FFCP PHASE1:Hg19::chr19:1037975..1037992,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:1037975..1037992,+ | |||
|coexpression_cluster_id=C2473 | |||
|description=CAGE_peak_at_chr19:1037975..1037992,+ | |description=CAGE_peak_at_chr19:1037975..1037992,+ | ||
|id=chr19:1037975..1037992,+ | |id=chr19:1037975..1037992,+ | ||
|ontology_enrichment_celltype=CL:0000144!3.95e-31!625;CL:0002371!7.39e-31!591;CL:0000003!3.12e-26!722;CL:0000548!7.99e-26!679;CL:0000004!7.99e-26!679;CL:0000255!7.99e-26!679;CL:0000012!1.82e-25!682;CL:0000055!9.13e-19!180;CL:0000183!4.99e-14!59;CL:0000034!2.95e-13!444;CL:0000048!3.13e-13!430;CL:0000723!8.86e-13!436;CL:0000393!3.57e-12!60;CL:0000211!3.57e-12!60;CL:0000187!1.13e-11!54;CL:0000680!2.55e-11!57;CL:0000056!2.55e-11!57;CL:0000355!2.55e-11!57;CL:0000222!2.79e-10!119;CL:0000192!8.33e-10!42;CL:0000514!8.33e-10!42;CL:0002321!3.14e-09!248;CL:0000220!5.37e-09!246;CL:0000057!3.61e-08!75;CL:0000063!3.68e-08!578;CL:0000359!1.03e-07!32;CL:0002320!4.60e-07!365 | |ontology_enrichment_celltype=CL:0000144!3.95e-31!625;CL:0002371!7.39e-31!591;CL:0000003!3.12e-26!722;CL:0000548!7.99e-26!679;CL:0000004!7.99e-26!679;CL:0000255!7.99e-26!679;CL:0000012!1.82e-25!682;CL:0000055!9.13e-19!180;CL:0000183!4.99e-14!59;CL:0000034!2.95e-13!444;CL:0000048!3.13e-13!430;CL:0000723!8.86e-13!436;CL:0000393!3.57e-12!60;CL:0000211!3.57e-12!60;CL:0000187!1.13e-11!54;CL:0000680!2.55e-11!57;CL:0000056!2.55e-11!57;CL:0000355!2.55e-11!57;CL:0000222!2.79e-10!119;CL:0000192!8.33e-10!42;CL:0000514!8.33e-10!42;CL:0002321!3.14e-09!248;CL:0000220!5.37e-09!246;CL:0000057!3.61e-08!75;CL:0000063!3.68e-08!578;CL:0000359!1.03e-07!32;CL:0002320!4.60e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.51e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,3.75e-12,441;CL:0000048,3.90e-12,427;CL:0000393,4.95e-12,61;CL:0000211,4.95e-12,61;CL:0000723,9.19e-12,433;CL:0000187,1.21e-11,55;CL:0000680,3.47e-11,58;CL:0000056,3.47e-11,58;CL:0000355,3.47e-11,58;CL:0000222,1.21e-10,121;CL:0000192,1.01e-09,43;CL:0000514,1.01e-09,43;CL:0002321,1.04e-09,250;CL:0000057,1.58e-08,76;CL:0000359,1.16e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.37e-12!110;UBERON:0001009!3.10e-11!113;UBERON:0000486!1.74e-10!82;UBERON:0002049!1.28e-09!79;UBERON:0007798!1.28e-09!79;UBERON:0000914!1.85e-09!83;UBERON:0002329!1.85e-09!83;UBERON:0003077!1.85e-09!83;UBERON:0003059!1.85e-09!83;UBERON:0007282!1.85e-09!83;UBERON:0009618!1.85e-09!83;UBERON:0007285!1.85e-09!83;UBERON:0001134!4.75e-09!61;UBERON:0002036!4.75e-09!61;UBERON:0003082!4.75e-09!61;UBERON:0004290!6.97e-09!70;UBERON:0002385!2.56e-08!63;UBERON:0001015!2.56e-08!63;UBERON:0000383!2.56e-08!63;UBERON:0001981!1.57e-07!60;UBERON:0007500!1.57e-07!60;UBERON:0004537!1.57e-07!60;UBERON:0006965!1.57e-07!60;UBERON:0005256!1.75e-07!143;UBERON:0004872!8.72e-07!84;UBERON:0000055!9.68e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.47e-11,109;UBERON:0007503,5.51e-11,78;UBERON:0001009,1.81e-10,112;UBERON:0000486,1.88e-10,83;UBERON:0002049,4.44e-09,78;UBERON:0007798,4.44e-09,78;UBERON:0001134,7.39e-09,62;UBERON:0002036,7.39e-09,62;UBERON:0003082,7.39e-09,62;UBERON:0002329,8.05e-09,71;UBERON:0003059,8.05e-09,71;UBERON:0007282,8.05e-09,71;UBERON:0004290,8.05e-09,71;UBERON:0009618,8.05e-09,71;UBERON:0007524,1.40e-08,73;UBERON:0003077,2.39e-08,72;UBERON:0007285,2.39e-08,72;UBERON:0002385,4.55e-08,64;UBERON:0001015,4.55e-08,64;UBERON:0000383,4.55e-08,64;UBERON:0007500,7.20e-07,59;UBERON:0001981,7.20e-07,59;UBERON:0004537,7.20e-07,59;UBERON:0006965,7.20e-07,59 | |||
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| ||
|short_description=p@chr19:1037975..1037992,+ | |short_description=p@chr19:1037975..1037992,+ | ||
}} | }} |
Latest revision as of 02:54, 26 July 2015
Short description: | p@chr19:1037975..1037992, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1037975..1037992, + |
Coexpression cluster: | C2473_Hair_Alveolar_Aortic_Astrocyte_Mesenchymal_Neutrophils_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 3.75e-12 | 441 |
multi fate stem cell | 3.90e-12 | 427 |
electrically responsive cell | 4.95e-12 | 61 |
electrically active cell | 4.95e-12 | 61 |
somatic stem cell | 9.19e-12 | 433 |
muscle cell | 1.21e-11 | 55 |
muscle precursor cell | 3.47e-11 | 58 |
myoblast | 3.47e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.47e-11 | 58 |
mesodermal cell | 1.21e-10 | 121 |
smooth muscle cell | 1.01e-09 | 43 |
smooth muscle myoblast | 1.01e-09 | 43 |
embryonic cell | 1.04e-09 | 250 |
fibroblast | 1.58e-08 | 76 |
vascular associated smooth muscle cell | 1.16e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.47e-11 | 109 |
epithelial vesicle | 5.51e-11 | 78 |
circulatory system | 1.81e-10 | 112 |
multilaminar epithelium | 1.88e-10 | 83 |
vasculature | 4.44e-09 | 78 |
vascular system | 4.44e-09 | 78 |
skeletal muscle tissue | 7.39e-09 | 62 |
striated muscle tissue | 7.39e-09 | 62 |
myotome | 7.39e-09 | 62 |
somite | 8.05e-09 | 71 |
presomitic mesoderm | 8.05e-09 | 71 |
presumptive segmental plate | 8.05e-09 | 71 |
dermomyotome | 8.05e-09 | 71 |
trunk paraxial mesoderm | 8.05e-09 | 71 |
dense mesenchyme tissue | 1.40e-08 | 73 |
paraxial mesoderm | 2.39e-08 | 72 |
presumptive paraxial mesoderm | 2.39e-08 | 72 |
muscle tissue | 4.55e-08 | 64 |
musculature | 4.55e-08 | 64 |
musculature of body | 4.55e-08 | 64 |
epithelial tube open at both ends | 7.20e-07 | 59 |
blood vessel | 7.20e-07 | 59 |
blood vasculature | 7.20e-07 | 59 |
vascular cord | 7.20e-07 | 59 |