FFCP PHASE1:Hg19::chr1:36832023..36832034,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83931 | |EntrezGene=83931 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21373 | |HGNC=21373 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-350bp_to_ENST00000460417_5end | |association_with_transcript=-350bp_to_ENST00000460417_5end | ||
|cluster_id=chr1:36832023..36832034,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_20_at_STK40_5end | |description=CAGE_peak_20_at_STK40_5end | ||
|id=chr1:36832023..36832034,- | |id=chr1:36832023..36832034,- | ||
|ontology_enrichment_celltype=CL:0000738!1.20e-17!140;CL:0000775!2.35e-17!3;CL:0000094!2.56e-17!8;CL:0000766!5.34e-16!76;CL:0000037!2.28e-13!172;CL:0000566!2.28e-13!172;CL:0002057!8.25e-13!42;CL:0000081!1.61e-12!11;CL:0000988!2.44e-12!182;CL:0000771!2.84e-12!2;CL:0000860!8.16e-12!45;CL:0002087!3.27e-11!119;CL:0002032!2.78e-10!165;CL:0000837!2.78e-10!165;CL:0000763!1.01e-09!112;CL:0000049!1.01e-09!112;CL:0002393!1.10e-09!9;CL:0002397!1.10e-09!9;CL:0002194!3.30e-09!63;CL:0000576!3.30e-09!63;CL:0000040!3.30e-09!63;CL:0000559!3.30e-09!63;CL:0002009!7.37e-09!65;CL:0000842!3.68e-08!3;CL:0002031!4.25e-08!124;CL:0000839!4.50e-08!70;CL:0000557!6.27e-08!71;CL:0000623!1.23e-07!3;CL:0000825!1.23e-07!3 | |ontology_enrichment_celltype=CL:0000738!1.20e-17!140;CL:0000775!2.35e-17!3;CL:0000094!2.56e-17!8;CL:0000766!5.34e-16!76;CL:0000037!2.28e-13!172;CL:0000566!2.28e-13!172;CL:0002057!8.25e-13!42;CL:0000081!1.61e-12!11;CL:0000988!2.44e-12!182;CL:0000771!2.84e-12!2;CL:0000860!8.16e-12!45;CL:0002087!3.27e-11!119;CL:0002032!2.78e-10!165;CL:0000837!2.78e-10!165;CL:0000763!1.01e-09!112;CL:0000049!1.01e-09!112;CL:0002393!1.10e-09!9;CL:0002397!1.10e-09!9;CL:0002194!3.30e-09!63;CL:0000576!3.30e-09!63;CL:0000040!3.30e-09!63;CL:0000559!3.30e-09!63;CL:0002009!7.37e-09!65;CL:0000842!3.68e-08!3;CL:0002031!4.25e-08!124;CL:0000839!4.50e-08!70;CL:0000557!6.27e-08!71;CL:0000623!1.23e-07!3;CL:0000825!1.23e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;3.90e-88;8!CL:0000775;1.28e-84;3!CL:0000081;2.63e-64;11!CL:0000771;1.13e-57;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.90e-88,8;CL:0000775,1.28e-84,3;CL:0000081,2.63e-64,11;CL:0000771,1.13e-57,2;CL:0000766,4.48e-10,72;CL:0000763,7.91e-07,108;CL:0000049,7.91e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.31e-11!102;UBERON:0003061!6.31e-11!102;UBERON:0002193!1.23e-09!112;UBERON:0000178!6.84e-09!15;UBERON:0000179!6.84e-09!15;UBERON:0000463!6.84e-09!15;UBERON:0002371!8.49e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.85e-08;15!UBERON:0000179;1.85e-08;15!UBERON:0000463;1.85e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.85e-08,15;UBERON:0000179,1.85e-08,15;UBERON:0000463,1.85e-08,15 | |||
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|short_description=p20@STK40 | |short_description=p20@STK40 | ||
}} | }} |
Latest revision as of 21:00, 17 September 2015
Short description: | p20@STK40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_STK40_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -350bp_to_ENST00000460417_5end |
EntrezGene: | STK40 |
HGNC: | 21373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.90e-88 | 8 |
neutrophil | 1.28e-84 | 3 |
blood cell | 2.63e-64 | 11 |
eosinophil | 1.13e-57 | 2 |
myeloid leukocyte | 4.48e-10 | 72 |
myeloid cell | 7.91e-07 | 108 |
common myeloid progenitor | 7.91e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 1.85e-08 | 15 |
haemolymphatic fluid | 1.85e-08 | 15 |
organism substance | 1.85e-08 | 15 |