FFCP PHASE1:Hg19::chr1:203734662..203734669,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54900 | |EntrezGene=54900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26005 | |HGNC=26005 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=358bp_to_ENST00000442561_5end | |association_with_transcript=358bp_to_ENST00000442561_5end | ||
|cluster_id=chr1:203734662..203734669,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_5_at_LAX1_5end | |description=CAGE_peak_5_at_LAX1_5end | ||
|id=chr1:203734662..203734669,+ | |id=chr1:203734662..203734669,+ | ||
|ontology_enrichment_celltype=CL:0002274!1.51e-42!5;CL:0000457!1.51e-42!5;CL:0002191!1.51e-42!5;CL:0000097!1.51e-42!5;CL:0000831!1.51e-42!5;CL:0002028!1.51e-42!5;CL:0000623!5.28e-26!3;CL:0000825!5.28e-26!3;CL:0000163!1.23e-23!9;CL:0000738!1.18e-22!140;CL:0002031!6.88e-21!124;CL:0000037!7.20e-20!172;CL:0000566!7.20e-20!172;CL:0002032!8.43e-19!165;CL:0000837!8.43e-19!165;CL:0000988!1.36e-18!182;CL:0000766!1.37e-13!76;CL:0002087!7.70e-13!119;CL:0000839!1.95e-12!70;CL:0000625!2.38e-12!11;CL:0000557!3.07e-12!71;CL:0000791!2.23e-11!18;CL:0000789!2.23e-11!18;CL:0002420!2.23e-11!18;CL:0002419!2.23e-11!18;CL:0000790!2.23e-11!18;CL:0000763!2.97e-10!112;CL:0000049!2.97e-10!112;CL:0000838!3.17e-09!52;CL:0000542!4.95e-09!53;CL:0000051!4.95e-09!53;CL:0000084!3.80e-08!25;CL:0000827!3.80e-08!25;CL:0000134!1.08e-07!358;CL:0002320!1.79e-07!365 | |ontology_enrichment_celltype=CL:0002274!1.51e-42!5;CL:0000457!1.51e-42!5;CL:0002191!1.51e-42!5;CL:0000097!1.51e-42!5;CL:0000831!1.51e-42!5;CL:0002028!1.51e-42!5;CL:0000623!5.28e-26!3;CL:0000825!5.28e-26!3;CL:0000163!1.23e-23!9;CL:0000738!1.18e-22!140;CL:0002031!6.88e-21!124;CL:0000037!7.20e-20!172;CL:0000566!7.20e-20!172;CL:0002032!8.43e-19!165;CL:0000837!8.43e-19!165;CL:0000988!1.36e-18!182;CL:0000766!1.37e-13!76;CL:0002087!7.70e-13!119;CL:0000839!1.95e-12!70;CL:0000625!2.38e-12!11;CL:0000557!3.07e-12!71;CL:0000791!2.23e-11!18;CL:0000789!2.23e-11!18;CL:0002420!2.23e-11!18;CL:0002419!2.23e-11!18;CL:0000790!2.23e-11!18;CL:0000763!2.97e-10!112;CL:0000049!2.97e-10!112;CL:0000838!3.17e-09!52;CL:0000542!4.95e-09!53;CL:0000051!4.95e-09!53;CL:0000084!3.80e-08!25;CL:0000827!3.80e-08!25;CL:0000134!1.08e-07!358;CL:0002320!1.79e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.49e-79;5!CL:0000163;9.75e-45;9!CL:0000151;1.65e-10;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.49e-79,5;CL:0002028,3.49e-79,5;CL:0000163,9.75e-45,9;CL:0000151,2.91e-12,36;CL:0000839,3.65e-07,66;CL:0000557,4.47e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8552!7.50e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.11e-10!80;UBERON:0001474!8.09e-10!86;UBERON:0001154!1.25e-09!1;UBERON:0001153!1.25e-09!1;UBERON:0002390!1.34e-09!102;UBERON:0003061!1.34e-09!102;UBERON:0002193!1.43e-08!112;UBERON:0004765!4.14e-08!101;UBERON:0001434!4.14e-08!101;UBERON:0002384!3.57e-07!375;UBERON:0002405!6.48e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p5@LAX1 | |short_description=p5@LAX1 | ||
}} | }} |
Latest revision as of 23:54, 19 September 2015
Short description: | p5@LAX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LAX1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 358bp_to_ENST00000442561_5end |
EntrezGene: | LAX1 |
HGNC: | 26005 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.49e-79 | 5 |
basophil mast progenitor cell | 3.49e-79 | 5 |
endocrine cell | 9.75e-45 | 9 |
secretory cell | 2.91e-12 | 36 |
myeloid lineage restricted progenitor cell | 3.65e-07 | 66 |
granulocyte monocyte progenitor cell | 4.47e-07 | 67 |