FFCP PHASE1:Hg19::chr12:46781329..46781343,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100288798 | |EntrezGene=100288798 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-184bp_to_BC014370_5end | |association_with_transcript=-184bp_to_BC014370_5end | ||
|cluster_id=chr12:46781329..46781343,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_1_at_LOC100288798_5end | |description=CAGE_peak_1_at_LOC100288798_5end | ||
|id=chr12:46781329..46781343,+ | |id=chr12:46781329..46781343,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.63e-21!180;CL:0000680!3.34e-13!57;CL:0000056!3.34e-13!57;CL:0000355!3.34e-13!57;CL:0000057!7.62e-13!75;CL:0000187!2.38e-11!54;CL:0000192!1.03e-10!42;CL:0000514!1.03e-10!42;CL:0000183!1.97e-09!59;CL:0000359!2.12e-09!32;CL:0000393!4.29e-09!60;CL:0000211!4.29e-09!60;CL:0000499!6.66e-09!27;CL:0000327!8.12e-08!14;CL:0002334!6.06e-07!12 | |ontology_enrichment_celltype=CL:0000055!2.63e-21!180;CL:0000680!3.34e-13!57;CL:0000056!3.34e-13!57;CL:0000355!3.34e-13!57;CL:0000057!7.62e-13!75;CL:0000187!2.38e-11!54;CL:0000192!1.03e-10!42;CL:0000514!1.03e-10!42;CL:0000183!1.97e-09!59;CL:0000359!2.12e-09!32;CL:0000393!4.29e-09!60;CL:0000211!4.29e-09!60;CL:0000499!6.66e-09!27;CL:0000327!8.12e-08!14;CL:0002334!6.06e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000306;1.81e-10;4!CL:0002547;1.81e-10;4!CL:0002334;2.21e-09;12!CL:0000153;5.53e-09;9!CL:0000447;5.53e-09;9!CL:0002615;7.04e-09;3!CL:0002579;1.63e-08;3!CL:0002580;9.57e-08;3!CL:0000499;1.28e-07;28!CL:0000515;1.81e-07;3!CL:0000135;3.26e-07;3!CL:0000388;3.26e-07;3!CL:0000136;6.21e-07;13!CL:0000197;7.41e-07;6!CL:0000098;7.41e-07;6!CL:0002167;7.41e-07;6!CL:0000327;8.28e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.78e-10,4;CL:0002547,1.78e-10,4;CL:0000136,5.02e-10,15;CL:0002334,2.18e-09,12;CL:0000057,4.37e-09,76;CL:0000153,6.02e-09,9;CL:0000447,6.02e-09,9;CL:0002615,7.52e-09,3;CL:0002579,1.37e-08,3;CL:0002580,1.09e-07,3;CL:0000499,1.31e-07,28;CL:0000135,3.58e-07,3;CL:0000388,3.58e-07,3;CL:0000197,6.56e-07,6;CL:0000098,6.56e-07,6;CL:0002167,6.56e-07,6;CL:0000327,8.03e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.07e-13!61;UBERON:0002036!1.07e-13!61;UBERON:0003082!1.07e-13!61;UBERON:0000914!2.40e-13!83;UBERON:0002329!2.40e-13!83;UBERON:0003077!2.40e-13!83;UBERON:0003059!2.40e-13!83;UBERON:0007282!2.40e-13!83;UBERON:0009618!2.40e-13!83;UBERON:0007285!2.40e-13!83;UBERON:0002385!7.97e-13!63;UBERON:0001015!7.97e-13!63;UBERON:0000383!7.97e-13!63;UBERON:0004290!1.14e-11!70;UBERON:0000486!2.64e-11!82;UBERON:0004573!9.96e-10!33;UBERON:0004571!9.96e-10!33;UBERON:0001637!2.71e-09!42;UBERON:0003509!2.71e-09!42;UBERON:0004572!2.71e-09!42;UBERON:0004457!8.47e-09!12;UBERON:0000042!8.47e-09!12;UBERON:0000475!3.87e-08!365;UBERON:0002100!5.67e-08!216;UBERON:0003688!1.54e-07!6;UBERON:0002358!1.54e-07!6;UBERON:0003684!1.54e-07!6;UBERON:0001178!1.54e-07!6;UBERON:0000310!1.69e-07!10 | |ontology_enrichment_uberon=UBERON:0001134!1.07e-13!61;UBERON:0002036!1.07e-13!61;UBERON:0003082!1.07e-13!61;UBERON:0000914!2.40e-13!83;UBERON:0002329!2.40e-13!83;UBERON:0003077!2.40e-13!83;UBERON:0003059!2.40e-13!83;UBERON:0007282!2.40e-13!83;UBERON:0009618!2.40e-13!83;UBERON:0007285!2.40e-13!83;UBERON:0002385!7.97e-13!63;UBERON:0001015!7.97e-13!63;UBERON:0000383!7.97e-13!63;UBERON:0004290!1.14e-11!70;UBERON:0000486!2.64e-11!82;UBERON:0004573!9.96e-10!33;UBERON:0004571!9.96e-10!33;UBERON:0001637!2.71e-09!42;UBERON:0003509!2.71e-09!42;UBERON:0004572!2.71e-09!42;UBERON:0004457!8.47e-09!12;UBERON:0000042!8.47e-09!12;UBERON:0000475!3.87e-08!365;UBERON:0002100!5.67e-08!216;UBERON:0003688!1.54e-07!6;UBERON:0002358!1.54e-07!6;UBERON:0003684!1.54e-07!6;UBERON:0001178!1.54e-07!6;UBERON:0000310!1.69e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.31e-17;9!UBERON:0000042;4.31e-17;9!UBERON:0003688;1.06e-15;6!UBERON:0002358;1.06e-15;6!UBERON:0003684;1.06e-15;6!UBERON:0001178;1.06e-15;6!UBERON:0000310;4.66e-11;10!UBERON:0004797;1.81e-10;4!UBERON:0000415;1.81e-10;4!UBERON:0007240;1.81e-10;4!UBERON:0005742;1.81e-10;4!UBERON:0005734;1.81e-10;4!UBERON:0004664;1.81e-10;4!UBERON:0004663;1.81e-10;4!UBERON:0001443;6.03e-10;11!UBERON:0007846;3.26e-07;3!UBERON:0000043;3.26e-07;3!UBERON:0007845;3.26e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.55e-16,6;UBERON:0002358,9.55e-16,6;UBERON:0003684,9.55e-16,6;UBERON:0001178,9.55e-16,6;UBERON:0004457,1.70e-12,12;UBERON:0000042,1.70e-12,12;UBERON:0000310,4.22e-11,10;UBERON:0000415,1.78e-10,4;UBERON:0007240,1.78e-10,4;UBERON:0005742,1.78e-10,4;UBERON:0005734,1.78e-10,4;UBERON:0004664,1.78e-10,4;UBERON:0004663,1.78e-10,4;UBERON:0001443,5.52e-10,11;UBERON:0004573,9.13e-08,33;UBERON:0004571,9.13e-08,33;UBERON:0007846,3.58e-07,3;UBERON:0000043,3.58e-07,3;UBERON:0007845,3.58e-07,3 | |||
|phase1_expression=12.717486548939,7.49351833618441,17.6193005119964,5.00366491765652,12.0679495495368,13.0850778615055,0,0,0.261185628199839,0,0,0,0,0.866364470720326,0.662794751455832,0,0,0.730310090387373,0,0,0.204000691244253,0.626909442956176,0,0,0,0.152826811495903,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42938867502708,2.1686349143074,1.00267582127178,3.62116297402059,0,0.486634870302636,0.378139268656271,0.886917589850256,1.31752178539689,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,3.92554586160197,4.50191214764944,6.88407889797153,2.12801029319014,1.12135520028461,0,0.98667019366864,2.17847724779836,1.48181739276657,0.980771418680752,0.302714855289863,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,0,0.494533858557114,0.910161361938026,0,0,0,0.554128230968366,0.438977620880838,0,0,1.13432183160021,0.179389635688862,0,0.423863802319124,0.300091096084402,0.309157587715317,0.257640540045629,0.37223371266318,0.675105328965065,1.16924406193438,0.757301322732344,0.0920498986422993,0,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0,0.828147600278907,0,0.482022059766964,0.661763836394364,0.217879444092406,0.237270619111097,0.674156540800822,0.196221465125346,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.821860859650752,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0.93733833986777,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.2933531432838,0.129271715757778,0,0,0,0,1.02882949704857,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0.599837947092342,0,0,0,1.4377491329495,1.14861935834114,0,2.89562613335158,2.05476322550383,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,1.00034104211935,0.542530047399471,1.66376689224646,6.60187258549499,4.1002627908823,5.85707074963566,6.01892199455438,0,22.7640756843511,0.664225598535437,0.921845842708516,0,0,0,0,0,0,0,0,0,5.95458738765064,1.07423381301644,2.52594084989766,12.9420540748258,8.18731598506726,2.73451665944133,11.8734453155993,0,0.355123450626254,0.246381468041427,0,0.348631135379878,0,0,0,0.459257792658427,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0,1.39646318328756,0.725083469571143,0.170453254832202,0.267096106940212,0.165284915360978,0,0.255225424989168,0,0.929691098594572,0.31481234683064,0,0,1.59691809095107,0.869932992075073,0.55597265731176,