FFCP PHASE1:Hg19::chr1:156785292..156785301,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9047 | |EntrezGene=9047 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10821 | |HGNC=10821 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-89bp_to_ENST00000486350_5end | |association_with_transcript=-89bp_to_ENST00000486350_5end | ||
|cluster_id=chr1:156785292..156785301,- | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_13_at_SH2D2A_5end | |description=CAGE_peak_13_at_SH2D2A_5end | ||
|id=chr1:156785292..156785301,- | |id=chr1:156785292..156785301,- | ||
|ontology_enrichment_celltype=CL:0002368!2.86e-09!13;CL:0000623!1.64e-07!3;CL:0000825!1.64e-07!3 | |ontology_enrichment_celltype=CL:0002368!2.86e-09!13;CL:0000623!1.64e-07!3;CL:0000825!1.64e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!5.81e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:4556;6.76e-18;3!DOID:3908;2.66e-11;5!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,6.76e-18,3;DOID:3908,2.66e-11,5;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.03e-11!2;UBERON:0002757!1.03e-11!2;UBERON:0010134!1.03e-11!2;UBERON:0002784!1.03e-11!2;UBERON:0005408!1.03e-11!2;UBERON:0001899!1.03e-11!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.99e-98;2!UBERON:0002757;1.99e-98;2!UBERON:0010134;1.99e-98;2!UBERON:0005408;1.99e-98;2!UBERON:0001899;1.99e-98;2!UBERON:0003296;5.82e-50;4!UBERON:0010133;5.82e-50;4!UBERON:0002784;5.82e-50;4!UBERON:0001894;3.92e-29;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.56e-98,2;UBERON:0002757,2.56e-98,2;UBERON:0010134,2.56e-98,2;UBERON:0005408,2.56e-98,2;UBERON:0001899,2.56e-98,2;UBERON:0003296,6.60e-50,4;UBERON:0010133,6.60e-50,4;UBERON:0002784,6.60e-50,4;UBERON:0001894,4.21e-29,7;UBERON:0006222,4.21e-29,7 | |||
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|short_description=p13@SH2D2A | |short_description=p13@SH2D2A | ||
}} | }} |
Latest revision as of 18:23, 17 September 2015
Short description: | p13@SH2D2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SH2D2A_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | -89bp_to_ENST00000486350_5end |
EntrezGene: | SH2D2A |
HGNC: | 10821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.56e-98 | 2 |
regional part of epithalamus | 2.56e-98 | 2 |
secretory circumventricular organ | 2.56e-98 | 2 |
circumventricular organ | 2.56e-98 | 2 |
epithalamus | 2.56e-98 | 2 |
gland of diencephalon | 6.60e-50 | 4 |
neuroendocrine gland | 6.60e-50 | 4 |
regional part of diencephalon | 6.60e-50 | 4 |
diencephalon | 4.21e-29 | 7 |
future diencephalon | 4.21e-29 | 7 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 6.76e-18 | 3 |
non-small cell lung carcinoma | 2.66e-11 | 5 |
lung carcinoma | 7.48e-07 | 9 |