FFCP PHASE1:Hg19::chr12:58287614..58287637,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=97bp_to_ENST00000548955_5end | |association_with_transcript=97bp_to_ENST00000548955_5end | ||
|cluster_id=chr12:58287614..58287637,- | |||
|coexpression_cluster_id=C181 | |||
|description=CAGE_peak_1_at_ENST00000548955_5end | |description=CAGE_peak_1_at_ENST00000548955_5end | ||
|id=chr12:58287614..58287637,- | |id=chr12:58287614..58287637,- | ||
|ontology_enrichment_celltype=CL:0000055!1.71e-09!180 | |ontology_enrichment_celltype=CL:0000055!1.71e-09!180 | ||
|ontology_enrichment_celltype_v019=CL:0002591;1.81e-40;1!CL:0002569;6.55e-08;6!CL:0002540;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.48e-40,1;CL:0002540,5.92e-08,6;CL:0002569,6.78e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;5.15e-21;2!UBERON:0002012;5.15e-21;2!UBERON:0008886;5.15e-21;2!UBERON:0003422;6.55e-08;6!UBERON:0003104;5.86e-07;7!UBERON:0009142;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,4.66e-21,2;UBERON:0007497,4.66e-21,2;UBERON:0003643,4.66e-21,2;UBERON:0003504,4.66e-21,2;UBERON:0003469,4.66e-21,2;UBERON:0003496,4.66e-21,2;UBERON:0002012,4.66e-21,2;UBERON:0008886,4.66e-21,2;UBERON:0007303,4.66e-21,2;UBERON:0002061,4.66e-21,2;UBERON:0005432,4.66e-21,2;UBERON:0004363,4.66e-21,2;UBERON:0004145,1.60e-14,3;UBERON:0003498,2.97e-09,5;UBERON:0005985,2.97e-09,5;UBERON:0010188,6.34e-08,6;UBERON:0002539,6.34e-08,6;UBERON:0003351,6.34e-08,6;UBERON:0008816,6.34e-08,6;UBERON:0003422,6.78e-08,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.662794751455832,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0.795285947051099,0.486634870302636,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485618833104395,0,0.816616685019573,0.245668634623536,0,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0.300091096084402,0.309157587715317,0,0,0.168776332241266,0.0974370051611986,0,0.276149695926898,0.80823028409406,0.710019185033229,0.201504196455281,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,1.08524321078289,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0.751941714077915,0.435050081742686,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0.975267478179181,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05562704063997,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,6.98590889320229,0.113312091520126,0,0,0,0.26446520348538,0,0,0,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0.37494122388632,0,0,0,0,0,0,0,0,0,0,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.500335809236594,0,0,0.173858272302579,0,0,0.17071847709395,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.397901550322736,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0.4226557275834,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426909383510862,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.662794751455832,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0.795285947051099,0.486634870302636,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485618833104395,0,0.816616685019573,0.245668634623536,0,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0.300091096084402,0.309157587715317,0,0,0.168776332241266,0.0974370051611986,0,0.276149695926898,0.80823028409406,0.710019185033229,0.201504196455281,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,1.08524321078289,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0.307007349452259,0.137836572484531,0.751941714077915,0.435050081742686,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0.975267478179181,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05562704063997,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,6.98590889320229,0.113312091520126,0,0,0,0.26446520348538,0,0,0,0,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0.37494122388632,0,0,0,0,0,0,0,0,0,0,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.500335809236594,0,0,0.173858272302579,0,0,0.17071847709395,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.397901550322736,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0.4226557275834,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426909383510862,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p1@ENST00000548955 | |short_description=p1@ENST00000548955 | ||
}} | }} |
Latest revision as of 10:59, 24 July 2015
Short description: | p1@ENST00000548955 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000548955_5end |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | 97bp_to_ENST00000548955_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.48e-40 | 1 |
mesenchymal stem cell of the bone marrow | 5.92e-08 | 6 |
mesenchymal stem cell of umbilical cord | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 4.66e-21 | 2 |
developing epithelial placode | 4.66e-21 | 2 |
respiratory system arterial blood vessel | 4.66e-21 | 2 |
respiratory system blood vessel | 4.66e-21 | 2 |
respiratory system artery | 4.66e-21 | 2 |
head blood vessel | 4.66e-21 | 2 |
pulmonary artery | 4.66e-21 | 2 |
pulmonary vascular system | 4.66e-21 | 2 |
pharyngeal vasculature | 4.66e-21 | 2 |
truncus arteriosus | 4.66e-21 | 2 |
aortic sac | 4.66e-21 | 2 |
pharyngeal arch artery | 4.66e-21 | 2 |
outflow tract | 1.60e-14 | 3 |
heart blood vessel | 2.97e-09 | 5 |
coronary vessel | 2.97e-09 | 5 |
protuberance | 6.34e-08 | 6 |
pharyngeal arch | 6.34e-08 | 6 |
pharyngeal epithelium | 6.34e-08 | 6 |
embryonic head | 6.34e-08 | 6 |
mesenchyme of umbilical cord | 6.78e-08 | 6 |