3.2918723950658,0,1.58189712359363,0.38126038784765,0.767693373934002,0.42793898803392,0.318203247925937,1.56989728039846,0.179872457583315,0.274537029736055,0.353437207037059,3.03273722359974,6.34041284692033,0.842516912477962,0,0.487426979262569,1.05650146756755,0,0.141405431953713,0,0.551365343546124,3.3171948762061,1.75380354101505,0.578775534266688,0.655894752046633,0.405820753925408,0.6196469961995,0.563391205064483,0,0.491245205065606,0,0,2.11107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0.622079175323615,0,0,0,0,0,2.22273980289274,0,0.0927680981618513,0,2.3438498497671,0.262379999988587,0,0,0.254253650292766,0,0,0,0,0,0,0,0.774054819518572,0,2.19385397153973,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,6.31228986788641,0,0,0,23.1262881440266,0,0,0,0,0.313932918407225,0,0.569219092059585,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0.219267951258557,0,0,87.4618215512768,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0,0,3.5597595271665,3.25799761052228,0,2.93928624098468,0,0,0.511164065356265,0.679872549120754,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43716206147409,0.310482014706917,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,2.08343305802598,0.50313580350515,0,0.457680136793847,0.907385542579434,0.15543720058278,0,0.318593534327405,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.214821114084977,0.464033759878494,0,0,2.40376993627955,3.36749488765919,0,0,0.214441591374926,0,0,0,1.71315693154527,0,0,1.53498834705095,1.23682402162117,0,2.53413660979609,0,0,0,0,0,0,0,0.327609848846413,0.737318726261158,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0.123935764259002,0,1.59002175326709,0,0,0.705351887381368,0,0.0642292250964595,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,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| ||
|short_description=p1@LOC100288798 | |short_description=p1@LOC100288798 | ||
}} | }} |
Latest revision as of 11:21, 18 September 2015
Short description: | p1@LOC100288798 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100288798_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -184bp_to_BC014370_5end |
EntrezGene: | LOC100288798 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.78e-10 | 4 |
fibroblast of the aortic adventitia | 1.78e-10 | 4 |
fat cell | 5.02e-10 | 15 |
preadipocyte | 2.18e-09 | 12 |
fibroblast | 4.37e-09 | 76 |
GAG secreting cell | 6.02e-09 | 9 |
carbohydrate secreting cell | 6.02e-09 | 9 |
adipocyte of omentum tissue | 7.52e-09 | 3 |
omentum preadipocyte | 1.37e-08 | 3 |
preadipocyte of the breast | 1.09e-07 | 3 |
stromal cell | 1.31e-07 | 28 |
fibrocyte | 3.58e-07 | 3 |
tendon cell | 3.58e-07 | 3 |
receptor cell | 6.56e-07 | 6 |
sensory epithelial cell | 6.56e-07 | 6 |
olfactory epithelial cell | 6.56e-07 | 6 |
extracellular matrix secreting cell | 8.03e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.55e-16 | 6 |
peritoneum | 9.55e-16 | 6 |
abdominal cavity | 9.55e-16 | 6 |
visceral peritoneum | 9.55e-16 | 6 |
cavity lining | 1.70e-12 | 12 |
serous membrane | 1.70e-12 | 12 |
breast | 4.22e-11 | 10 |
artery wall | 1.78e-10 | 4 |
tunica adventitia of artery | 1.78e-10 | 4 |
adventitia | 1.78e-10 | 4 |
tunica adventitia of blood vessel | 1.78e-10 | 4 |
aorta tunica adventitia | 1.78e-10 | 4 |
aorta wall | 1.78e-10 | 4 |
chest | 5.52e-10 | 11 |
systemic artery | 9.13e-08 | 33 |
systemic arterial system | 9.13e-08 | 33 |
dense regular connective tissue | 3.58e-07 | 3 |
tendon | 3.58e-07 | 3 |
regular connective tissue | 3.58e-07 | 3 |