FFCP PHASE1:Hg19::chr18:9617195..9617198,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:9617195..9617198,- | |||
|coexpression_cluster_id=C362 | |||
|description=CAGE_peak_at_chr18:9617195..9617198,- | |description=CAGE_peak_at_chr18:9617195..9617198,- | ||
|id=chr18:9617195..9617198,- | |id=chr18:9617195..9617198,- | ||
|ontology_enrichment_celltype=CL:0002166!1.95e-07!3;CL:0002621!2.53e-07!3;CL:0000066!2.70e-07!254;CL:0002368!5.03e-07!13;CL:0002076!6.10e-07!43 | |ontology_enrichment_celltype=CL:0002166!1.95e-07!3;CL:0002621!2.53e-07!3;CL:0000066!2.70e-07!254;CL:0002368!5.03e-07!13;CL:0002076!6.10e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.15e-43;3!CL:0002621;7.00e-43;3!CL:0002336;2.38e-15;1!CL:0002261;2.38e-15;1!CL:0002170;2.38e-15;1!CL:0002251;1.34e-11;20!CL:0002159;6.94e-10;14!CL:0002076;3.58e-09;42!CL:0002535;2.48e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,9.28e-44,3;CL:0002621,6.07e-43,3;CL:0002336,2.06e-15,1;CL:0002261,2.06e-15,1;CL:0002170,2.06e-15,1;CL:0002251,1.26e-11,20;CL:0002159,6.63e-10,14;CL:0002076,1.81e-08,42;CL:0002535,2.48e-08,2;CL:0000066,3.57e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;1.06e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.01e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000075!2.99e-08!13;UBERON:0005944!2.99e-08!13;UBERON:0004288!2.99e-08!13;UBERON:0003089!2.99e-08!13;UBERON:0003129!5.59e-08!11;UBERON:0005910!2.23e-07!6;UBERON:0001949!2.53e-07!3;UBERON:0000165!4.20e-07!28;UBERON:0000930!4.20e-07!28;UBERON:0004119!8.24e-07!169;UBERON:0000925!8.24e-07!169;UBERON:0006595!8.24e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;7.00e-43;3!UBERON:0001708;5.86e-33;4!UBERON:0008895;5.86e-33;4!UBERON:0011159;1.59e-26;5!UBERON:0000486;3.31e-19;12!UBERON:0003929;8.04e-19;7!UBERON:0003729;1.13e-17;13!UBERON:0003350;1.49e-16;8!UBERON:0001828;1.49e-16;8!UBERON:0011137;2.01e-12;11!UBERON:0010323;2.01e-12;11!UBERON:0000344;1.34e-11;20!UBERON:0000075;1.02e-08;16!UBERON:0000165;2.33e-08;28!UBERON:0006955;2.48e-08;2!UBERON:0004801;2.48e-08;2!UBERON:0000161;2.65e-07;19!UBERON:0000166;2.65e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.07e-43,3;UBERON:0001708,4.98e-33,4;UBERON:0008895,4.98e-33,4;UBERON:0011159,1.40e-26,5;UBERON:0010188,2.83e-22,6;UBERON:0002539,2.83e-22,6;UBERON:0008816,2.83e-22,6;UBERON:0003729,1.04e-17,13;UBERON:0003350,1.41e-16,8;UBERON:0001828,1.41e-16,8;UBERON:0010323,1.90e-12,11;UBERON:0000033,5.33e-12,56;UBERON:0000344,1.26e-11,20;UBERON:0000153,8.65e-11,62;UBERON:0007811,8.65e-11,62;UBERON:0011137,6.63e-10,14;UBERON:0000075,9.81e-09,16;UBERON:0006955,2.48e-08,2;UBERON:0004801,2.48e-08,2;UBERON:0000165,4.28e-08,29;UBERON:0000930,4.28e-08,29;UBERON:0008814,8.03e-08,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0.670700859703636,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,1.52054421143703,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0.311211035399766,0,0.326923806226917,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0.500474079487857,0.277064115484183,0.438977620880838,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0.339121184620975,1.93260853163297,4.63668405004419,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.301586917234893,1.75918045801206,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,2.81201501960331,3.69560682037491,6.37987937590739,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.448524337381443,0,0.2933531432838,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.802025881213139,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.768760269460425,6.12541019974004,0,0,0.62962469366128,0,0.308033580176089,1.06461206063404,0,0,0.143124886741991,0,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0.43050537267123,0,0.443430153536676,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613612095012929,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0.392125068635479,0,0.569261198172555,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,1.65412492502765,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.734210113519403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0.590969204419841,0.333694205676207,0,0,0,0,0,0.47775168788705,0,0,0.116241425368125,0,0,0.414432328326074,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.336760265072938,0.358611026963382,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0.670700859703636,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,1.52054421143703,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0.311211035399766,0,0.326923806226917,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0.500474079487857,0.277064115484183,0.438977620880838,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0.339121184620975,1.93260853163297,4.63668405004419,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.301586917234893,1.75918045801206,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,2.81201501960331,3.69560682037491,6.37987937590739,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.448524337381443,0,0.2933531432838,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.802025881213139,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.768760269460425,6.12541019974004,0,0,0.62962469366128,0,0.308033580176089,1.06461206063404,0,0,0.143124886741991,0,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0.43050537267123,0,0.443430153536676,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613612095012929,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0.392125068635479,0,0.569261198172555,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,1.65412492502765,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.734210113519403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0.590969204419841,0.333694205676207,0,0,0,0,0,0.47775168788705,0,0,0.116241425368125,0,0,0.414432328326074,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.336760265072938,0.358611026963382,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:9617195..9617198,- | |short_description=p@chr18:9617195..9617198,- | ||
}} | }} |
Latest revision as of 22:21, 24 September 2015
Short description: | p@chr18:9617195..9617198, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:9617195..9617198, - |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 9.28e-44 | 3 |
gingival epithelial cell | 6.07e-43 | 3 |
buccal mucosa cell | 2.06e-15 | 1 |
endothelial cell of viscerocranial mucosa | 2.06e-15 | 1 |
keratinized cell of the oral mucosa | 2.06e-15 | 1 |
epithelial cell of alimentary canal | 1.26e-11 | 20 |
general ecto-epithelial cell | 6.63e-10 | 14 |
endo-epithelial cell | 1.81e-08 | 42 |
epithelial cell of cervix | 2.48e-08 | 2 |
epithelial cell | 3.57e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.07e-43 | 3 |
jaw skeleton | 4.98e-33 | 4 |
splanchnocranium | 4.98e-33 | 4 |
primary subdivision of cranial skeletal system | 1.40e-26 | 5 |
protuberance | 2.83e-22 | 6 |
pharyngeal arch | 2.83e-22 | 6 |
embryonic head | 2.83e-22 | 6 |
mouth mucosa | 1.04e-17 | 13 |
epithelium of mucosa | 1.41e-16 | 8 |
gingiva | 1.41e-16 | 8 |
cranial skeletal system | 1.90e-12 | 11 |
head | 5.33e-12 | 56 |
mucosa | 1.26e-11 | 20 |
anterior region of body | 8.65e-11 | 62 |
craniocervical region | 8.65e-11 | 62 |
axial skeletal system | 6.63e-10 | 14 |
subdivision of skeletal system | 9.81e-09 | 16 |
uterine epithelium | 2.48e-08 | 2 |
cervix epithelium | 2.48e-08 | 2 |
mouth | 4.28e-08 | 29 |
stomodeum | 4.28e-08 | 29 |
pharyngeal arch system | 8.03e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.01e-09 | 14 |