FFCP PHASE1:Hg19::chr14:31028348..31028392,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55632 | |EntrezGene=55632 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20338 | |HGNC=20338 | ||
|TSSclassifier=strong | |||
|UniProt=F5GX24,F8VQY7,F8VY49 | |UniProt=F5GX24,F8VQY7,F8VY49 | ||
|association_with_transcript=0bp_to_ENST00000438909,ENST00000544007,ENST00000547209,ENST00000550944,ENST00000552488_5end | |association_with_transcript=0bp_to_ENST00000438909,ENST00000544007,ENST00000547209,ENST00000550944,ENST00000552488_5end | ||
|cluster_id=chr14:31028348..31028392,+ | |||
|description=CAGE_peak_1_at_G2E3_5end | |description=CAGE_peak_1_at_G2E3_5end | ||
|id=chr14:31028348..31028392,+ | |id=chr14:31028348..31028392,+ | ||
|ontology_enrichment_celltype=CL:0000542!3.17e-13!53;CL:0000051!3.17e-13!53;CL:0000838!9.69e-13!52;CL:0000037!4.91e-10!172;CL:0000566!4.91e-10!172;CL:0002032!3.10e-09!165;CL:0000837!3.10e-09!165;CL:0000084!1.49e-08!25;CL:0000827!1.49e-08!25;CL:0000738!1.58e-08!140;CL:0000988!1.66e-08!182;CL:0002031!2.16e-08!124;CL:0000791!4.00e-08!18;CL:0000789!4.00e-08!18;CL:0002420!4.00e-08!18;CL:0002419!4.00e-08!18;CL:0000790!4.00e-08!18;CL:0002087!2.07e-07!119 | |ontology_enrichment_celltype=CL:0000542!3.17e-13!53;CL:0000051!3.17e-13!53;CL:0000838!9.69e-13!52;CL:0000037!4.91e-10!172;CL:0000566!4.91e-10!172;CL:0002032!3.10e-09!165;CL:0000837!3.10e-09!165;CL:0000084!1.49e-08!25;CL:0000827!1.49e-08!25;CL:0000738!1.58e-08!140;CL:0000988!1.66e-08!182;CL:0002031!2.16e-08!124;CL:0000791!4.00e-08!18;CL:0000789!4.00e-08!18;CL:0002420!4.00e-08!18;CL:0002419!4.00e-08!18;CL:0000790!4.00e-08!18;CL:0002087!2.07e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.56e-08;53!CL:0000084;1.98e-08;25!CL:0000791;5.19e-08;18!CL:0000789;5.19e-08;18!CL:0002419;5.19e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.15e-13,53;CL:0000051,3.15e-13,53;CL:0000838,9.63e-13,52;CL:0000037,1.12e-09,168;CL:0002032,6.89e-09,161;CL:0000837,6.89e-09,161;CL:0000084,1.49e-08,25;CL:0000827,1.49e-08,25;CL:0000988,1.69e-08,177;CL:0000738,3.46e-08,136;CL:0000791,4.00e-08,18;CL:0000789,4.00e-08,18;CL:0002420,4.00e-08,18;CL:0002419,4.00e-08,18;CL:0000790,4.00e-08,18;CL:0002031,4.70e-08,120;CL:0002087,4.39e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.56e-08;53!CL:0000790;5.19e-08;18 | |||
|ontology_enrichment_disease=DOID:162!4.83e-11!235;DOID:14566!4.03e-10!239;DOID:0050687!2.58e-09!143;DOID:305!7.00e-08!106 | |ontology_enrichment_disease=DOID:162!4.83e-11!235;DOID:14566!4.03e-10!239;DOID:0050687!2.58e-09!143;DOID:305!7.00e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.81e-11,235;DOID:14566,4.00e-10,239;DOID:0050687,2.58e-09,143;DOID:305,7.00e-08,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@G2E3 | |short_description=p1@G2E3 | ||
}} | }} |
Latest revision as of 16:43, 19 September 2015
Short description: | p1@G2E3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_G2E3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000438909, ENST00000544007, ENST00000547209, ENST00000550944, ENST00000552488_5end |
EntrezGene: | G2E3 |
HGNC: | 20338 |
UniProt: | F5GX24F8VQY7F8VY49 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.15e-13 | 53 |
common lymphoid progenitor | 3.15e-13 | 53 |
lymphoid lineage restricted progenitor cell | 9.63e-13 | 52 |
hematopoietic stem cell | 1.12e-09 | 168 |
hematopoietic oligopotent progenitor cell | 6.89e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.89e-09 | 161 |
T cell | 1.49e-08 | 25 |
pro-T cell | 1.49e-08 | 25 |
hematopoietic cell | 1.69e-08 | 177 |
leukocyte | 3.46e-08 | 136 |
mature alpha-beta T cell | 4.00e-08 | 18 |
alpha-beta T cell | 4.00e-08 | 18 |
immature T cell | 4.00e-08 | 18 |
mature T cell | 4.00e-08 | 18 |
immature alpha-beta T cell | 4.00e-08 | 18 |
hematopoietic lineage restricted progenitor cell | 4.70e-08 | 120 |
nongranular leukocyte | 4.39e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.81e-11 | 235 |
disease of cellular proliferation | 4.00e-10 | 239 |
cell type cancer | 2.58e-09 | 143 |
carcinoma | 7.00e-08 | 106 |