FFCP PHASE1:Hg19::chr11:12211354..12211375,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:12211354..12211375,+
|short_description=p@chr11:12211354..12211375,+
|description=CAGE_peak_at_chr11:12211354..12211375,+
|association_with_transcript=NA
...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:12211354..12211375,+ | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr11:12211354..12211375,+ | |||
|id=chr11:12211354..12211375,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.12e-21!43;CL:0000066!1.69e-17!254;CL:0002368!8.64e-17!13;CL:0000223!1.20e-15!59;CL:0000076!1.37e-15!62;CL:0002159!1.36e-12!13;CL:0002251!3.53e-10!21;CL:0002202!1.98e-09!9;CL:0002632!1.98e-09!9;CL:0000220!2.82e-09!246;CL:0000244!3.15e-09!4;CL:0000731!3.15e-09!4;CL:0002321!4.17e-09!248;CL:0000240!5.16e-09!6;CL:0000311!5.16e-09!6;CL:0000079!5.16e-09!6;CL:0000237!5.16e-09!6;CL:0000036!5.16e-09!6;CL:0000357!5.16e-09!6;CL:0000114!5.16e-09!6;CL:0000068!3.67e-08!3;CL:0000069!3.67e-08!3;CL:0000307!3.67e-08!3;CL:0000377!3.67e-08!3;CL:0002328!3.94e-08!3;CL:0002621!1.59e-07!3;CL:0000312!1.64e-07!5;CL:0002166!3.02e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002327;4.16e-21;4!CL:0000307;6.55e-13;3!CL:0002368;1.76e-11;13!CL:0002202;1.21e-09;9!CL:0002632;1.21e-09;9!CL:0002076;2.95e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,4.03e-21,4;CL:0000068,7.86e-13,3;CL:0000069,7.86e-13,3;CL:0000307,7.86e-13,3;CL:0000377,7.86e-13,3;CL:0002368,1.88e-11,13;CL:0002076,7.46e-10,42;CL:0002202,1.33e-09,9;CL:0002632,1.33e-09,9;CL:0000223,5.07e-09,58;CL:0000066,9.44e-09,253 | |||
|ontology_enrichment_development_v019=CL:0000377;6.55e-13;3!CL:0000223;5.95e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!4.15e-21!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.03e-10;14!DOID:0060060;2.62e-10;1!DOID:0060061;2.62e-10;1!DOID:8691;2.62e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.08e-11,14;DOID:0060060,1.43e-10,1;DOID:0060061,1.43e-10,1;DOID:8691,1.43e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000365!5.41e-11!5;UBERON:0003729!1.94e-10!5;UBERON:0001004!1.99e-09!72;UBERON:0005910!4.32e-09!6;UBERON:0003343!6.16e-09!4;UBERON:0004785!6.16e-09!4;UBERON:0004815!3.94e-08!3;UBERON:0002031!3.94e-08!3;UBERON:0001949!1.59e-07!3;UBERON:0000161!1.65e-07!35;UBERON:0007196!1.79e-07!14;UBERON:0001558!1.79e-07!14;UBERON:0000166!6.49e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;4.16e-21;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,4.03e-21,4;UBERON:0005333,4.03e-21,4;UBERON:0008425,4.03e-21,4;UBERON:0005311,4.03e-21,4;UBERON:0000076,7.44e-11,8;UBERON:0001004,7.75e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0.919421224478927,0.90361775633475,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.334231370655521,0,0,0,1.0247305578054,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,1.13061588384802,0.419499436209906,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.63647672354501,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,3.37205259772859,0.804231779293047,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.425325291727159,4.47792613514241,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.644566922551274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.384380134730212,3.70076866234294,0.708104465988849,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,1.34060455107157,1.08890984861323,0,0.43050537267123,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.682760689712998,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15129580152871,0.988511511572023,1.04421949505455,0.134802265961354,0,0,0,2.93496928398135,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0.881931576729399,2.96001302373369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.624902039810533,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,1.9998739585493,0,0,0,0,0.979156554036111,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.11796972334774,0.183428598521679,1.27078232765372,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0.703484977438482,0.255524855279191,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,1.19502933965765,0,0,0.709992004383392,0.426067023795788,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,92.1055615177956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0.407016343054873,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0.919421224478927,0.90361775633475,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.334231370655521,0,0,0,1.0247305578054,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,1.13061588384802,0.419499436209906,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.63647672354501,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,3.37205259772859,0.804231779293047,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.425325291727159,4.47792613514241,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.644566922551274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.384380134730212,3.70076866234294,0.708104465988849,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,1.34060455107157,1.08890984861323,0,0.43050537267123,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.682760689712998,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15129580152871,0.988511511572023,1.04421949505455,0.134802265961354,0,0,0,2.93496928398135,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0.881931576729399,2.96001302373369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.624902039810533,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,1.9998739585493,0,0,0,0,0.979156554036111,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.11796972334774,0.183428598521679,1.27078232765372,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0.703484977438482,0.255524855279191,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,1.19502933965765,0,0,0.709992004383392,0.426067023795788,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,92.1055615177956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0.407016343054873,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:12211354..12211375,+ | |||
}} | }} |
Latest revision as of 19:18, 23 July 2015
Short description: | p@chr11:12211354..12211375, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:12211354..12211375, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 4.03e-21 | 4 |
duct epithelial cell | 7.86e-13 | 3 |
branched duct epithelial cell | 7.86e-13 | 3 |
tracheal epithelial cell | 7.86e-13 | 3 |
tracheoblast | 7.86e-13 | 3 |
respiratory epithelial cell | 1.88e-11 | 13 |
endo-epithelial cell | 7.46e-10 | 42 |
epithelial cell of tracheobronchial tree | 1.33e-09 | 9 |
epithelial cell of lower respiratory tract | 1.33e-09 | 9 |
endodermal cell | 5.07e-09 | 58 |
epithelial cell | 9.44e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 4.03e-21 | 4 |
mammary bud | 4.03e-21 | 4 |
mammary ridge | 4.03e-21 | 4 |
mammary placode | 4.03e-21 | 4 |
external ectoderm | 7.44e-11 | 8 |
respiratory system | 7.75e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.08e-11 | 14 |
non-Hodgkin lymphoma | 1.43e-10 | 1 |
cutaneous T cell lymphoma | 1.43e-10 | 1 |
mycosis fungoides | 1.43e-10 | 1 |