;CL:0002393,1.29e-07,9;CL:0002397,1.29e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;2.31e-30;18!CL:0000051;2.77e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr10:8458599..8458612,+ | |||
}} | }} |
Latest revision as of 16:13, 23 July 2015
Short description: | p@chr10:8458599..8458612, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8458599..8458612, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 6.47e-47 | 3 |
pro-NK cell | 6.47e-47 | 3 |
mature alpha-beta T cell | 1.93e-30 | 18 |
alpha-beta T cell | 1.93e-30 | 18 |
immature T cell | 1.93e-30 | 18 |
mature T cell | 1.93e-30 | 18 |
immature alpha-beta T cell | 1.93e-30 | 18 |
CD4-positive, alpha-beta T cell | 1.97e-23 | 6 |
lymphoid lineage restricted progenitor cell | 3.39e-23 | 52 |
lymphocyte | 9.57e-23 | 53 |
common lymphoid progenitor | 9.57e-23 | 53 |
T cell | 6.79e-22 | 25 |
pro-T cell | 6.79e-22 | 25 |
leukocyte | 5.07e-15 | 136 |
nongranular leukocyte | 5.44e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.49e-14 | 120 |
CD8-positive, alpha-beta T cell | 2.39e-13 | 11 |
hematopoietic oligopotent progenitor cell | 1.56e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-12 | 161 |
hematopoietic stem cell | 5.74e-12 | 168 |
hematopoietic cell | 2.64e-11 | 177 |
regulatory T cell | 6.42e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.42e-09 | 2 |
naive regulatory T cell | 6.42e-09 | 2 |
intermediate monocyte | 1.29e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.29e-07 | 9 |