FFCP PHASE1:Hg19::chr11:314052..314073,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:314052..314073,+
|short_description=p1@IFITM1
|description=CAGE_peak_1_at_IFITM1_5end
|association_with_transcript=11bp_to_ENST00000452428_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8519 | |EntrezGene=8519 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5412 | |HGNC=5412 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000452428_5end | |||
|cluster_id=chr11:314052..314073,+ | |||
|coexpression_cluster_id=C3139 | |||
|description=CAGE_peak_1_at_IFITM1_5end | |||
|id=chr11:314052..314073,+ | |||
|ontology_enrichment_celltype=CL:0000084!8.44e-12!25;CL:0000827!8.44e-12!25;CL:0000791!2.51e-11!18;CL:0000789!2.51e-11!18;CL:0002420!2.51e-11!18;CL:0002419!2.51e-11!18;CL:0000790!2.51e-11!18;CL:0000838!4.37e-10!52;CL:0000542!5.33e-10!53;CL:0000051!5.33e-10!53;CL:0000625!1.83e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;8.12e-12;25!CL:0000791;2.45e-11;18!CL:0000789;2.45e-11;18!CL:0002419;2.45e-11;18!CL:0000625;1.80e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,8.25e-12,25;CL:0000827,8.25e-12,25;CL:0000791,2.46e-11,18;CL:0000789,2.46e-11,18;CL:0002420,2.46e-11,18;CL:0002419,2.46e-11,18;CL:0000790,2.46e-11,18;CL:0000838,4.24e-10,52;CL:0000542,5.18e-10,53;CL:0000051,5.18e-10,53;CL:0000625,1.80e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.45e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.09e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.26e-09,114 | |||
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| ||
|short_description=p1@IFITM1 | |||
}} | }} |
Latest revision as of 14:28, 17 September 2015
Short description: | p1@IFITM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IFITM1_5end |
Coexpression cluster: | C3139_myeloma_gall_Smooth_mesenchymal_Fibroblast_mesothelioma_meningioma |
Association with transcript: | 11bp_to_ENST00000452428_5end |
EntrezGene: | IFITM1 |
HGNC: | 5412 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 8.25e-12 | 25 |
pro-T cell | 8.25e-12 | 25 |
mature alpha-beta T cell | 2.46e-11 | 18 |
alpha-beta T cell | 2.46e-11 | 18 |
immature T cell | 2.46e-11 | 18 |
mature T cell | 2.46e-11 | 18 |
immature alpha-beta T cell | 2.46e-11 | 18 |
lymphoid lineage restricted progenitor cell | 4.24e-10 | 52 |
lymphocyte | 5.18e-10 | 53 |
common lymphoid progenitor | 5.18e-10 | 53 |
CD8-positive, alpha-beta T cell | 1.80e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.26e-09 | 114 |