FFCP PHASE1:Hg19::chr11:2292201..2292212,-: Difference between revisions
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|id=chr11:2292201..2292212,-
|short_description=p3@ASCL2
|description=CAGE_peak_3_at_ASCL2_5end
|association_with_transcript=-19bp_to_ENST00000331289,NM_005170,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=430 | |EntrezGene=430 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=739 | |HGNC=739 | ||
|TSSclassifier=strong | |||
|UniProt=Q99929 | |UniProt=Q99929 | ||
|association_with_transcript=-19bp_to_ENST00000331289,NM_005170,uc001lvu.2_5end | |||
|cluster_id=chr11:2292201..2292212,- | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_3_at_ASCL2_5end | |||
|id=chr11:2292201..2292212,- | |||
|ontology_enrichment_celltype=CL:0002057!3.75e-12!42;CL:0000860!6.07e-11!45;CL:0002009!5.15e-10!65;CL:0002194!1.72e-09!63;CL:0000576!1.72e-09!63;CL:0000040!1.72e-09!63;CL:0000559!1.72e-09!63;CL:0002393!1.19e-08!9;CL:0002397!1.19e-08!9;CL:0000557!1.34e-08!71;CL:0002087!5.00e-08!119;CL:0000839!6.62e-08!70;CL:0000738!1.11e-07!140;CL:0000766!1.78e-07!76;CL:0002031!2.43e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.17e-16;3!CL:0002535;6.07e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.18e-16,3;CL:0002535,6.42e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.25e-12;1!UBERON:0007297;6.07e-07;2 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.25e-12;1!DOID:3149;1.25e-12;1!DOID:4362;7.94e-10;5!DOID:3451;6.07e-07;2!DOID:4159;6.07e-07;2!DOID:0060122;6.07e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.57e-12,1;DOID:3149,1.57e-12,1;DOID:4362,7.77e-10,5;DOID:3451,6.80e-07,2;DOID:4159,6.80e-07,2;DOID:0060122,6.80e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.91e-10!102;UBERON:0003061!6.91e-10!102;UBERON:0002193!7.44e-09!112;UBERON:0002371!6.55e-07!80;UBERON:0007023!7.65e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.17e-16;3!UBERON:0000920;3.17e-16;3!UBERON:0000998;1.25e-12;1!UBERON:0006868;1.25e-12;1!UBERON:0005631;7.82e-11;10!UBERON:0000158;7.82e-11;10!UBERON:0000002;2.47e-08;6!UBERON:0001560;2.47e-08;6!UBERON:0006955;6.07e-07;2!UBERON:0004801;6.07e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.18e-16,3;UBERON:0000998,1.11e-12,1;UBERON:0006868,1.11e-12,1;UBERON:0000002,2.43e-08,6;UBERON:0001560,2.43e-08,6;UBERON:0005631,6.67e-08,14;UBERON:0000158,6.67e-08,14;UBERON:0003124,1.84e-07,7;UBERON:0006955,6.42e-07,2;UBERON:0004801,6.42e-07,2 | |||
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| ||
|short_description=p3@ASCL2 | |||
}} | }} |
Latest revision as of 10:02, 17 September 2015
Short description: | p3@ASCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ASCL2_5end |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | -19bp_to_ENST00000331289, NM_005170, uc001lvu.2_5end |
EntrezGene: | ASCL2 |
HGNC: | 739 |
UniProt: | Q99929 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.18e-16 | 3 |
epithelial cell of cervix | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.18e-16 | 3 |
seminal vesicle | 1.11e-12 | 1 |
seminal fluid secreting gland | 1.11e-12 | 1 |
uterine cervix | 2.43e-08 | 6 |
neck of organ | 2.43e-08 | 6 |
extraembryonic membrane | 6.67e-08 | 14 |
membranous layer | 6.67e-08 | 14 |
chorion | 1.84e-07 | 7 |
uterine epithelium | 6.42e-07 | 2 |
cervix epithelium | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.57e-12 | 1 |
keratoacanthoma | 1.57e-12 | 1 |
cervical cancer | 7.77e-10 | 5 |
skin carcinoma | 6.80e-07 | 2 |
skin cancer | 6.80e-07 | 2 |
integumentary system cancer | 6.80e-07 | 2 |