FFCP PHASE1:Hg19::chr1:203734321..203734330,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54900 | |EntrezGene=54900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26005 | |HGNC=26005 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWV1 | |UniProt=Q8IWV1 | ||
|association_with_transcript=16bp_to_ENST00000367217_5end | |association_with_transcript=16bp_to_ENST00000367217_5end | ||
|cluster_id=chr1:203734321..203734330,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_2_at_LAX1_5end | |description=CAGE_peak_2_at_LAX1_5end | ||
|id=chr1:203734321..203734330,+ | |id=chr1:203734321..203734330,+ | ||
|ontology_enrichment_celltype=CL:0000542!8.20e-40!53;CL:0000051!8.20e-40!53;CL:0000838!4.04e-38!52;CL:0000791!3.33e-30!18;CL:0000789!3.33e-30!18;CL:0002420!3.33e-30!18;CL:0002419!3.33e-30!18;CL:0000790!3.33e-30!18;CL:0000738!9.49e-27!140;CL:0000037!6.77e-26!172;CL:0000566!6.77e-26!172;CL:0000084!9.08e-26!25;CL:0000827!9.08e-26!25;CL:0002032!3.85e-25!165;CL:0000837!3.85e-25!165;CL:0000988!1.33e-23!182;CL:0002031!1.97e-23!124;CL:0002087!1.27e-21!119;CL:0000625!1.75e-18!11;CL:0002274!9.98e-13!5;CL:0000457!9.98e-13!5;CL:0002191!9.98e-13!5;CL:0000097!9.98e-13!5;CL:0000831!9.98e-13!5;CL:0002028!9.98e-13!5;CL:0000624!6.24e-12!6;CL:0000945!6.65e-10!24;CL:0000826!6.65e-10!24;CL:0000236!1.15e-08!14;CL:0000623!4.77e-08!3;CL:0000825!4.77e-08!3;CL:0000163!8.78e-07!9;CL:0000767!9.27e-07!3 | |ontology_enrichment_celltype=CL:0000542!8.20e-40!53;CL:0000051!8.20e-40!53;CL:0000838!4.04e-38!52;CL:0000791!3.33e-30!18;CL:0000789!3.33e-30!18;CL:0002420!3.33e-30!18;CL:0002419!3.33e-30!18;CL:0000790!3.33e-30!18;CL:0000738!9.49e-27!140;CL:0000037!6.77e-26!172;CL:0000566!6.77e-26!172;CL:0000084!9.08e-26!25;CL:0000827!9.08e-26!25;CL:0002032!3.85e-25!165;CL:0000837!3.85e-25!165;CL:0000988!1.33e-23!182;CL:0002031!1.97e-23!124;CL:0002087!1.27e-21!119;CL:0000625!1.75e-18!11;CL:0002274!9.98e-13!5;CL:0000457!9.98e-13!5;CL:0002191!9.98e-13!5;CL:0000097!9.98e-13!5;CL:0000831!9.98e-13!5;CL:0002028!9.98e-13!5;CL:0000624!6.24e-12!6;CL:0000945!6.65e-10!24;CL:0000826!6.65e-10!24;CL:0000236!1.15e-08!14;CL:0000623!4.77e-08!3;CL:0000825!4.77e-08!3;CL:0000163!8.78e-07!9;CL:0000767!9.27e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.87e-45;5!CL:0000623;2.92e-26;3!CL:0000163;5.05e-25;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.90e-45,5;CL:0002028,4.90e-45,5;CL:0000623,9.40e-27,3;CL:0000825,9.40e-27,3;CL:0000163,5.07e-25,9;CL:0002031,4.63e-10,120;CL:0000838,1.25e-09,52;CL:0000542,1.98e-09,53;CL:0000051,1.98e-09,53;CL:0000738,1.26e-08,136;CL:0002032,3.23e-08,161;CL:0000837,3.23e-08,161;CL:0000037,8.91e-08,168;CL:0000988,2.92e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.75e-09!7;UBERON:0002370!3.85e-08!4;UBERON:0005058!3.85e-08!4;UBERON:0009113!3.85e-08!4;UBERON:0003295!3.85e-08!4;UBERON:0005562!3.85e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;6.32e-10;1!UBERON:0001961;6.32e-10;1!UBERON:0001744;6.32e-10;1!UBERON:0001042;6.32e-10;1!UBERON:0001735;6.32e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.07e-09,1;UBERON:0001961,1.07e-09,1;UBERON:0001744,1.07e-09,1;UBERON:0001735,1.07e-09,1 | |||
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| ||
|short_description=p2@LAX1 | |short_description=p2@LAX1 | ||
}} | }} |
Latest revision as of 23:54, 19 September 2015
Short description: | p2@LAX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LAX1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 16bp_to_ENST00000367217_5end |
EntrezGene: | LAX1 |
HGNC: | 26005 |
UniProt: | Q8IWV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.90e-45 | 5 |
basophil mast progenitor cell | 4.90e-45 | 5 |
natural killer cell | 9.40e-27 | 3 |
pro-NK cell | 9.40e-27 | 3 |
endocrine cell | 5.07e-25 | 9 |
hematopoietic lineage restricted progenitor cell | 4.63e-10 | 120 |
lymphoid lineage restricted progenitor cell | 1.25e-09 | 52 |
lymphocyte | 1.98e-09 | 53 |
common lymphoid progenitor | 1.98e-09 | 53 |
leukocyte | 1.26e-08 | 136 |
hematopoietic oligopotent progenitor cell | 3.23e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.23e-08 | 161 |
hematopoietic stem cell | 8.91e-08 | 168 |
hematopoietic cell | 2.92e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.07e-09 | 1 |
mucosa-associated lymphoid tissue | 1.07e-09 | 1 |
lymphoid tissue | 1.07e-09 | 1 |
tonsillar ring | 1.07e-09 | 1 |