FFCP PHASE1:Hg19::chr15:29211622..29211634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=321 | |EntrezGene=321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=579 | |HGNC=579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_ENST00000558804_5end | |association_with_transcript=52bp_to_ENST00000558804_5end | ||
|cluster_id=chr15:29211622..29211634,+ | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_9_at_APBA2_5end | |description=CAGE_peak_9_at_APBA2_5end | ||
|id=chr15:29211622..29211634,+ | |id=chr15:29211622..29211634,+ | ||
|ontology_enrichment_celltype=CL:0000791!5.68e-25!18;CL:0000789!5.68e-25!18;CL:0002420!5.68e-25!18;CL:0002419!5.68e-25!18;CL:0000790!5.68e-25!18;CL:0000084!1.03e-23!25;CL:0000827!1.03e-23!25;CL:0000625!1.42e-17!11;CL:0000838!2.10e-13!52;CL:0000542!5.07e-13!53;CL:0000051!5.07e-13!53;CL:0000624!1.73e-07!6;CL:0000037!2.22e-07!172;CL:0000566!2.22e-07!172;CL:0002087!3.49e-07!119;CL:0000623!4.46e-07!3;CL:0000825!4.46e-07!3;CL:0000842!8.36e-07!3 | |ontology_enrichment_celltype=CL:0000791!5.68e-25!18;CL:0000789!5.68e-25!18;CL:0002420!5.68e-25!18;CL:0002419!5.68e-25!18;CL:0000790!5.68e-25!18;CL:0000084!1.03e-23!25;CL:0000827!1.03e-23!25;CL:0000625!1.42e-17!11;CL:0000838!2.10e-13!52;CL:0000542!5.07e-13!53;CL:0000051!5.07e-13!53;CL:0000624!1.73e-07!6;CL:0000037!2.22e-07!172;CL:0000566!2.22e-07!172;CL:0002087!3.49e-07!119;CL:0000623!4.46e-07!3;CL:0000825!4.46e-07!3;CL:0000842!8.36e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.29e-44;11!CL:0000791;6.10e-38;18!CL:0000789;6.10e-38;18!CL:0002419;6.10e-38;18!CL:0000084;3.22e-36;25!CL:0000623;3.82e-16;3!CL:0000226;2.68e-15;3!CL:0000842;2.68e-15;3!CL:0000542;3.25e-13;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,8.59e-45,11;CL:0000791,4.33e-38,18;CL:0000789,4.33e-38,18;CL:0002420,4.33e-38,18;CL:0002419,4.33e-38,18;CL:0000790,4.33e-38,18;CL:0000084,2.90e-36,25;CL:0000827,2.90e-36,25;CL:0000838,4.19e-24,52;CL:0000542,1.42e-23,53;CL:0000051,1.42e-23,53;CL:0000623,3.82e-16,3;CL:0000825,3.82e-16,3;CL:0000226,2.00e-15,3;CL:0000842,2.00e-15,3;CL:0002087,3.58e-14,115;CL:0000037,7.81e-13,168;CL:0000738,1.17e-12,136;CL:0000988,6.64e-12,177;CL:0002032,5.97e-10,161;CL:0000837,5.97e-10,161;CL:0002031,2.43e-09,120 | |||
|ontology_enrichment_development_v019=CL:0000790;6.10e-38;18!CL:0000051;3.25e-13;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.73e-17!15;UBERON:0000179!8.73e-17!15;UBERON:0000463!8.73e-17!15;UBERON:0007023!1.44e-15!115;UBERON:0004177!4.64e-08!7;UBERON:0002370!5.30e-07!4;UBERON:0005058!5.30e-07!4;UBERON:0009113!5.30e-07!4;UBERON:0003295!5.30e-07!4;UBERON:0005562!5.30e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.07e-37;15!UBERON:0000179;3.07e-37;15!UBERON:0000463;3.07e-37;15!UBERON:0002390;2.22e-15;32!UBERON:0002193;5.53e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.37e-37,15;UBERON:0000179,3.37e-37,15;UBERON:0000463,3.37e-37,15 | |||
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| ||
|short_description=p9@APBA2 | |short_description=p9@APBA2 | ||
}} | }} |
Latest revision as of 02:20, 17 September 2015
Short description: | p9@APBA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_APBA2_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 52bp_to_ENST00000558804_5end |
EntrezGene: | APBA2 |
HGNC: | 579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 8.59e-45 | 11 |
mature alpha-beta T cell | 4.33e-38 | 18 |
alpha-beta T cell | 4.33e-38 | 18 |
immature T cell | 4.33e-38 | 18 |
mature T cell | 4.33e-38 | 18 |
immature alpha-beta T cell | 4.33e-38 | 18 |
T cell | 2.90e-36 | 25 |
pro-T cell | 2.90e-36 | 25 |
lymphoid lineage restricted progenitor cell | 4.19e-24 | 52 |
lymphocyte | 1.42e-23 | 53 |
common lymphoid progenitor | 1.42e-23 | 53 |
natural killer cell | 3.82e-16 | 3 |
pro-NK cell | 3.82e-16 | 3 |
single nucleate cell | 2.00e-15 | 3 |
mononuclear cell | 2.00e-15 | 3 |
nongranular leukocyte | 3.58e-14 | 115 |
hematopoietic stem cell | 7.81e-13 | 168 |
leukocyte | 1.17e-12 | 136 |
hematopoietic cell | 6.64e-12 | 177 |
hematopoietic oligopotent progenitor cell | 5.97e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.97e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 2.43e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 3.37e-37 | 15 |
haemolymphatic fluid | 3.37e-37 | 15 |
organism substance | 3.37e-37 | 15 |